SNP Links for Nucleotide (Select 66879661) - SNP

Links from Nucleotide

Items: 1 to 20 of 576

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Select item 14901489251.

rs1490148925 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:228083253 (GRCh38)
1:228270954 (GRCh37)
Canonical SPDI:: NC_000001.11:228083252:C:G
Gene:: ARF1 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.228083253C>G, NC_000001.10:g.228270954C>G, NM_001024228.2:c.-137C>G, NM_001024228.1:c.-137C>G, NM_001024227.1:c.-159C>G

Select item 14894309552.

rs1489430955 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:228098469 (GRCh38)
1:228286170 (GRCh37)
Canonical SPDI:: NC_000001.11:228098468:G:A
Gene:: ARF1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.228098469G>A, NC_000001.10:g.228286170G>A, NG_082363.1:g.1334G>A, NM_001658.4:c.*456G>A, NM_001658.3:c.*456G>A, NM_001024228.2:c.*456G>A, NM_001024228.1:c.*456G>A, NM_001024226.2:c.*456G>A, NM_001024226.1:c.*456G>A, NM_001024227.1:c.*456G>A

Select item 14886656623.

rs1488665662 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CG [Show Flanks]
Chromosome:: 1:228083229 (GRCh38)
1:228270931 (GRCh37)
Canonical SPDI:: NC_000001.11:228083229:GCG:GCGCG
Gene:: ARF1 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GCGCG=0./0 (ALFA)
GC=0.000021/3 (GnomAD)
GC=0.00003/8 (TOPMED)
HGVS:: NC_000001.11:g.228083231_228083232dup, NC_000001.10:g.228270932_228270933dup, NM_001024228.2:c.-159_-158dup, NM_001024228.1:c.-159_-158dup, NM_001024227.1:c.-181_-180dup

Select item 14884641244.

rs1488464124 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:228098439 (GRCh38)
1:228286140 (GRCh37)
Canonical SPDI:: NC_000001.11:228098438:T:A
Gene:: ARF1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.228098439T>A, NC_000001.10:g.228286140T>A, NG_082363.1:g.1304T>A, NM_001658.4:c.*426T>A, NM_001658.3:c.*426T>A, NM_001024228.2:c.*426T>A, NM_001024228.1:c.*426T>A, NM_001024226.2:c.*426T>A, NM_001024226.1:c.*426T>A, NM_001024227.1:c.*426T>A

Select item 14874850605.

rs1487485060 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:228099108 (GRCh38)
1:228286809 (GRCh37)
Canonical SPDI:: NC_000001.11:228099107:T:C
Gene:: ARF1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.228099108T>C, NC_000001.10:g.228286809T>C, NM_001658.4:c.*1095T>C, NM_001658.3:c.*1095T>C, NM_001024228.2:c.*1095T>C, NM_001024228.1:c.*1095T>C, NM_001024226.2:c.*1095T>C, NM_001024226.1:c.*1095T>C, NM_001024227.1:c.*1095T>C

Select item 14873145946.

rs1487314594 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:228098990 (GRCh38)
1:228286691 (GRCh37)
Canonical SPDI:: NC_000001.11:228098989:A:C
Gene:: ARF1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.228098990A>C, NC_000001.10:g.228286691A>C, NM_001658.4:c.*977A>C, NM_001658.3:c.*977A>C, NM_001024228.2:c.*977A>C, NM_001024228.1:c.*977A>C, NM_001024226.2:c.*977A>C, NM_001024226.1:c.*977A>C, NM_001024227.1:c.*977A>C

Select item 14872443747.

rs1487244374 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:228098277 (GRCh38)
1:228285978 (GRCh37)
Canonical SPDI:: NC_000001.11:228098276:T:C
Gene:: ARF1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.228098277T>C, NC_000001.10:g.228285978T>C, NG_082363.1:g.1142T>C, NM_001658.4:c.*264T>C, NM_001658.3:c.*264T>C, NM_001024228.2:c.*264T>C, NM_001024228.1:c.*264T>C, NM_001024226.2:c.*264T>C, NM_001024226.1:c.*264T>C, NM_001024227.1:c.*264T>C

Select item 14853442918.

