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Links from Nucleotide

Items: 1 to 20 of 26

1.

rs1458452193 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    G>A [Show Flanks]
    Chromosome:
    6:31541118 (GRCh38)
    6:31508895 (GRCh37)
    Canonical SPDI:
    NC_000006.12:31541117:G:A
    Gene:
    DDX39B (Varview), SNORD84 (Varview), ATP6V1G2-DDX39B (Varview), DDX39B-AS1 (Varview)
    Functional Consequence:
    non_coding_transcript_variant,2KB_upstream_variant,intron_variant,upstream_transcript_variant
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    A=0./0 (ALFA)
    A=0.000004/1 (GnomAD_exomes)
    A=0.000004/1 (TOPMED)
    A=0.000007/1 (GnomAD)
    HGVS:
    2.

    rs1453877566 [Homo sapiens]
      Variant type:
      DELINS
      Alleles:
      ->T [Show Flanks]
      Chromosome:
      6:31541116 (GRCh38)
      6:31508894 (GRCh37)
      Canonical SPDI:
      NC_000006.12:31541116:T:TT
      Gene:
      DDX39B (Varview), SNORD84 (Varview), ATP6V1G2-DDX39B (Varview), DDX39B-AS1 (Varview)
      Functional Consequence:
      upstream_transcript_variant,intron_variant,non_coding_transcript_variant,2KB_upstream_variant
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      TT=0./0 (ALFA)
      T=0.000045/12 (TOPMED)
      T=0.00005/7 (GnomAD)
      HGVS:
      3.

      rs1332139866 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        C>T [Show Flanks]
        Chromosome:
        6:31541139 (GRCh38)
        6:31508916 (GRCh37)
        Canonical SPDI:
        NC_000006.12:31541138:C:T
        Gene:
        DDX39B (Varview), SNORD84 (Varview), ATP6V1G2-DDX39B (Varview), DDX39B-AS1 (Varview)
        Functional Consequence:
        intron_variant,2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        T=0./0 (ALFA)
        T=0.000004/1 (TOPMED)
        T=0.000007/1 (GnomAD)
        HGVS:
        4.

        rs1321859161 [Homo sapiens]
          Variant type:
          DELINS
          Alleles:
          ACA>- [Show Flanks]
          Chromosome:
          6:31541167 (GRCh38)
          6:31508944 (GRCh37)
          Canonical SPDI:
          NC_000006.12:31541165:AACA:A
          Gene:
          DDX39B (Varview), SNORD84 (Varview), ATP6V1G2-DDX39B (Varview), DDX39B-AS1 (Varview)
          Functional Consequence:
          2KB_upstream_variant,non_coding_transcript_variant,intron_variant,upstream_transcript_variant
          Validated:
          by frequency
          MAF:
          -=0.000004/1 (GnomAD_exomes)
          HGVS:
          5.

          rs1307734467 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            A>G [Show Flanks]
            Chromosome:
            6:31541123 (GRCh38)
            6:31508900 (GRCh37)
            Canonical SPDI:
            NC_000006.12:31541122:A:G
            Gene:
            DDX39B (Varview), SNORD84 (Varview), ATP6V1G2-DDX39B (Varview), DDX39B-AS1 (Varview)
            Functional Consequence:
            2KB_upstream_variant,intron_variant,upstream_transcript_variant,non_coding_transcript_variant
            Validated:
            by frequency
            MAF:
            G=0.000004/1 (GnomAD_exomes)
            HGVS:
            6.

            rs1232772517 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              G>A [Show Flanks]
              Chromosome:
              6:31541122 (GRCh38)
              6:31508899 (GRCh37)
              Canonical SPDI:
              NC_000006.12:31541121:G:A
              Gene:
              DDX39B (Varview), SNORD84 (Varview), ATP6V1G2-DDX39B (Varview), DDX39B-AS1 (Varview)
              Functional Consequence:
              2KB_upstream_variant,non_coding_transcript_variant,intron_variant,upstream_transcript_variant
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              A=0./0 (ALFA)
              A=0.000007/1 (GnomAD)
              HGVS:
              8.

