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Links from Nucleotide

Items: 1 to 20 of 808

2.

rs1489736928 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    A>G [Show Flanks]
    Chromosome:
    1:244843640 (GRCh38)
    1:245006942 (GRCh37)
    Canonical SPDI:
    NC_000001.11:244843639:A:G
    Gene:
    COX20 (Varview)
    Functional Consequence:
    non_coding_transcript_variant,3_prime_UTR_variant
    Validated:
    by frequency,by alfa
    MAF:
    G=0./0 (ALFA)
    G=0.000007/1 (GnomAD)
    HGVS:
    3.

    rs1488568002 [Homo sapiens]
      Variant type:
      DELINS
      Alleles:
      ->G [Show Flanks]
      Chromosome:
      1:244842220 (GRCh38)
      1:245005523 (GRCh37)
      Canonical SPDI:
      NC_000001.11:244842220:GG:GGG
      Gene:
      COX20 (Varview)
      Functional Consequence:
      frameshift_variant,non_coding_transcript_variant,coding_sequence_variant
      Validated:
      by frequency,by alfa
      MAF:
      GGG=0./0 (ALFA)
      G=0.000004/1 (TOPMED)
      HGVS:
      4.

      rs1487743779 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        A>T [Show Flanks]
        Chromosome:
        1:244844223 (GRCh38)
        1:245007525 (GRCh37)
        Canonical SPDI:
        NC_000001.11:244844222:A:T
        Gene:
        COX20 (Varview)
        Functional Consequence:
        non_coding_transcript_variant,3_prime_UTR_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        T=0./0 (ALFA)
        T=0.000004/1 (TOPMED)
        T=0.000014/2 (GnomAD)
        HGVS:
        5.

        rs1486455834 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          A>T [Show Flanks]
          Chromosome:
          1:244844467 (GRCh38)
          1:245007769 (GRCh37)
          Canonical SPDI:
          NC_000001.11:244844466:A:T
          Gene:
          COX20 (Varview)
          Functional Consequence:
          non_coding_transcript_variant,3_prime_UTR_variant
          Validated:
          by frequency,by alfa,by cluster
          MAF:
          T=0./0 (ALFA)
          T=0.000004/1 (TOPMED)
          T=0.000014/2 (GnomAD)
          HGVS:
          6.

          rs1486182272 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            C>T [Show Flanks]
            Chromosome:
            1:244844812 (GRCh38)
            1:245008114 (GRCh37)
            Canonical SPDI:
            NC_000001.11:244844811:C:T
            Gene:
            COX20 (Varview)
            Functional Consequence:
            non_coding_transcript_variant,3_prime_UTR_variant
            Validated:
            by frequency,by alfa
            MAF:
            T=0./0 (ALFA)
            T=0.000008/2 (TOPMED)
            HGVS:
            7.

            rs1486128057 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              G>T [Show Flanks]
              Chromosome:
              1:244844065 (GRCh38)
              1:245007367 (GRCh37)
              Canonical SPDI:
              NC_000001.11:244844064:G:T
              Gene:
              COX20 (Varview)
              Functional Consequence:
              non_coding_transcript_variant,3_prime_UTR_variant
              Validated:
              by frequency,by alfa
              MAF:
              T=0./0 (ALFA)
              T=0.000004/1 (TOPMED)
              HGVS:
              8.

              rs1485994608 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                T>C [Show Flanks]
                Chromosome:
                1:244845047 (GRCh38)
                1:245008349 (GRCh37)
                Canonical SPDI:
                NC_000001.11:244845046:T:C
                Gene:
                COX20 (Varview)
                Functional Consequence:
                non_coding_transcript_variant,3_prime_UTR_variant
                Validated:
                by frequency,by alfa,by cluster
                MAF:
                C=0./0 (ALFA)
                C=0.000015/4 (TOPMED)
                C=0.000036/5 (GnomAD)
                HGVS:
                9.

                rs1485472107 [Homo sapiens]
                  Variant type:
                  DELINS
                  Alleles:
                  TGAG>- [Show Flanks]
                  Chromosome:
                  1:244844751 (GRCh38)
                  1:245008053 (GRCh37)
                  Canonical SPDI:
                  NC_000001.11:244844747:GAGTGAG:GAG
                  Gene:
                  COX20 (Varview)
                  Functional Consequence:
                  non_coding_transcript_variant,3_prime_UTR_variant
                  Validated:
                  by frequency,by alfa
                  MAF:
                  GAG=0.000071/1 (ALFA)
                  -=0.000004/1 (TOPMED)
                  HGVS:
                  10.

                  rs1485285309 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    T>C [Show Flanks]
                    Chromosome:
                    1:244844980 (GRCh38)
                    1:245008282 (GRCh37)
                    Canonical SPDI:
                    NC_000001.11:244844979:T:C
                    Gene:
                    COX20 (Varview)
                    Functional Consequence:
                    non_coding_transcript_variant,3_prime_UTR_variant
                    Validated:
                    by frequency,by alfa
                    MAF:
                    C=0./0 (ALFA)
                    C=0.000004/1 (TOPMED)
                    HGVS:
                    11.