rs1485344291 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:228098170 (GRCh38)
1:228285871 (GRCh37)
Canonical SPDI:: NC_000001.11:228098169:G:C
Gene:: ARF1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.228098170G>C, NC_000001.10:g.228285871G>C, NG_082363.1:g.1035G>C, NM_001658.4:c.*157G>C, NM_001658.3:c.*157G>C, NM_001024228.2:c.*157G>C, NM_001024228.1:c.*157G>C, NM_001024226.2:c.*157G>C, NM_001024226.1:c.*157G>C, NM_001024227.1:c.*157G>C

Select item 14820816039.

rs1482081603 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:228098549 (GRCh38)
1:228286250 (GRCh37)
Canonical SPDI:: NC_000001.11:228098548:G:A
Gene:: ARF1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.228098549G>A, NC_000001.10:g.228286250G>A, NM_001658.4:c.*536G>A, NM_001658.3:c.*536G>A, NM_001024228.2:c.*536G>A, NM_001024228.1:c.*536G>A, NM_001024226.2:c.*536G>A, NM_001024226.1:c.*536G>A, NM_001024227.1:c.*536G>A

Select item 148032258710.

rs1480322587 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:228098585 (GRCh38)
1:228286286 (GRCh37)
Canonical SPDI:: NC_000001.11:228098584:A:G
Gene:: ARF1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.228098585A>G, NC_000001.10:g.228286286A>G, NM_001658.4:c.*572A>G, NM_001658.3:c.*572A>G, NM_001024228.2:c.*572A>G, NM_001024228.1:c.*572A>G, NM_001024226.2:c.*572A>G, NM_001024226.1:c.*572A>G, NM_001024227.1:c.*572A>G

Select item 148007107411.

rs1480071074 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:228097904 (GRCh38)
1:228285605 (GRCh37)
Canonical SPDI:: NC_000001.11:228097903:A:G
Gene:: ARF1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.228097904A>G, NC_000001.10:g.228285605A>G, NG_082363.1:g.769A>G, NM_001658.4:c.437A>G, NM_001658.3:c.437A>G, NM_001024228.2:c.437A>G, NM_001024228.1:c.437A>G, NM_001024226.2:c.437A>G, NM_001024226.1:c.437A>G, NM_001024227.1:c.437A>G, NP_001649.1:p.His146Arg, NP_001019399.1:p.His146Arg, NP_001019397.1:p.His146Arg, NP_001019398.1:p.His146Arg

Select item 147993190012.

rs1479931900 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 1:228083373 (GRCh38)
1:228271074 (GRCh37)
Canonical SPDI:: NC_000001.11:228083372:C:A,NC_000001.11:228083372:C:G,NC_000001.11:228083372:C:T
Gene:: ARF1 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
G=0.000071/1 (TOMMO)
HGVS:: NC_000001.11:g.228083373C>A, NC_000001.11:g.228083373C>G, NC_000001.11:g.228083373C>T, NC_000001.10:g.228271074C>A, NC_000001.10:g.228271074C>G, NC_000001.10:g.228271074C>T, NM_001024227.1:c.-39C>A, NM_001024227.1:c.-39C>G, NM_001024227.1:c.-39C>T

Select item 147842376313.

rs1478423763 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 1:228098759 (GRCh38)
1:228286461 (GRCh37)
Canonical SPDI:: NC_000001.11:228098759:CCCC:CCCCC
Gene:: ARF1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: CCCCC=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.228098763dup, NC_000001.10:g.228286464dup, NM_001658.4:c.*750dup, NM_001658.3:c.*750dup, NM_001024228.2:c.*750dup, NM_001024228.1:c.*750dup, NM_001024226.2:c.*750dup, NM_001024226.1:c.*750dup, NM_001024227.1:c.*750dup

Select item 147804723014.

rs1478047230 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,T [Show Flanks]
Chromosome:: 1:228098187 (GRCh38)
1:228285888 (GRCh37)
Canonical SPDI:: NC_000001.11:228098186:A:C,NC_000001.11:228098186:A:T
Gene:: ARF1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.228098187A>C, NC_000001.11:g.228098187A>T, NC_000001.10:g.228285888A>C, NC_000001.10:g.228285888A>T, NG_082363.1:g.1052A>C, NG_082363.1:g.1052A>T, NM_001658.4:c.*174A>C, NM_001658.4:c.*174A>T, NM_001658.3:c.*174A>C, NM_001658.3:c.*174A>T, NM_001024228.2:c.*174A>C, NM_001024228.2:c.*174A>T, NM_001024228.1:c.*174A>C, NM_001024228.1:c.*174A>T, NM_001024226.2:c.*174A>C, NM_001024226.2:c.*174A>T, NM_001024226.1:c.*174A>C, NM_001024226.1:c.*174A>T, NM_001024227.1:c.*174A>C, NM_001024227.1:c.*174A>T