              rs1180313740 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                G>A [Show Flanks]
                Chromosome:
                6:31541109 (GRCh38)
                6:31508886 (GRCh37)
                Canonical SPDI:
                NC_000006.12:31541108:G:A
                Gene:
                DDX39B (Varview), SNORD84 (Varview), ATP6V1G2-DDX39B (Varview), DDX39B-AS1 (Varview)
                Functional Consequence:
                upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant,intron_variant
                Validated:
                by frequency,by alfa
                MAF:
                A=0.000071/1 (ALFA)
                A=0.000004/1 (TOPMED)
                HGVS:
                9.

                rs1050072244 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  T>C [Show Flanks]
                  Chromosome:
                  6:31541120 (GRCh38)
                  6:31508897 (GRCh37)
                  Canonical SPDI:
                  NC_000006.12:31541119:T:C
                  Gene:
                  DDX39B (Varview), SNORD84 (Varview), ATP6V1G2-DDX39B (Varview), DDX39B-AS1 (Varview)
                  Functional Consequence:
                  2KB_upstream_variant,upstream_transcript_variant,intron_variant,non_coding_transcript_variant
                  Validated:
                  by frequency,by alfa
                  MAF:
                  C=0./0 (ALFA)
                  C=0.000007/1 (GnomAD)
                  HGVS:
                  10.

                  rs947284213 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    C>T [Show Flanks]
                    Chromosome:
                    6:31541152 (GRCh38)
                    6:31508929 (GRCh37)
                    Canonical SPDI:
                    NC_000006.12:31541151:C:T
                    Gene:
                    DDX39B (Varview), SNORD84 (Varview), ATP6V1G2-DDX39B (Varview), DDX39B-AS1 (Varview)
                    Functional Consequence:
                    2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant,intron_variant
                    HGVS:
                    11.

                    rs889710473 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      G>A [Show Flanks]
                      Chromosome:
                      6:31541138 (GRCh38)
                      6:31508915 (GRCh37)
                      Canonical SPDI:
                      NC_000006.12:31541137:G:A
                      Gene:
                      DDX39B (Varview), SNORD84 (Varview), ATP6V1G2-DDX39B (Varview), DDX39B-AS1 (Varview)
                      Functional Consequence:
                      upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant,intron_variant
                      Validated:
                      by frequency,by alfa,by cluster
                      MAF:
                      A=0./0 (ALFA)
                      A=0.000004/1 (GnomAD_exomes)
                      A=0.000014/2 (GnomAD)
                      A=0.000023/6 (TOPMED)
                      HGVS:
                      12.

                      rs774924201 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        C>T [Show Flanks]
                        Chromosome:
                        6:31541104 (GRCh38)
                        6:31508881 (GRCh37)
                        Canonical SPDI:
                        NC_000006.12:31541103:C:T
                        Gene:
                        DDX39B (Varview), SNORD84 (Varview), ATP6V1G2-DDX39B (Varview), DDX39B-AS1 (Varview)
                        Functional Consequence:
                        upstream_transcript_variant,2KB_upstream_variant,intron_variant,non_coding_transcript_variant
                        Validated:
                        by frequency,by cluster
                        MAF:
                        T=0.000004/1 (GnomAD_exomes)
                        T=0.000009/1 (ExAC)
                        HGVS:
                        13.
                        14.

                        rs773391382 [Homo sapiens]
                          Variant type:
                          SNV
                          Alleles:
                          G>A [Show Flanks]
                          Chromosome:
                          6:31541127 (GRCh38)
                          6:31508904 (GRCh37)
                          Canonical SPDI:
                          NC_000006.12:31541126:G:A
                          Gene:
                          DDX39B (Varview), SNORD84 (Varview), ATP6V1G2-DDX39B (Varview), DDX39B-AS1 (Varview)
                          Functional Consequence:
                          upstream_transcript_variant,2KB_upstream_variant,intron_variant,non_coding_transcript_variant
                          Validated:
                          by frequency,by alfa,by cluster
                          MAF:
                          A=0.000094/1 (ALFA)
                          A=0.000004/1 (TOPMED)
                          A=0.000007/1 (GnomAD)
                          A=0.000008/2 (GnomAD_exomes)
                          A=0.000009/1 (ExAC)
                          HGVS:
                          15.

