SNP Links for Nucleotide (Select 611435042) - SNP

Links from Nucleotide

Items: 1 to 20 of 283

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Select item 14893807971.

rs1489380797 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:141649072 (GRCh38)
X:140737202 (GRCh37)
Canonical SPDI:: NC_000023.11:141649071:T:C
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
HGVS:: NC_000023.11:g.141649072T>C, NW_004070888.1:g.744875T>C, NC_000023.10:g.140737202T>C, NR_037183.2:n.831T>C, NR_037183.1:n.846T>C

Select item 14862725262.

rs1486272526 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: X:141502918 (GRCh38)
X:140590912 (GRCh37)
Canonical SPDI:: NC_000023.11:141502917:C:G
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000019/2 (GnomAD)
HGVS:: NC_000023.11:g.141502918C>G, NW_004070888.1:g.598721C>G, NC_000023.10:g.140590912C>G, NR_037183.2:n.70C>G, NR_037183.1:n.70C>G

Select item 14856396493.

rs1485639649 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:141503038 (GRCh38)
X:140591032 (GRCh37)
Canonical SPDI:: NC_000023.11:141503037:G:A
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000023.11:g.141503038G>A, NW_004070888.1:g.598841G>A, NC_000023.10:g.140591032G>A, NR_037183.2:n.190G>A, NR_037183.1:n.190G>A

Select item 14826745734.

rs1482674573 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:141649311 (GRCh38)
X:140737441 (GRCh37)
Canonical SPDI:: NC_000023.11:141649310:T:C
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.141649311T>C, NW_004070888.1:g.745114T>C, NC_000023.10:g.140737441T>C, NR_037183.2:n.1070T>C, NR_037183.1:n.1085T>C

Select item 14814164145.

rs1481416414 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: X:141503098 (GRCh38)
X:140591107 (GRCh37)
Canonical SPDI:: NC_000023.11:141503097:C:G,NC_000023.11:141503097:C:T
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.00008/1 (ALFA)
T=0.0001/2 (TOMMO)
HGVS:: NC_000023.11:g.141503098C>G, NC_000023.11:g.141503098C>T, NW_004070888.1:g.598901C>G, NW_004070888.1:g.598901C>T, NC_000023.10:g.140591107C>G, NC_000023.10:g.140591107C>T, NR_037183.2:n.250C>G, NR_037183.2:n.250C>T, NR_037183.1:n.265C>G, NR_037183.1:n.265C>T

Select item 14798984796.

rs1479898479 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: X:141503045 (GRCh38)
X:140591039 (GRCh37)
Canonical SPDI:: NC_000023.11:141503044:G:A,NC_000023.11:141503044:G:C
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000023.11:g.141503045G>A, NC_000023.11:g.141503045G>C, NW_004070888.1:g.598848G>A, NW_004070888.1:g.598848G>C, NC_000023.10:g.140591039G>A, NC_000023.10:g.140591039G>C, NR_037183.2:n.197G>A, NR_037183.2:n.197G>C, NR_037183.1:n.197G>A, NR_037183.1:n.197G>C

Select item 14753684927.

rs1475368492 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: X:141514789 (GRCh38)
X:140602844 (GRCh37)
Canonical SPDI:: NC_000023.11:141514788:C:G,NC_000023.11:141514788:C:T
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000004/1 (TOPMED)
T=0.00002/2 (GnomAD)
T=0.000547/7 (TOMMO)
T=0.000624/3 (1000Genomes)
T=0.000701/2 (KOREAN)
HGVS:: NC_000023.11:g.141514789C>G, NC_000023.11:g.141514789C>T, NW_004070888.1:g.610592C>G, NW_004070888.1:g.610592C>T, NC_000023.10:g.140602844C>G, NC_000023.10:g.140602844C>T, NR_037183.2:n.469C>G, NR_037183.2:n.469C>T, NR_037183.1:n.484C>G, NR_037183.1:n.484C>T

Select item 14749620248.

rs1474962024 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:141503084 (GRCh38)
X:140591078 (GRCh37)
Canonical SPDI:: NC_000023.11:141503083:A:G
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.01256/149 (ALFA)
HGVS:: NC_000023.11:g.141503084A>G, NW_004070888.1:g.598887A>G, NC_000023.10:g.140591078A>G, NR_037183.2:n.236A>G, NR_037183.1:n.236A>G

Select item 14699648769.

