SNP Links for Nucleotide (Select 77993287) - SNP

Links from Nucleotide

Items: 1 to 20 of 25

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Select item 14667975821.

rs1466797582 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:119787456 (GRCh38)
X:118921419 (GRCh37)
Canonical SPDI:: NC_000023.11:119787455:A:G
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency
MAF:: G=0.000006/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.119787456A>G, NC_000023.10:g.118921419A>G, NG_016250.2:g.9188T>C, NR_002584.1:n.29T>C

Select item 14389626022.

rs1438962602 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:119787409 (GRCh38)
X:118921372 (GRCh37)
Canonical SPDI:: NC_000023.11:119787408:A:G
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: G=0.000006/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.119787409A>G, NC_000023.10:g.118921372A>G, NG_016250.2:g.9235T>C, NR_002584.1:n.76T>C

Select item 14126633263.

rs1412663326 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:119787467 (GRCh38)
X:118921430 (GRCh37)
Canonical SPDI:: NC_000023.11:119787466:G:A
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.119787467G>A, NC_000023.10:g.118921430G>A, NG_016250.2:g.9177C>T, NR_002584.1:n.18C>T

Select item 14086909924.

rs1408690992 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:119787390 (GRCh38)
X:118921353 (GRCh37)
Canonical SPDI:: NC_000023.11:119787389:A:G
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.119787390A>G, NC_000023.10:g.118921353A>G, NG_016250.2:g.9254T>C, NR_002584.1:n.95T>C

Select item 13956261645.

rs1395626164 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:119787399 (GRCh38)
X:118921362 (GRCh37)
Canonical SPDI:: NC_000023.11:119787398:A:G
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: G=0.000006/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.119787399A>G, NC_000023.10:g.118921362A>G, NG_016250.2:g.9245T>C, NR_002584.1:n.86T>C

Select item 13954442786.

rs1395444278 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: X:119787366 (GRCh38)
X:118921329 (GRCh37)
Canonical SPDI:: NC_000023.11:119787365:A:C
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: C=0.000006/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.119787366A>C, NC_000023.10:g.118921329A>C, NG_016250.2:g.9278T>G, NR_002584.1:n.119T>G

Select item 13534961347.

rs1353496134 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:119787458 (GRCh38)
X:118921421 (GRCh37)
Canonical SPDI:: NC_000023.11:119787457:T:C
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000023/6 (TOPMED)
C=0.000029/3 (GnomAD)
HGVS:: NC_000023.11:g.119787458T>C, NC_000023.10:g.118921421T>C, NG_016250.2:g.9186A>G, NR_002584.1:n.27A>G

Select item 13528876278.

rs1352887627 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:119787365 (GRCh38)
X:118921328 (GRCh37)
Canonical SPDI:: NC_000023.11:119787364:C:T
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000008/2 (TOPMED)
T=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.119787365C>T, NC_000023.10:g.118921328C>T, NG_016250.2:g.9279G>A, NR_002584.1:n.120G>A

Select item 13490117319.

rs1349011731 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:119787416 (GRCh38)
X:118921379 (GRCh37)
Canonical SPDI:: NC_000023.11:119787415:C:T
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00001/1 (GnomAD)
T=0.000012/2 (GnomAD_exomes)
T=0.001027/3 (KOREAN)
HGVS:: NC_000023.11:g.119787416C>T, NC_000023.10:g.118921379C>T, NG_016250.2:g.9228G>A, NR_002584.1:n.69G>A

Select item 130806916210.

rs1308069162 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: X:119787383 (GRCh38)
X:118921346 (GRCh37)
Canonical SPDI:: NC_000023.11:119787382:C:A
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.119787383C>A, NC_000023.10:g.118921346C>A, NG_016250.2:g.9261G>T, NR_002584.1:n.102G>T

Select item 130301689411.

rs1303016894 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:119787410 (GRCh38)
X:118921373 (GRCh37)
Canonical SPDI:: NC_000023.11:119787409:T:C
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000006/1 (GnomAD_exomes)
C=0.000023/6 (TOPMED)
HGVS:: NC_000023.11:g.119787410T>C, NC_000023.10:g.118921373T>C, NG_016250.2:g.9234A>G, NR_002584.1:n.75A>G

Select item 125204777712.

