SNP Links for Nucleotide (Select 987996623) - SNP

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Links from Nucleotide

Items: 1 to 20 of 128

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Select item 14827828501.

rs1482782850 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 9:136648664 (GRCh38)
9:139543116 (GRCh37)
Canonical SPDI:: NC_000009.12:136648663:A:T
Gene:: HSPC324 (Varview), LOC102724193 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.000007/1 (GnomAD)
T=0.000227/1 (Estonian)
HGVS:: NC_000009.12:g.136648664A>T, NC_000009.11:g.139543116A>T, NR_135132.1:n.503T>A

Select item 14765284392.

rs1476528439 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:136648883 (GRCh38)
9:139543335 (GRCh37)
Canonical SPDI:: NC_000009.12:136648882:G:A
Gene:: HSPC324 (Varview), LOC102724193 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.136648883G>A, NC_000009.11:g.139543335G>A, XR_930443.3:n.1047G>A, XR_930443.2:n.609G>A, NR_135132.1:n.284C>T

Select item 14731064163.

rs1473106416 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:136648676 (GRCh38)
9:139543128 (GRCh37)
Canonical SPDI:: NC_000009.12:136648675:C:T
Gene:: HSPC324 (Varview), LOC102724193 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.136648676C>T, NC_000009.11:g.139543128C>T, NR_135132.1:n.491G>A

Select item 14727761984.

rs1472776198 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 9:136648781 (GRCh38)
9:139543233 (GRCh37)
Canonical SPDI:: NC_000009.12:136648780:G:A,NC_000009.12:136648780:G:C
Gene:: HSPC324 (Varview), LOC102724193 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000015/4 (TOPMED)
HGVS:: NC_000009.12:g.136648781G>A, NC_000009.12:g.136648781G>C, NC_000009.11:g.139543233G>A, NC_000009.11:g.139543233G>C, XR_930443.3:n.945G>A, XR_930443.3:n.945G>C, XR_930443.2:n.507G>A, XR_930443.2:n.507G>C, NR_135132.1:n.386C>T, NR_135132.1:n.386C>G

Select item 14704441205.

rs1470444120 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:136649035 (GRCh38)
9:139543487 (GRCh37)
Canonical SPDI:: NC_000009.12:136649034:A:G
Gene:: HSPC324 (Varview), LOC102724193 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.136649035A>G, NC_000009.11:g.139543487A>G, XR_930443.3:n.1199A>G, XR_930443.2:n.761A>G, XR_930443.1:n.35A>G, NR_135132.1:n.132T>C, XR_007061867.1:n.89A>G

Select item 14635728096.

rs1463572809 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:136648788 (GRCh38)
9:139543240 (GRCh37)
Canonical SPDI:: NC_000009.12:136648787:G:A
Gene:: HSPC324 (Varview), LOC102724193 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.136648788G>A, NC_000009.11:g.139543240G>A, XR_930443.3:n.952G>A, XR_930443.2:n.514G>A, NR_135132.1:n.379C>T

Select item 14488940067.

rs1448894006 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:136648814 (GRCh38)
9:139543266 (GRCh37)
Canonical SPDI:: NC_000009.12:136648813:C:T
Gene:: HSPC324 (Varview), LOC102724193 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.136648814C>T, NC_000009.11:g.139543266C>T, XR_930443.3:n.978C>T, XR_930443.2:n.540C>T, NR_135132.1:n.353G>A

Select item 14477929538.

rs1447792953 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:136648873 (GRCh38)
9:139543325 (GRCh37)
Canonical SPDI:: NC_000009.12:136648872:G:A
Gene:: HSPC324 (Varview), LOC102724193 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0./0 (GnomAD)
A=0.000008/2 (TOPMED)
A=0.000035/1 (TOMMO)
A=0.001092/2 (Korea1K)
HGVS:: NC_000009.12:g.136648873G>A, NC_000009.11:g.139543325G>A, XR_930443.3:n.1037G>A, XR_930443.2:n.599G>A, NR_135132.1:n.294C>T

Select item 14469425729.

rs1446942572 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:136648712 (GRCh38)
9:139543164 (GRCh37)
Canonical SPDI:: NC_000009.12:136648711:T:C
Gene:: HSPC324 (Varview), LOC102724193 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000019/5 (TOPMED)
C=0.000036/5 (GnomAD)
HGVS:: NC_000009.12:g.136648712T>C, NC_000009.11:g.139543164T>C, XR_930443.3:n.876T>C, XR_930443.2:n.438T>C, NR_135132.1:n.455A>G

Select item 144229104910.

rs1442291049 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>-,TT [Show Flanks]
Chromosome:: 9:136648687 (GRCh38)
9:139543139 (GRCh37)
Canonical SPDI:: NC_000009.12:136648686:TTTTTTT:TTTTTT,NC_000009.12:136648686:TTTTTTT:TTTTTTTT
Gene:: HSPC324 (Varview), LOC102724193 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
-=0.000071/1 (TOMMO)
HGVS:: NC_000009.12:g.136648693del, NC_000009.12:g.136648693dup, NC_000009.11:g.139543145del, NC_000009.11:g.139543145dup, NR_135132.1:n.480del, NR_135132.1:n.480dup