rs1469964876 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:141502856 (GRCh38)
X:140590850 (GRCh37)
Canonical SPDI:: NC_000023.11:141502855:A:G
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000009/1 (GnomAD)
HGVS:: NC_000023.11:g.141502856A>G, NW_004070888.1:g.598659A>G, NC_000023.10:g.140590850A>G, NR_037183.2:n.8A>G, NR_037183.1:n.8A>G

Select item 146774189110.

rs1467741891 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: X:141649373 (GRCh38)
X:140737503 (GRCh37)
Canonical SPDI:: NC_000023.11:141649372:C:G
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000023.11:g.141649373C>G, NW_004070888.1:g.745176C>G, NC_000023.10:g.140737503C>G, NR_037183.2:n.1132C>G, NR_037183.1:n.1147C>G

Select item 146694674411.

rs1466946744 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: X:141648940 (GRCh38)
X:140737070 (GRCh37)
Canonical SPDI:: NC_000023.11:141648939:G:C,NC_000023.11:141648939:G:T
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.141648940G>C, NC_000023.11:g.141648940G>T, NW_004070888.1:g.744743G>C, NW_004070888.1:g.744743G>T, NC_000023.10:g.140737070G>C, NC_000023.10:g.140737070G>T, NR_037183.2:n.699G>C, NR_037183.2:n.699G>T, NR_037183.1:n.714G>C, NR_037183.1:n.714G>T

Select item 146592345012.

rs1465923450 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: X:141649628 (GRCh38)
X:140737758 (GRCh37)
Canonical SPDI:: NC_000023.11:141649627:T:C,NC_000023.11:141649627:T:G
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.141649628T>C, NC_000023.11:g.141649628T>G, NW_004070888.1:g.745431T>C, NW_004070888.1:g.745431T>G, NC_000023.10:g.140737758T>C, NC_000023.10:g.140737758T>G, NR_037183.2:n.1387T>C, NR_037183.2:n.1387T>G, NR_037183.1:n.1402T>C, NR_037183.1:n.1402T>G

Select item 146385776713.

rs1463857767 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: X:141514775 (GRCh38)
X:140602830 (GRCh37)
Canonical SPDI:: NC_000023.11:141514774:C:G
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.00003/3 (GnomAD)
HGVS:: NC_000023.11:g.141514775C>G, NW_004070888.1:g.610578C>G, NC_000023.10:g.140602830C>G, NR_037183.2:n.455C>G, NR_037183.1:n.470C>G

Select item 146270983114.

rs1462709831 has merged into rs1298496593 [Homo sapiens]

Variant type:: DELINS
Alleles:: GTGGTGGACG>-,GTGGTGGACGGTGGTGGACG [Show Flanks]
Chromosome:: X:141503087 (GRCh38)
X:11 (GRCh37)
Canonical SPDI:: NC_000023.11:141503074:CGGTGGTGGACGGTGGTGGACG:CGGTGGTGGACG,NC_000023.11:141503074:CGGTGGTGGACGGTGGTGGACG:CGGTGGTGGACGGTGGTGGACGGTGGTGGACG
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CGGTGGTGGACGGTGGTGGACGGTGGTGGACG=0./0 (ALFA)
-=0.00104/5 (1000Genomes)
HGVS:: NC_000023.11:g.141503077GTGGTGGACG[1], NC_000023.11:g.141503077GTGGTGGACG[3], NW_004070888.1:g.598880GTGGTGGACG[1], NW_004070888.1:g.598880GTGGTGGACG[3], NR_037183.2:n.229GTGGTGGACG[1], NR_037183.2:n.229GTGGTGGACG[3]

Select item 146110171015.

rs1461101710 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: X:141503133 (GRCh38)
X:140591142 (GRCh37)
Canonical SPDI:: NC_000023.11:141503132:G:A,NC_000023.11:141503132:G:C
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000023.11:g.141503133G>A, NC_000023.11:g.141503133G>C, NW_004070888.1:g.598936G>A, NW_004070888.1:g.598936G>C, NC_000023.10:g.140591142G>A, NC_000023.10:g.140591142G>C, NR_037183.2:n.285G>A, NR_037183.2:n.285G>C, NR_037183.1:n.300G>A, NR_037183.1:n.300G>C

Select item 145956302816.