Select item 147636799815.

rs1476367998 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 1:228097416 (GRCh38)
1:228285117 (GRCh37)
Canonical SPDI:: NC_000001.11:228097415:C:A,NC_000001.11:228097415:C:T
Gene:: ARF1 (Varview), MIR3620 (Varview)
Functional Consequence:: downstream_transcript_variant,missense_variant,synonymous_variant,500B_downstream_variant,coding_sequence_variant
Validated:: by frequency,by cluster
MAF:: A=0./0 (Korea1K)
T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.228097416C>A, NC_000001.11:g.228097416C>T, NC_000001.10:g.228285117C>A, NC_000001.10:g.228285117C>T, NG_082363.1:g.281C>A, NG_082363.1:g.281C>T, NM_001658.4:c.223C>A, NM_001658.4:c.223C>T, NM_001658.3:c.223C>A, NM_001658.3:c.223C>T, NM_001024228.2:c.223C>A, NM_001024228.2:c.223C>T, NM_001024228.1:c.223C>A, NM_001024228.1:c.223C>T, NM_001024226.2:c.223C>A, NM_001024226.2:c.223C>T, NM_001024226.1:c.223C>A, NM_001024226.1:c.223C>T, NM_001024227.1:c.223C>A, NM_001024227.1:c.223C>T, NP_001649.1:p.Arg75Trp, NP_001019399.1:p.Arg75Trp, NP_001019397.1:p.Arg75Trp, NP_001019398.1:p.Arg75Trp

Select item 147349299716.

rs1473492997 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:228083242 (GRCh38)
1:228270943 (GRCh37)
Canonical SPDI:: NC_000001.11:228083241:C:T
Gene:: ARF1 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.228083242C>T, NC_000001.10:g.228270943C>T, NM_001024228.2:c.-148C>T, NM_001024228.1:c.-148C>T, NM_001024227.1:c.-170C>T

Select item 147256692817.

rs1472566928 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:228098920 (GRCh38)
1:228286621 (GRCh37)
Canonical SPDI:: NC_000001.11:228098919:C:T
Gene:: ARF1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.228098920C>T, NC_000001.10:g.228286621C>T, NM_001658.4:c.*907C>T, NM_001658.3:c.*907C>T, NM_001024228.2:c.*907C>T, NM_001024228.1:c.*907C>T, NM_001024226.2:c.*907C>T, NM_001024226.1:c.*907C>T, NM_001024227.1:c.*907C>T

Select item 147171535518.

rs1471715355 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:228097992 (GRCh38)
1:228285693 (GRCh37)
Canonical SPDI:: NC_000001.11:228097991:T:C
Gene:: ARF1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.228097992T>C, NC_000001.10:g.228285693T>C, NG_082363.1:g.857T>C, NM_001658.4:c.525T>C, NM_001658.3:c.525T>C, NM_001024228.2:c.525T>C, NM_001024228.1:c.525T>C, NM_001024226.2:c.525T>C, NM_001024226.1:c.525T>C, NM_001024227.1:c.525T>C

Select item 146888035119.

rs1468880351 [Homo sapiens]

Variant type:: DELINS
Alleles:: GACA>- [Show Flanks]
Chromosome:: 1:228098828 (GRCh38)
1:228286529 (GRCh37)
Canonical SPDI:: NC_000001.11:228098825:CAGACA:CA
Gene:: ARF1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: CA=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.228098828_228098831del, NC_000001.10:g.228286529_228286532del, NM_001658.4:c.*815_*818del, NM_001658.3:c.*815_*818del, NM_001024228.2:c.*815_*818del, NM_001024228.1:c.*815_*818del, NM_001024226.2:c.*815_*818del, NM_001024226.1:c.*815_*818del, NM_001024227.1:c.*815_*818del

Select item 146823865520.

rs1468238655 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:228083303 (GRCh38)
1:228271004 (GRCh37)
Canonical SPDI:: NC_000001.11:228083302:A:G
Gene:: ARF1 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.228083303A>G, NC_000001.10:g.228271004A>G, NM_001024228.2:c.-87A>G, NM_001024228.1:c.-87A>G, NM_001024227.1:c.-109A>G

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