SNP Links for Nucleotide (Select 634743339) - SNP

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Links from Nucleotide

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Select item 14869990921.

rs1486999092 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:112272915 (GRCh38)
13:112927229 (GRCh37)
Canonical SPDI:: NC_000013.11:112272914:C:T
Gene:: LOC101928730 (Varview), LOC107984555 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.112272915C>T, NC_000013.10:g.112927229C>T, NT_187592.1:g.90033C>T, NR_120422.1:n.86G>A

Select item 14847034582.

rs1484703458 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 13:112256752 (GRCh38)
13:112911066 (GRCh37)
Canonical SPDI:: NC_000013.11:112256751:G:T
Gene:: LOC101928730 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.00033/5 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
T=0.000893/4 (Estonian)
HGVS:: NC_000013.11:g.112256752G>T, NT_187592.1:g.73878G>T, NC_000013.10:g.112911066G>T, NR_120422.1:n.1911C>A

Select item 14844723023.

rs1484472302 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 13:112259784 (GRCh38)
13:112914098 (GRCh37)
Canonical SPDI:: NC_000013.11:112259783:G:A,NC_000013.11:112259783:G:T
Gene:: LOC101928730 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.112259784G>A, NC_000013.11:g.112259784G>T, NT_187592.1:g.76910G>A, NT_187592.1:g.76910G>T, NC_000013.10:g.112914098G>A, NC_000013.10:g.112914098G>T, NR_120422.1:n.1454C>T, NR_120422.1:n.1454C>A

Select item 14814144624.

rs1481414462 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:112262294 (GRCh38)
13:112916608 (GRCh37)
Canonical SPDI:: NC_000013.11:112262293:A:G
Gene:: LOC101928730 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.112262294A>G, NT_187592.1:g.79420A>G, NC_000013.10:g.112916608A>G, NR_120422.1:n.1182T>C

Select item 14766828785.

rs1476682878 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 13:112272990 (GRCh38)
13:112927304 (GRCh37)
Canonical SPDI:: NC_000013.11:112272989:C:A
Gene:: LOC101928730 (Varview), LOC107984555 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.112272990C>A, NC_000013.10:g.112927304C>A, NT_187592.1:g.90108C>A, NR_120422.1:n.11G>T

Select item 14756719376.

rs1475671937 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:112272485 (GRCh38)
13:112926799 (GRCh37)
Canonical SPDI:: NC_000013.11:112272484:G:A
Gene:: LOC101928730 (Varview), LOC107984555 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000013.11:g.112272485G>A, NC_000013.10:g.112926799G>A, NT_187592.1:g.89603G>A, NR_120422.1:n.516C>T

Select item 14726948647.

rs1472694864 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 13:112262218 (GRCh38)
13:112916532 (GRCh37)
Canonical SPDI:: NC_000013.11:112262217:C:G
Gene:: LOC101928730 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.112262218C>G, NT_187592.1:g.79344C>G, NC_000013.10:g.112916532C>G, NR_120422.1:n.1258G>C

Select item 14708610968.

rs1470861096 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 13:112257153 (GRCh38)
13:112911467 (GRCh37)
Canonical SPDI:: NC_000013.11:112257152:G:T
Gene:: LOC101928730 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000084/1 (ALFA)
T=0.000019/5 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000013.11:g.112257153G>T, NT_187592.1:g.74279G>T, NC_000013.10:g.112911467G>T, NR_120422.1:n.1638C>A

Select item 14693263489.

rs1469326348 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:112272793 (GRCh38)
13:112927107 (GRCh37)
Canonical SPDI:: NC_000013.11:112272792:A:G
Gene:: LOC101928730 (Varview), LOC107984555 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.112272793A>G, NC_000013.10:g.112927107A>G, NT_187592.1:g.89911A>G, NR_120422.1:n.208T>C

Select item 146818633810.

rs1468186338 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 13:112259731 (GRCh38)
13:112914045 (GRCh37)
Canonical SPDI:: NC_000013.11:112259730:G:T
Gene:: LOC101928730 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.112259731G>T, NT_187592.1:g.76857G>T, NC_000013.10:g.112914045G>T, NR_120422.1:n.1507C>A

Select item 146744993511.