rs1459563028 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->ACCGG,ACGGCCTTCGGCGG,AGGGTGTTGAGCGG [Show Flanks]
Chromosome:: X:141503084 (GRCh38)
X:140591079 (GRCh37)
Canonical SPDI:: NC_000023.11:141503084:CGG:CGGACCGG,NC_000023.11:141503084:CGG:CGGACGGCCTTCGGCGG,NC_000023.11:141503084:CGG:CGGAGGGTGTTGAGCGG
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CGGAGGGTGTTGAGCGG=0./0 (ALFA)
CGGAGGGTGTTGAG=0.00008/3 (GnomAD)
CGGAGGGTGTTGAG=0.00016/3 (TOMMO)
HGVS:: NC_000023.11:g.141503087_141503088insACCGG, NC_000023.11:g.141503087_141503088insACGGCCTTCGGCGG, NC_000023.11:g.141503087_141503088insAGGGTGTTGAGCGG, NW_004070888.1:g.598890_598891insACCGG, NW_004070888.1:g.598890_598891insACGGCCTTCGGCGG, NW_004070888.1:g.598890_598891insAGGGTGTTGAGCGG, NC_000023.10:g.140591095_140591096insACCGG, NC_000023.10:g.140591082_140591095dup, NC_000023.10:g.140591095_140591096insAGGGTGTTGAGCGG, NR_037183.2:n.239_240insACCGG, NR_037183.2:n.239_240insACGGCCTTCGGCGG, NR_037183.2:n.239_240insAGGGTGTTGAGCGG, NR_037183.1:n.237_241dup, NR_037183.1:n.240_253dup, NR_037183.1:n.240_241insGGGTGTTGAGCGGA

Select item 145578426117.

rs1455784261 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: X:141503198 (GRCh38)
X:140591207 (GRCh37)
Canonical SPDI:: NC_000023.11:141503197:C:G,NC_000023.11:141503197:C:T
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00066/7 (TOMMO)
T=0.0075/16 (KOREAN)
HGVS:: NC_000023.11:g.141503198C>G, NC_000023.11:g.141503198C>T, NW_004070888.1:g.599001C>G, NW_004070888.1:g.599001C>T, NC_000023.10:g.140591207C>G, NC_000023.10:g.140591207C>T, NR_037183.2:n.350C>G, NR_037183.2:n.350C>T, NR_037183.1:n.365C>G, NR_037183.1:n.365C>T

Select item 145576131518.

rs1455761315 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G,T [Show Flanks]
Chromosome:: X:141502904 (GRCh38)
X:140590898 (GRCh37)
Canonical SPDI:: NC_000023.11:141502903:A:C,NC_000023.11:141502903:A:G,NC_000023.11:141502903:A:T
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
T=0.000029/3 (GnomAD)
G=0.000921/2 (KOREAN)
HGVS:: NC_000023.11:g.141502904A>C, NC_000023.11:g.141502904A>G, NC_000023.11:g.141502904A>T, NW_004070888.1:g.598707A>C, NW_004070888.1:g.598707A>G, NW_004070888.1:g.598707A>T, NC_000023.10:g.140590898A>C, NC_000023.10:g.140590898A>G, NC_000023.10:g.140590898A>T, NR_037183.2:n.56A>C, NR_037183.2:n.56A>G, NR_037183.2:n.56A>T, NR_037183.1:n.56A>C, NR_037183.1:n.56A>G, NR_037183.1:n.56A>T

Select item 145445834119.

rs1454458341 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: X:141503206 (GRCh38)
X:140591215 (GRCh37)
Canonical SPDI:: NC_000023.11:141503205:T:G
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.02293/354 (ALFA)
T=0./0 (SGDP_PRJ)
G=0.00569/131 (GnomAD)
G=0.0068/71 (TOMMO)
G=0.06478/135 (KOREAN)
HGVS:: NC_000023.11:g.141503206T>G, NW_004070888.1:g.599009T>G, NC_000023.10:g.140591215T>G, NR_037183.2:n.358T>G, NR_037183.1:n.373T>G

Select item 145377499120.

rs1453774991 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: X:141502892 (GRCh38)
X:140590886 (GRCh37)
Canonical SPDI:: NC_000023.11:141502891:C:A,NC_000023.11:141502891:C:G,NC_000023.11:141502891:C:T
Gene:: SPANXA2-OT1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.141502892C>A, NC_000023.11:g.141502892C>G, NC_000023.11:g.141502892C>T, NW_004070888.1:g.598695C>A, NW_004070888.1:g.598695C>G, NW_004070888.1:g.598695C>T, NC_000023.10:g.140590886C>A, NC_000023.10:g.140590886C>G, NC_000023.10:g.140590886C>T, NR_037183.2:n.44C>A, NR_037183.2:n.44C>G, NR_037183.2:n.44C>T, NR_037183.1:n.44C>A, NR_037183.1:n.44C>G, NR_037183.1:n.44C>T

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