SNP Links for Nucleotide (Select 919931703) - SNP

Links from Nucleotide

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Select item 14879025821.

rs1487902582 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 5:7302141 (GRCh38)
5:7302254 (GRCh37)
Canonical SPDI:: NC_000005.10:7302140:T:C
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000005.10:g.7302141T>C, NC_000005.9:g.7302254T>C, NR_033906.2:n.760A>G, NR_033906.1:n.760A>G, NM_001034846.1:c.-416A>G

Select item 14840887152.

rs1484088715 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,G [Show Flanks]
Chromosome:: 5:7301799 (GRCh38)
5:7301912 (GRCh37)
Canonical SPDI:: NC_000005.10:7301798:T:A,NC_000005.10:7301798:T:G
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000005.10:g.7301799T>A, NC_000005.10:g.7301799T>G, NC_000005.9:g.7301912T>A, NC_000005.9:g.7301912T>G, NR_033906.2:n.1102A>T, NR_033906.2:n.1102A>C, NR_033906.1:n.1102A>T, NR_033906.1:n.1102A>C, NM_001034846.1:c.-74A>T, NM_001034846.1:c.-74A>C

Select item 14840291363.

rs1484029136 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 5:7306615 (GRCh38)
5:7306728 (GRCh37)
Canonical SPDI:: NC_000005.10:7306614:G:A
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.7306615G>A, NC_000005.9:g.7306728G>A, NR_033906.2:n.100C>T, NR_033906.1:n.100C>T, NM_001034846.1:c.-1076C>T

Select item 14839436004.

rs1483943600 [Homo sapiens]

Variant type:: DELINS
Alleles:: CTC>- [Show Flanks]
Chromosome:: 5:7301379 (GRCh38)
5:7301492 (GRCh37)
Canonical SPDI:: NC_000005.10:7301375:CTCCTC:CTC
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CTCCTC=0.000253/3 (ALFA)
-=0.000064/9 (GnomAD)
-=0.000106/28 (TOPMED)
HGVS:: NC_000005.10:g.7301376CTC[1], NC_000005.9:g.7301489CTC[1], NR_033906.2:n.1227GAG[1], NR_033906.1:n.1227GAG[1], NM_001034846.1:c.52GAG[1]

Select item 14825121075.

rs1482512107 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 5:7301430 (GRCh38)
5:7301543 (GRCh37)
Canonical SPDI:: NC_000005.10:7301429:C:G
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.7301430C>G, NC_000005.9:g.7301543C>G, NR_033906.2:n.1178G>C, NR_033906.1:n.1178G>C, NM_001034846.1:c.3G>C

Select item 14824793436.

rs1482479343 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 5:7302256 (GRCh38)
5:7302369 (GRCh37)
Canonical SPDI:: NC_000005.10:7302255:C:T
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.7302256C>T, NC_000005.9:g.7302369C>T, NR_033906.2:n.645G>A, NR_033906.1:n.645G>A, NM_001034846.1:c.-531G>A

Select item 14807042177.

rs1480704217 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 5:7301357 (GRCh38)
5:7301471 (GRCh37)
Canonical SPDI:: NC_000005.10:7301357:C:CC
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: CC=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000005.10:g.7301358dup, NC_000005.9:g.7301471dup, NR_033906.2:n.1250dup, NR_033906.1:n.1250dup, NM_001034846.1:c.75dup

Select item 14804448668.

rs1480444866 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 5:7303959 (GRCh38)
5:7304072 (GRCh37)
Canonical SPDI:: NC_000005.10:7303958:T:C
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.7303959T>C, NC_000005.9:g.7304072T>C, NR_033906.2:n.370A>G, NR_033906.1:n.370A>G, NM_001034846.1:c.-806A>G

Select item 14780866949.

rs1478086694 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 5:7302219 (GRCh38)
5:7302332 (GRCh37)
Canonical SPDI:: NC_000005.10:7302218:C:T
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000114/16 (GnomAD)
HGVS:: NC_000005.10:g.7302219C>T, NC_000005.9:g.7302332C>T, NR_033906.2:n.682G>A, NR_033906.1:n.682G>A, NM_001034846.1:c.-494G>A

Select item 147664069310.

rs1476640693 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 5:7302122 (GRCh38)
5:7302235 (GRCh37)
Canonical SPDI:: NC_000005.10:7302121:C:A,NC_000005.10:7302121:C:T
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000005.10:g.7302122C>A, NC_000005.10:g.7302122C>T, NC_000005.9:g.7302235C>A, NC_000005.9:g.7302235C>T, NR_033906.2:n.779G>T, NR_033906.2:n.779G>A, NR_033906.1:n.779G>T, NR_033906.1:n.779G>A, NM_001034846.1:c.-397G>T, NM_001034846.1:c.-397G>A