rs1467449935 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 13:112259723 (GRCh38)
13:112914037 (GRCh37)
Canonical SPDI:: NC_000013.11:112259722:C:A
Gene:: LOC101928730 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.112259723C>A, NT_187592.1:g.76849C>A, NC_000013.10:g.112914037C>A, NR_120422.1:n.1515G>T

Select item 146138816812.

rs1461388168 [Homo sapiens]

Variant type:: DEL
Alleles:: GTC>- [Show Flanks]
Chromosome:: 13:112272339 (GRCh38)
13:112926653 (GRCh37)
Canonical SPDI:: NC_000013.11:112272338:GTC:
Gene:: LOC101928730 (Varview), LOC107984555 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.112272339_112272341del, NC_000013.10:g.112926653_112926655del, NT_187592.1:g.89457_89459del, NR_120422.1:n.660_662del

Select item 146034982513.

rs1460349825 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 13:112272504 (GRCh38)
13:112926818 (GRCh37)
Canonical SPDI:: NC_000013.11:112272503:C:G,NC_000013.11:112272503:C:T
Gene:: LOC101928730 (Varview), LOC107984555 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0./0 (GnomAD)
T=0.000011/3 (TOPMED)
T=0.000035/1 (TOMMO)
HGVS:: NC_000013.11:g.112272504C>G, NC_000013.11:g.112272504C>T, NC_000013.10:g.112926818C>G, NC_000013.10:g.112926818C>T, NT_187592.1:g.89622C>G, NT_187592.1:g.89622C>T, NR_120422.1:n.497G>C, NR_120422.1:n.497G>A

Select item 145782251214.

rs1457822512 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:112271501 (GRCh38)
13:112925815 (GRCh37)
Canonical SPDI:: NC_000013.11:112271500:C:T
Gene:: LOC101928730 (Varview), LOC107984555 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000013.11:g.112271501C>T, NC_000013.10:g.112925815C>T, NT_187592.1:g.88627C>T, NR_120422.1:n.838G>A

Select item 145726203215.

rs1457262032 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:112262289 (GRCh38)
13:112916603 (GRCh37)
Canonical SPDI:: NC_000013.11:112262288:C:T
Gene:: LOC101928730 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.112262289C>T, NT_187592.1:g.79415C>T, NC_000013.10:g.112916603C>T, NR_120422.1:n.1187G>A

Select item 145547492016.

rs1455474920 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 13:112272366 (GRCh38)
13:112926680 (GRCh37)
Canonical SPDI:: NC_000013.11:112272365:C:G
Gene:: LOC101928730 (Varview), LOC107984555 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.112272366C>G, NC_000013.10:g.112926680C>G, NT_187592.1:g.89484C>G, NR_120422.1:n.635G>C

Select item 145498446717.

rs1454984467 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 13:112272771 (GRCh38)
13:112927085 (GRCh37)
Canonical SPDI:: NC_000013.11:112272770:A:C
Gene:: LOC101928730 (Varview), LOC107984555 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.112272771A>C, NC_000013.10:g.112927085A>C, NT_187592.1:g.89889A>C, NR_120422.1:n.230T>G

Select item 145364997118.

rs1453649971 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 13:112272948 (GRCh38)
13:112927262 (GRCh37)
Canonical SPDI:: NC_000013.11:112272947:G:T
Gene:: LOC101928730 (Varview), LOC107984555 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000023/6 (TOPMED)
T=0.00005/7 (GnomAD)
HGVS:: NC_000013.11:g.112272948G>T, NC_000013.10:g.112927262G>T, NT_187592.1:g.90066G>T, NR_120422.1:n.53C>A

Select item 145238936619.

rs1452389366 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 13:112271525 (GRCh38)
13:112925839 (GRCh37)
Canonical SPDI:: NC_000013.11:112271524:G:T
Gene:: LOC101928730 (Varview), LOC107984555 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.112271525G>T, NC_000013.10:g.112925839G>T, NT_187592.1:g.88651G>T, NR_120422.1:n.814C>A

Select item 145131352820.

rs1451313528 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:112262977 (GRCh38)
13:112917291 (GRCh37)
Canonical SPDI:: NC_000013.11:112262976:G:A
Gene:: LOC101928730 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000023/6 (TOPMED)
HGVS:: NC_000013.11:g.112262977G>A, NT_187592.1:g.80103G>A, NC_000013.10:g.112917291G>A, NR_120422.1:n.1146C>T