SNP Links for Nucleotide (Select 667751630) - SNP

Links from Nucleotide

Items: 1 to 20 of 165

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Select item 14896336811.

rs1489633681 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:194204874 (GRCh38)
3:193922663 (GRCh37)
Canonical SPDI:: NC_000003.12:194204873:A:G
Gene:: LINC02036 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.0002/1 (ALFA)
G=0.0002/1 (Estonian)
HGVS:: NC_000003.12:g.194204874A>G, NC_000003.11:g.193922663A>G, NR_125403.1:n.191T>C, NR_125404.1:n.153T>C

Select item 14880182332.

rs1488018233 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 3:194203583 (GRCh38)
3:193921372 (GRCh37)
Canonical SPDI:: NC_000003.12:194203582:C:G,NC_000003.12:194203582:C:T
Gene:: LINC02036 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000003.12:g.194203583C>G, NC_000003.12:g.194203583C>T, NC_000003.11:g.193921372C>G, NC_000003.11:g.193921372C>T, NR_125403.1:n.343G>C, NR_125403.1:n.343G>A, NR_125404.1:n.305G>C, NR_125404.1:n.305G>A

Select item 14872810233.

rs1487281023 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:194203026 (GRCh38)
3:193920815 (GRCh37)
Canonical SPDI:: NC_000003.12:194203025:C:T
Gene:: LINC02036 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000035/1 (TOMMO)
HGVS:: NC_000003.12:g.194203026C>T, NC_000003.11:g.193920815C>T, NR_125403.1:n.900G>A, NR_125404.1:n.862G>A

Select item 14820286054.

rs1482028605 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:194250122 (GRCh38)
3:193967911 (GRCh37)
Canonical SPDI:: NC_000003.12:194250121:C:T
Gene:: LINC02036 (Varview), LINC02037 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
T=0.000106/2 (TOMMO)
HGVS:: NC_000003.12:g.194250122C>T, NC_000003.11:g.193967911C>T, NR_125403.1:n.32G>A

Select item 14767755955.

rs1476775595 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 3:194203269 (GRCh38)
3:193921058 (GRCh37)
Canonical SPDI:: NC_000003.12:194203268:A:C
Gene:: LINC02036 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.194203269A>C, NC_000003.11:g.193921058A>C, NR_125403.1:n.657T>G, NR_125404.1:n.619T>G

Select item 14736362796.

rs1473636279 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:194203260 (GRCh38)
3:193921049 (GRCh37)
Canonical SPDI:: NC_000003.12:194203259:C:T
Gene:: LINC02036 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.194203260C>T, NC_000003.11:g.193921049C>T, NR_125403.1:n.666G>A, NR_125404.1:n.628G>A

Select item 14713782517.

rs1471378251 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:194203437 (GRCh38)
3:193921226 (GRCh37)
Canonical SPDI:: NC_000003.12:194203436:A:G
Gene:: LINC02036 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000029/4 (GnomAD)
HGVS:: NC_000003.12:g.194203437A>G, NC_000003.11:g.193921226A>G, NR_125403.1:n.489T>C, NR_125404.1:n.451T>C

Select item 14686112208.

rs1468611220 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:194203069 (GRCh38)
3:193920858 (GRCh37)
Canonical SPDI:: NC_000003.12:194203068:A:G
Gene:: LINC02036 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000066/1 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.194203069A>G, NC_000003.11:g.193920858A>G, NR_125403.1:n.857T>C, NR_125404.1:n.819T>C

Select item 14602075969.

rs1460207596 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:194203678 (GRCh38)
3:193921467 (GRCh37)
Canonical SPDI:: NC_000003.12:194203677:G:A
Gene:: LINC02036 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000035/1 (TOMMO)
HGVS:: NC_000003.12:g.194203678G>A, NC_000003.11:g.193921467G>A, NR_125403.1:n.248C>T, NR_125404.1:n.210C>T

Select item 145375258710.

rs1453752587 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:194250098 (GRCh38)
3:193967887 (GRCh37)
Canonical SPDI:: NC_000003.12:194250097:C:T
Gene:: LINC02036 (Varview), LINC02037 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000021/3 (GnomAD)
HGVS:: NC_000003.12:g.194250098C>T, NC_000003.11:g.193967887C>T, NR_125403.1:n.56G>A

Select item 145318771811.