Select item 147458063511.

rs1474580635 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 5:7306529 (GRCh38)
5:7306642 (GRCh37)
Canonical SPDI:: NC_000005.10:7306528:A:G,NC_000005.10:7306528:A:T
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.00202/24 (ALFA)
G=0.00004/1 (TOMMO)
HGVS:: NC_000005.10:g.7306529A>G, NC_000005.10:g.7306529A>T, NC_000005.9:g.7306642A>G, NC_000005.9:g.7306642A>T, NR_033906.2:n.186T>C, NR_033906.2:n.186T>A, NR_033906.1:n.186T>C, NR_033906.1:n.186T>A, NM_001034846.1:c.-990T>C, NM_001034846.1:c.-990T>A

Select item 147413238612.

rs1474132386 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 5:7303542 (GRCh38)
5:7303655 (GRCh37)
Canonical SPDI:: NC_000005.10:7303541:C:T
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000005.10:g.7303542C>T, NC_000005.9:g.7303655C>T, NR_033906.2:n.617G>A, NR_033906.1:n.617G>A, NM_001034846.1:c.-559G>A

Select item 147294194113.

rs1472941941 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 5:7306686 (GRCh38)
5:7306799 (GRCh37)
Canonical SPDI:: NC_000005.10:7306685:A:G
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000005.10:g.7306686A>G, NC_000005.9:g.7306799A>G, NR_033906.2:n.29T>C, NR_033906.1:n.29T>C, NM_001034846.1:c.-1147T>C

Select item 147054178114.

rs1470541781 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 5:7301807 (GRCh38)
5:7301920 (GRCh37)
Canonical SPDI:: NC_000005.10:7301806:G:T
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000005.10:g.7301807G>T, NC_000005.9:g.7301920G>T, NR_033906.2:n.1094C>A, NR_033906.1:n.1094C>A, NM_001034846.1:c.-82C>A

Select item 147005505415.

rs1470055054 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 5:7303754 (GRCh38)
5:7303867 (GRCh37)
Canonical SPDI:: NC_000005.10:7303753:G:A
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000021/3 (GnomAD)
A=0.000064/17 (TOPMED)
A=0.000342/1 (KOREAN)
A=0.00046/8 (TOMMO)
HGVS:: NC_000005.10:g.7303754G>A, NC_000005.9:g.7303867G>A, NR_033906.2:n.487C>T, NR_033906.1:n.487C>T, NM_001034846.1:c.-689C>T

Select item 146824671716.

rs1468246717 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 5:7301407 (GRCh38)
5:7301520 (GRCh37)
Canonical SPDI:: NC_000005.10:7301406:C:T
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000084/1 (ALFA)
T=0.000106/2 (TOMMO)
T=0.000257/36 (GnomAD)
HGVS:: NC_000005.10:g.7301407C>T, NC_000005.9:g.7301520C>T, NR_033906.2:n.1201G>A, NR_033906.1:n.1201G>A, NM_001034846.1:c.26G>A

Select item 146633952017.

rs1466339520 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 5:7306668 (GRCh38)
5:7306781 (GRCh37)
Canonical SPDI:: NC_000005.10:7306667:C:A,NC_000005.10:7306667:C:T
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000005.10:g.7306668C>A, NC_000005.10:g.7306668C>T, NC_000005.9:g.7306781C>A, NC_000005.9:g.7306781C>T, NR_033906.2:n.47G>T, NR_033906.2:n.47G>A, NR_033906.1:n.47G>T, NR_033906.1:n.47G>A, NM_001034846.1:c.-1129G>T, NM_001034846.1:c.-1129G>A

Select item 146524233718.

rs1465242337 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 5:7302227 (GRCh38)
5:7302340 (GRCh37)
Canonical SPDI:: NC_000005.10:7302226:T:C
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000005.10:g.7302227T>C, NC_000005.9:g.7302340T>C, NR_033906.2:n.674A>G, NR_033906.1:n.674A>G, NM_001034846.1:c.-502A>G

Select item 146262453719.

rs1462624537 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 5:7301334 (GRCh38)
5:7301447 (GRCh37)
Canonical SPDI:: NC_000005.10:7301333:C:A
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000005.10:g.7301334C>A, NC_000005.9:g.7301447C>A, NR_033906.2:n.1274G>T, NR_033906.1:n.1274G>T, NM_001034846.1:c.99G>T

Select item 146198165820.

rs1461981658 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 5:7303624 (GRCh38)
5:7303737 (GRCh37)
Canonical SPDI:: NC_000005.10:7303623:G:A
Gene:: LOC442132 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000005.10:g.7303624G>A, NC_000005.9:g.7303737G>A, NR_033906.2:n.535C>T, NR_033906.1:n.535C>T, NM_001034846.1:c.-641C>T

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