rs1252047777 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:119787445 (GRCh38)
X:118921408 (GRCh37)
Canonical SPDI:: NC_000023.11:119787444:T:C
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency
MAF:: C=0.000006/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.119787445T>C, NC_000023.10:g.118921408T>C, NG_016250.2:g.9199A>G, NR_002584.1:n.40A>G

Select item 123690607913.

rs1236906079 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:119787417 (GRCh38)
X:118921380 (GRCh37)
Canonical SPDI:: NC_000023.11:119787416:G:A
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: A=0.000012/2 (GnomAD_exomes)
HGVS:: NC_000023.11:g.119787417G>A, NC_000023.10:g.118921380G>A, NG_016250.2:g.9227C>T, NR_002584.1:n.68C>T

Select item 101763063114.

rs1017630631 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:119787402 (GRCh38)
X:118921365 (GRCh37)
Canonical SPDI:: NC_000023.11:119787401:A:G
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.119787402A>G, NC_000023.10:g.118921365A>G, NG_016250.2:g.9242T>C, NR_002584.1:n.83T>C

Select item 77901249615.

rs779012496 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: X:119787443 (GRCh38)
X:118921406 (GRCh37)
Canonical SPDI:: NC_000023.11:119787442:A:C
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.00001/1 (GnomAD)
C=0.000018/3 (GnomAD_exomes)
C=0.000025/2 (ExAC)
HGVS:: NC_000023.11:g.119787443A>C, NC_000023.10:g.118921406A>C, NG_016250.2:g.9201T>G, NR_002584.1:n.42T>G

Select item 77606908616.

rs776069086 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:119787372 (GRCh38)
X:118921335 (GRCh37)
Canonical SPDI:: NC_000023.11:119787371:T:C
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: C=0./0 (ALSPAC)
C=0.0003/1 (TWINSUK)
HGVS:: NC_000023.11:g.119787372T>C, NC_000023.10:g.118921335T>C, NG_016250.2:g.9272A>G, NR_002584.1:n.113A>G

Select item 77285076517.

rs772850765 [Homo sapiens]

Variant type:: DELINS
Alleles:: GAT>- [Show Flanks]
Chromosome:: X:119787376 (GRCh38)
X:118921339 (GRCh37)
Canonical SPDI:: NC_000023.11:119787373:ATGAT:AT
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: -=0.000012/2 (GnomAD_exomes)
-=0.000013/1 (ExAC)
HGVS:: NC_000023.11:g.119787376_119787378del, NC_000023.10:g.118921339_118921341del, NG_016250.2:g.9268_9270del, NR_002584.1:n.109_111del

Select item 76659984718.

rs766599847 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: X:119787401 (GRCh38)
X:118921364 (GRCh37)
Canonical SPDI:: NC_000023.11:119787400:C:A
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000144/3 (ALFA)
A=0.000019/2 (GnomAD)
A=0.000019/5 (TOPMED)
A=0.00003/5 (GnomAD_exomes)
A=0.000037/3 (ExAC)
HGVS:: NC_000023.11:g.119787401C>A, NC_000023.10:g.118921364C>A, NG_016250.2:g.9243G>T, NR_002584.1:n.84G>T

Select item 76056618619.

rs760566186 [Homo sapiens]

Variant type:: DELINS
Alleles:: CAG>- [Show Flanks]
Chromosome:: X:119787431 (GRCh38)
X:118921394 (GRCh37)
Canonical SPDI:: NC_000023.11:119787427:CAGCAG:CAG
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: -=0.000006/1 (GnomAD_exomes)
-=0.000012/1 (ExAC)
HGVS:: NC_000023.11:g.119787428CAG[1], NC_000023.10:g.118921391CAG[1], NG_016250.2:g.9211CTG[1], NR_002584.1:n.52CTG[1]

Select item 75651238920.

rs756512389 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:119787400 (GRCh38)
X:118921363 (GRCh37)
Canonical SPDI:: NC_000023.11:119787399:T:C
Gene:: RPL39 (Varview), SNORA69 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000006/1 (GnomAD_exomes)
C=0.00001/1 (GnomAD)
C=0.000012/1 (ExAC)
HGVS:: NC_000023.11:g.119787400T>C, NC_000023.10:g.118921363T>C, NG_016250.2:g.9244A>G, NR_002584.1:n.85A>G

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