                          rs769049811 [Homo sapiens]
                            Variant type:
                            SNV
                            Alleles:
                            A>G [Show Flanks]
                            Chromosome:
                            6:31541108 (GRCh38)
                            6:31508885 (GRCh37)
                            Canonical SPDI:
                            NC_000006.12:31541107:A:G
                            Gene:
                            DDX39B (Varview), SNORD84 (Varview), ATP6V1G2-DDX39B (Varview), DDX39B-AS1 (Varview)
                            Functional Consequence:
                            upstream_transcript_variant,2KB_upstream_variant,intron_variant,non_coding_transcript_variant
                            Validated:
                            by frequency,by cluster
                            MAF:
                            G=0.000008/2 (GnomAD_exomes)
                            G=0.000009/1 (ExAC)
                            HGVS:
                            16.

                            rs767686583 [Homo sapiens]
                              Variant type:
                              SNV
                              Alleles:
                              G>A [Show Flanks]
                              Chromosome:
                              6:31541125 (GRCh38)
                              6:31508902 (GRCh37)
                              Canonical SPDI:
                              NC_000006.12:31541124:G:A
                              Gene:
                              DDX39B (Varview), SNORD84 (Varview), ATP6V1G2-DDX39B (Varview), DDX39B-AS1 (Varview)
                              Functional Consequence:
                              2KB_upstream_variant,intron_variant,upstream_transcript_variant,non_coding_transcript_variant
                              Validated:
                              by frequency,by cluster
                              MAF:
                              A=0.000008/2 (GnomAD_exomes)
                              A=0.000009/1 (ExAC)
                              HGVS:
                              17.

                              rs766454623 [Homo sapiens]
                                Variant type:
                                DELINS
                                Alleles:
                                CAT>- [Show Flanks]
                                Chromosome:
                                6:31541171 (GRCh38)
                                6:31508948 (GRCh37)
                                Canonical SPDI:
                                NC_000006.12:31541167:CATCAT:CAT
                                Gene:
                                DDX39B (Varview), SNORD84 (Varview), ATP6V1G2-DDX39B (Varview), DDX39B-AS1 (Varview)
                                Functional Consequence:
                                2KB_upstream_variant,intron_variant,upstream_transcript_variant,non_coding_transcript_variant
                                Validated:
                                by frequency,by alfa,by cluster
                                MAF:
                                CATCAT=0./0 (ALFA)
                                -=0.000008/2 (GnomAD_exomes)
                                -=0.000009/1 (ExAC)
                                -=0.000093/13 (GnomAD)
                                -=0.000128/34 (TOPMED)
                                HGVS:
                                18.

                                rs763948085 [Homo sapiens]
                                  Variant type:
                                  SNV
                                  Alleles:
                                  C>G [Show Flanks]
                                  Chromosome:
                                  6:31541171 (GRCh38)
                                  6:31508948 (GRCh37)
                                  Canonical SPDI:
                                  NC_000006.12:31541170:C:G
                                  Gene:
                                  DDX39B (Varview), SNORD84 (Varview), ATP6V1G2-DDX39B (Varview), DDX39B-AS1 (Varview)
                                  Functional Consequence:
                                  2KB_upstream_variant,intron_variant,upstream_transcript_variant,non_coding_transcript_variant
                                  Validated:
                                  by frequency,by cluster
                                  MAF:
                                  G=0.000008/2 (GnomAD_exomes)
                                  G=0.000009/1 (ExAC)
                                  HGVS:
                                  20.

                                  rs760644493 [Homo sapiens]
                                    Variant type:
                                    DELINS
                                    Alleles:
                                    ->G [Show Flanks]
                                    Chromosome:
                                    6:31541117 (GRCh38)
                                    6:31508895 (GRCh37)
                                    Canonical SPDI:
                                    NC_000006.12:31541117:G:GG
                                    Gene:
                                    DDX39B (Varview), SNORD84 (Varview), ATP6V1G2-DDX39B (Varview), DDX39B-AS1 (Varview)
                                    Functional Consequence:
                                    non_coding_transcript_variant,intron_variant,upstream_transcript_variant,2KB_upstream_variant
                                    Validated:
                                    by frequency,by cluster
                                    MAF:
                                    G=0.000004/1 (GnomAD_exomes)
                                    G=0.000009/1 (ExAC)
                                    HGVS:

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