                    rs1483604041 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      T>C [Show Flanks]
                      Chromosome:
                      1:244843338 (GRCh38)
                      1:245006640 (GRCh37)
                      Canonical SPDI:
                      NC_000001.11:244843337:T:C
                      Gene:
                      COX20 (Varview)
                      Functional Consequence:
                      non_coding_transcript_variant,3_prime_UTR_variant
                      Validated:
                      by frequency,by alfa
                      MAF:
                      C=0./0 (ALFA)
                      C=0.000011/3 (TOPMED)
                      HGVS:
                      12.

                      rs1483601865 [Homo sapiens]
                        Variant type:
                        DELINS
                        Alleles:
                        CTATTA>- [Show Flanks]
                        Chromosome:
                        1:244843838 (GRCh38)
                        1:245007140 (GRCh37)
                        Canonical SPDI:
                        NC_000001.11:244843833:ATTACTATTA:ATTA
                        Gene:
                        COX20 (Varview)
                        Functional Consequence:
                        non_coding_transcript_variant,3_prime_UTR_variant
                        Validated:
                        by frequency,by alfa,by cluster
                        MAF:
                        ATTA=0./0 (ALFA)
                        -=0.000014/2 (GnomAD)
                        -=0.000015/4 (TOPMED)
                        HGVS:
                        14.

                        rs1482951895 [Homo sapiens]
                          Variant type:
                          SNV
                          Alleles:
                          A>T [Show Flanks]
                          Chromosome:
                          1:244844045 (GRCh38)
                          1:245007347 (GRCh37)
                          Canonical SPDI:
                          NC_000001.11:244844044:A:T
                          Gene:
                          COX20 (Varview)
                          Functional Consequence:
                          non_coding_transcript_variant,3_prime_UTR_variant
                          Validated:
                          by frequency,by alfa,by cluster
                          MAF:
                          T=0./0 (ALFA)
                          T=0.000004/1 (TOPMED)
                          T=0.000007/1 (GnomAD)
                          HGVS:
                          15.

                          rs1482249845 [Homo sapiens]
                            Variant type:
                            SNV
                            Alleles:
                            C>T [Show Flanks]
                            Chromosome:
                            1:244843231 (GRCh38)
                            1:245006533 (GRCh37)
                            Canonical SPDI:
                            NC_000001.11:244843230:C:T
                            Gene:
                            COX20 (Varview)
                            Functional Consequence:
                            non_coding_transcript_variant,3_prime_UTR_variant
                            Validated:
                            by frequency,by alfa
                            MAF:
                            T=0./0 (ALFA)
                            T=0.000004/1 (TOPMED)
                            HGVS:
                            17.

                            rs1479717146 [Homo sapiens]
                              Variant type:
                              SNV
                              Alleles:
                              T>G [Show Flanks]
                              Chromosome:
                              1:244835554 (GRCh38)
                              1:244998856 (GRCh37)
                              Canonical SPDI:
                              NC_000001.11:244835553:T:G
                              Gene:
                              COX20 (Varview)
                              Functional Consequence:
                              genic_upstream_transcript_variant,non_coding_transcript_variant,upstream_transcript_variant,5_prime_UTR_variant
                              Validated:
                              by frequency,by alfa,by cluster
                              MAF:
                              G=0./0 (ALFA)
                              G=0.000014/2 (GnomAD)
                              G=0.000019/5 (TOPMED)
                              HGVS:
                              18.

                              rs1479504712 [Homo sapiens]
                                Variant type:
                                DELINS
                                Alleles:
                                ->A [Show Flanks]
                                Chromosome:
                                1:244844934 (GRCh38)
                                1:245008237 (GRCh37)
                                Canonical SPDI:
                                NC_000001.11:244844934:AA:AAA
                                Gene:
                                COX20 (Varview)
                                Functional Consequence:
                                non_coding_transcript_variant,3_prime_UTR_variant
                                Validated:
                                by frequency,by alfa,by cluster
                                MAF:
                                AAA=0.000084/1 (ALFA)
                                A=0.000004/1 (TOPMED)
                                A=0.000007/1 (GnomAD)
                                HGVS:
                                19.

                                rs1479020995 [Homo sapiens]
                                  Variant type:
                                  SNV
                                  Alleles:
                                  G>A,T [Show Flanks]
                                  Chromosome:
                                  1:244835644 (GRCh38)
                                  1:244998946 (GRCh37)
                                  Canonical SPDI:
                                  NC_000001.11:244835643:G:A,NC_000001.11:244835643:G:T
                                  Gene:
                                  COX20 (Varview)
                                  Functional Consequence:
                                  genic_upstream_transcript_variant,non_coding_transcript_variant,upstream_transcript_variant,5_prime_UTR_variant
                                  Validated:
                                  by frequency,by alfa,by cluster
                                  MAF:
                                  T=0.000123/2 (ALFA)
                                  A=0.000004/1 (TOPMED)
                                  T=0.000223/1 (Estonian)
                                  T=0.000685/96 (GnomAD)
                                  T=0.000937/6 (1000Genomes)
                                  HGVS:

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