rs1453187718 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>- [Show Flanks]
Chromosome:: 3:194203119 (GRCh38)
3:193920908 (GRCh37)
Canonical SPDI:: NC_000003.12:194203117:TTT:T
Gene:: LINC02036 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000003.12:g.194203119_194203120del, NC_000003.11:g.193920908_193920909del, NR_125403.1:n.807_808del, NR_125404.1:n.769_770del

Select item 145035814712.

rs1450358147 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 3:194204921 (GRCh38)
3:193922710 (GRCh37)
Canonical SPDI:: NC_000003.12:194204920:G:C
Gene:: LINC02036 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.194204921G>C, NC_000003.11:g.193922710G>C, NR_125403.1:n.144C>G, NR_125404.1:n.106C>G

Select item 144115960213.

rs1441159602 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAGTCT>- [Show Flanks]
Chromosome:: 3:194203446 (GRCh38)
3:193921235 (GRCh37)
Canonical SPDI:: NC_000003.12:194203443:CTAAAGTCT:CT
Gene:: LINC02036 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CT=0./0 (ALFA)
-=0.000021/3 (GnomAD)
-=0.000026/7 (TOPMED)
HGVS:: NC_000003.12:g.194203446_194203452del, NC_000003.11:g.193921235_193921241del, NR_125403.1:n.476_482del, NR_125404.1:n.438_444del

Select item 143419325814.

rs1434193258 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:194250061 (GRCh38)
3:193967850 (GRCh37)
Canonical SPDI:: NC_000003.12:194250060:A:G
Gene:: LINC02036 (Varview), LINC02037 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.194250061A>G, NC_000003.11:g.193967850A>G, NR_125403.1:n.93T>C

Select item 142066558915.

rs1420665589 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 3:194203576 (GRCh38)
3:193921365 (GRCh37)
Canonical SPDI:: NC_000003.12:194203575:C:G,NC_000003.12:194203575:C:T
Gene:: LINC02036 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
T=0.000035/1 (TOMMO)
HGVS:: NC_000003.12:g.194203576C>G, NC_000003.12:g.194203576C>T, NC_000003.11:g.193921365C>G, NC_000003.11:g.193921365C>T, NR_125403.1:n.350G>C, NR_125403.1:n.350G>A, NR_125404.1:n.312G>C, NR_125404.1:n.312G>A

Select item 141702275616.

rs1417022756 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:194204834 (GRCh38)
3:193922623 (GRCh37)
Canonical SPDI:: NC_000003.12:194204833:C:T
Gene:: LINC02036 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.194204834C>T, NC_000003.11:g.193922623C>T, NR_125403.1:n.231G>A, NR_125404.1:n.193G>A

Select item 141266871317.

rs1412668713 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 3:194203410 (GRCh38)
3:193921199 (GRCh37)
Canonical SPDI:: NC_000003.12:194203409:G:T
Gene:: LINC02036 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.194203410G>T, NC_000003.11:g.193921199G>T, NR_125403.1:n.516C>A, NR_125404.1:n.478C>A

Select item 140922407618.

rs1409224076 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 3:194203557 (GRCh38)
3:193921346 (GRCh37)
Canonical SPDI:: NC_000003.12:194203556:C:G
Gene:: LINC02036 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.194203557C>G, NC_000003.11:g.193921346C>G, NR_125403.1:n.369G>C, NR_125404.1:n.331G>C

Select item 140857054219.

rs1408570542 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:194203089 (GRCh38)
3:193920878 (GRCh37)
Canonical SPDI:: NC_000003.12:194203088:G:A
Gene:: LINC02036 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000003.12:g.194203089G>A, NC_000003.11:g.193920878G>A, NR_125403.1:n.837C>T, NR_125404.1:n.799C>T

Select item 140703593820.

rs1407035938 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 3:194250070 (GRCh38)
3:193967859 (GRCh37)
Canonical SPDI:: NC_000003.12:194250069:C:G,NC_000003.12:194250069:C:T
Gene:: LINC02036 (Varview), LINC02037 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
T=0./0 (KOREAN)
G=0.000011/3 (TOPMED)
G=0.000021/3 (GnomAD)
T=0.000071/1 (TOMMO)
HGVS:: NC_000003.12:g.194250070C>G, NC_000003.12:g.194250070C>T, NC_000003.11:g.193967859C>G, NC_000003.11:g.193967859C>T, NR_125403.1:n.84G>C, NR_125403.1:n.84G>A

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