SNP Links for Nucleotide (Select 974141211) - SNP

Links from Nucleotide

Items: 1 to 20 of 154

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Select item 14857938541.

rs1485793854 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:14343716 (GRCh38)
19:14454528 (GRCh37)
Canonical SPDI:: NC_000019.10:14343715:C:T
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00004/1 (TOMMO)
T=0.00055/1 (Korea1K)
HGVS:: NC_000019.10:g.14343716C>T, NC_000019.9:g.14454528C>T, NR_134916.1:n.568C>T

Select item 14782009412.

rs1478200941 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>- [Show Flanks]
Chromosome:: 19:14343798 (GRCh38)
19:14454610 (GRCh37)
Canonical SPDI:: NC_000019.10:14343797:AA:A
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AA=0./0 (ALFA)
-=0.000026/7 (TOPMED)
-=0.000029/4 (GnomAD)
HGVS:: NC_000019.10:g.14343799del, NC_000019.9:g.14454611del, NR_134916.1:n.651del

Select item 14761613433.

rs1476161343 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 19:14333962 (GRCh38)
19:14444774 (GRCh37)
Canonical SPDI:: NC_000019.10:14333961:A:T
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000015/2 (GnomAD)
HGVS:: NC_000019.10:g.14333962A>T, NC_000019.9:g.14444774A>T, NR_134916.1:n.220A>T

Select item 14717022364.

rs1471702236 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 19:14343438 (GRCh38)
19:14454250 (GRCh37)
Canonical SPDI:: NC_000019.10:14343437:C:A,NC_000019.10:14343437:C:G,NC_000019.10:14343437:C:T
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
T=0.000014/2 (GnomAD)
G=0.000071/1 (TOMMO)
HGVS:: NC_000019.10:g.14343438C>A, NC_000019.10:g.14343438C>G, NC_000019.10:g.14343438C>T, NC_000019.9:g.14454250C>A, NC_000019.9:g.14454250C>G, NC_000019.9:g.14454250C>T, NR_134916.1:n.290C>A, NR_134916.1:n.290C>G, NR_134916.1:n.290C>T

Select item 14691953595.

rs1469195359 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:14333822 (GRCh38)
19:14444634 (GRCh37)
Canonical SPDI:: NC_000019.10:14333821:G:A
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000019.10:g.14333822G>A, NC_000019.9:g.14444634G>A, NR_134916.1:n.80G>A

Select item 14661426506.

rs1466142650 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:14343545 (GRCh38)
19:14454357 (GRCh37)
Canonical SPDI:: NC_000019.10:14343544:T:C
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.14343545T>C, NC_000019.9:g.14454357T>C, NR_134916.1:n.397T>C

Select item 14612007227.

rs1461200722 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 19:14333985 (GRCh38)
19:14444797 (GRCh37)
Canonical SPDI:: NC_000019.10:14333984:G:C
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000031/4 (GnomAD)
HGVS:: NC_000019.10:g.14333985G>C, NC_000019.9:g.14444797G>C, NR_134916.1:n.243G>C

Select item 14538291888.

rs1453829188 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:14343839 (GRCh38)
19:14454651 (GRCh37)
Canonical SPDI:: NC_000019.10:14343838:C:T
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.14343839C>T, NC_000019.9:g.14454651C>T, NR_134916.1:n.691C>T

Select item 14530446179.

rs1453044617 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:14343656 (GRCh38)
19:14454468 (GRCh37)
Canonical SPDI:: NC_000019.10:14343655:A:G
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000029/4 (GnomAD)
G=0.000045/12 (TOPMED)
HGVS:: NC_000019.10:g.14343656A>G, NC_000019.9:g.14454468A>G, NR_134916.1:n.508A>G

Select item 144753853510.

rs1447538535 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 19:14343586 (GRCh38)
19:14454398 (GRCh37)
Canonical SPDI:: NC_000019.10:14343585:A:T
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000021/3 (GnomAD)
HGVS:: NC_000019.10:g.14343586A>T, NC_000019.9:g.14454398A>T, NR_134916.1:n.438A>T

Select item 144560341811.

rs1445603418 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:14333861 (GRCh38)
19:14444673 (GRCh37)
Canonical SPDI:: NC_000019.10:14333860:G:A
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.14333861G>A, NC_000019.9:g.14444673G>A, NR_134916.1:n.119G>A

Select item 144471792812.

rs1444717928 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 19:14343500 (GRCh38)
19:14454312 (GRCh37)
Canonical SPDI:: NC_000019.10:14343499:G:C
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.14343500G>C, NC_000019.9:g.14454312G>C, NR_134916.1:n.352G>C

Select item 143871763113.

rs1438717631 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:14333769 (GRCh38)
19:14444581 (GRCh37)
Canonical SPDI:: NC_000019.10:14333768:G:A
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.14333769G>A, NC_000019.9:g.14444581G>A, NR_134916.1:n.27G>A

Select item 143214686314.

rs1432146863 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 19:14333849 (GRCh38)
19:14444661 (GRCh37)
Canonical SPDI:: NC_000019.10:14333848:C:G,NC_000019.10:14333848:C:T
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
G=0.003858/109 (TOMMO)
HGVS:: NC_000019.10:g.14333849C>G, NC_000019.10:g.14333849C>T, NC_000019.9:g.14444661C>G, NC_000019.9:g.14444661C>T, NR_134916.1:n.107C>G, NR_134916.1:n.107C>T

Select item 142832211315.

rs1428322113 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:14343881 (GRCh38)
19:14454693 (GRCh37)
Canonical SPDI:: NC_000019.10:14343880:C:T
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.14343881C>T, NC_000019.9:g.14454693C>T, NR_134916.1:n.733C>T

Select item 141918629816.

rs1419186298 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:14343685 (GRCh38)
19:14454497 (GRCh37)
Canonical SPDI:: NC_000019.10:14343684:T:C
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.14343685T>C, NC_000019.9:g.14454497T>C, NR_134916.1:n.537T>C

Select item 141821335617.

rs1418213356 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:14333955 (GRCh38)
19:14444767 (GRCh37)
Canonical SPDI:: NC_000019.10:14333954:C:T
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.14333955C>T, NC_000019.9:g.14444767C>T, NR_134916.1:n.213C>T

Select item 141451783318.

rs1414517833 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 19:14333939 (GRCh38)
19:14444751 (GRCh37)
Canonical SPDI:: NC_000019.10:14333938:G:T
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.14333939G>T, NC_000019.9:g.14444751G>T, NR_134916.1:n.197G>T

Select item 140380819219.

rs1403808192 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 19:14333926 (GRCh38)
19:14444738 (GRCh37)
Canonical SPDI:: NC_000019.10:14333925:C:A
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000019.10:g.14333926C>A, NC_000019.9:g.14444738C>A, NR_134916.1:n.184C>A

Select item 140015635620.

rs1400156356 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 19:14343810 (GRCh38)
19:14454622 (GRCh37)
Canonical SPDI:: NC_000019.10:14343809:C:A,NC_000019.10:14343809:C:G
Gene:: LINC01842 (Varview), LINC01841 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000014/2 (GnomAD)
A=0.000312/2 (1000Genomes)
HGVS:: NC_000019.10:g.14343810C>A, NC_000019.10:g.14343810C>G, NC_000019.9:g.14454622C>A, NC_000019.9:g.14454622C>G, NR_134916.1:n.662C>A, NR_134916.1:n.662C>G

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