Select item 143165927311.

rs1431659273 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:136649037 (GRCh38)
9:139543489 (GRCh37)
Canonical SPDI:: NC_000009.12:136649036:A:G
Gene:: HSPC324 (Varview), LOC102724193 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000009.12:g.136649037A>G, NC_000009.11:g.139543489A>G, XR_930443.3:n.1201A>G, XR_930443.2:n.763A>G, XR_930443.1:n.37A>G, NR_135132.1:n.130T>C, XR_007061867.1:n.91A>G

Select item 142838257112.

rs1428382571 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:136648939 (GRCh38)
9:139543391 (GRCh37)
Canonical SPDI:: NC_000009.12:136648938:C:T
Gene:: HSPC324 (Varview), LOC102724193 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.136648939C>T, NC_000009.11:g.139543391C>T, XR_930443.3:n.1103C>T, XR_930443.2:n.665C>T, NR_135132.1:n.228G>A

Select item 141170331513.

rs1411703315 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 9:136648952 (GRCh38)
9:139543404 (GRCh37)
Canonical SPDI:: NC_000009.12:136648951:C:A
Gene:: HSPC324 (Varview), LOC102724193 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.136648952C>A, NC_000009.11:g.139543404C>A, XR_930443.3:n.1116C>A, XR_930443.2:n.678C>A, NR_135132.1:n.215G>T, XR_007061867.1:n.6C>A

Select item 140836902414.

rs1408369024 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:136649012 (GRCh38)
9:139543464 (GRCh37)
Canonical SPDI:: NC_000009.12:136649011:G:A
Gene:: HSPC324 (Varview), LOC102724193 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.00003/8 (TOPMED)
HGVS:: NC_000009.12:g.136649012G>A, NC_000009.11:g.139543464G>A, XR_930443.3:n.1176G>A, XR_930443.2:n.738G>A, XR_930443.1:n.12G>A, NR_135132.1:n.155C>T, XR_007061867.1:n.66G>A

Select item 140511422415.

rs1405114224 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:136648870 (GRCh38)
9:139543322 (GRCh37)
Canonical SPDI:: NC_000009.12:136648869:C:T
Gene:: HSPC324 (Varview), LOC102724193 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
T=0.000021/3 (GnomAD)
T=0.000106/3 (TOMMO)
HGVS:: NC_000009.12:g.136648870C>T, NC_000009.11:g.139543322C>T, XR_930443.3:n.1034C>T, XR_930443.2:n.596C>T, NR_135132.1:n.297G>A

Select item 138111128916.

rs1381111289 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 9:136648807 (GRCh38)
9:139543259 (GRCh37)
Canonical SPDI:: NC_000009.12:136648806:C:A,NC_000009.12:136648806:C:G,NC_000009.12:136648806:C:T
Gene:: HSPC324 (Varview), LOC102724193 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
A=0.000248/4 (TOMMO)
HGVS:: NC_000009.12:g.136648807C>A, NC_000009.12:g.136648807C>G, NC_000009.12:g.136648807C>T, NC_000009.11:g.139543259C>A, NC_000009.11:g.139543259C>G, NC_000009.11:g.139543259C>T, XR_930443.3:n.971C>A, XR_930443.3:n.971C>G, XR_930443.3:n.971C>T, XR_930443.2:n.533C>A, XR_930443.2:n.533C>G, XR_930443.2:n.533C>T, NR_135132.1:n.360G>T, NR_135132.1:n.360G>C, NR_135132.1:n.360G>A

Select item 137160875317.

rs1371608753 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:136660348 (GRCh38)
9:139554800 (GRCh37)
Canonical SPDI:: NC_000009.12:136660347:A:G
Gene:: EGFL7 (Varview), HSPC324 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000009.12:g.136660348A>G, NC_000009.11:g.139554800A>G, NR_135132.1:n.74T>C

Select item 135770809618.

rs1357708096 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:136660405 (GRCh38)
9:139554857 (GRCh37)
Canonical SPDI:: NC_000009.12:136660404:C:T
Gene:: EGFL7 (Varview), HSPC324 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000009.12:g.136660405C>T, NC_000009.11:g.139554857C>T, NR_135132.1:n.17G>A

Select item 135751523419.

rs1357515234 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:136649026 (GRCh38)
9:139543478 (GRCh37)
Canonical SPDI:: NC_000009.12:136649025:G:A
Gene:: HSPC324 (Varview), LOC102724193 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000019/5 (TOPMED)
HGVS:: NC_000009.12:g.136649026G>A, NC_000009.11:g.139543478G>A, XR_930443.3:n.1190G>A, XR_930443.2:n.752G>A, XR_930443.1:n.26G>A, NR_135132.1:n.141C>T, XR_007061867.1:n.80G>A

Select item 135705646620.

rs1357056466 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:136648785 (GRCh38)
9:139543237 (GRCh37)
Canonical SPDI:: NC_000009.12:136648784:C:T
Gene:: HSPC324 (Varview), LOC102724193 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000023/6 (TOPMED)
HGVS:: NC_000009.12:g.136648785C>T, NC_000009.11:g.139543237C>T, XR_930443.3:n.949C>T, XR_930443.2:n.511C>T, NR_135132.1:n.382G>A