SNP Links for Nucleotide (Select 998140208) - SNP

Links from Nucleotide

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Select item 14900075951.

rs1490007595 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:25067926 (GRCh38)
16:25079247 (GRCh37)
Canonical SPDI:: NC_000016.10:25067925:T:C
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.25067926T>C, NC_000016.9:g.25079247T>C, NR_135196.1:n.922T>C, NR_135197.1:n.908T>C

Select item 14892390192.

rs1489239019 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 16:25068495 (GRCh38)
16:25079816 (GRCh37)
Canonical SPDI:: NC_000016.10:25068494:G:C,NC_000016.10:25068494:G:T
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.25068495G>C, NC_000016.10:g.25068495G>T, NC_000016.9:g.25079816G>C, NC_000016.9:g.25079816G>T, NR_135196.1:n.1491G>C, NR_135196.1:n.1491G>T, NR_135197.1:n.1477G>C, NR_135197.1:n.1477G>T

Select item 14882833083.

rs1488283308 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 16:25068919 (GRCh38)
16:25080240 (GRCh37)
Canonical SPDI:: NC_000016.10:25068918:CT:
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000016.10:g.25068919_25068920del, NC_000016.9:g.25080240_25080241del, NR_135196.1:n.1915_1916del, NR_135197.1:n.1901_1902del

Select item 14881627054.

rs1488162705 [Homo sapiens]

Variant type:: DELINS
Alleles:: TGACCCGT>- [Show Flanks]
Chromosome:: 16:25068862 (GRCh38)
16:25080183 (GRCh37)
Canonical SPDI:: NC_000016.10:25068859:GTTGACCCGT:GT
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: GT=0./0 (ALFA)
HGVS:: NC_000016.10:g.25068862_25068869del, NC_000016.9:g.25080183_25080190del, NR_135196.1:n.1858_1865del, NR_135197.1:n.1844_1851del

Select item 14863480835.

rs1486348083 has merged into rs1482180479 [Homo sapiens]

Variant type:: DELINS
Alleles:: AACGGACCGCGGAGGCGGAGCC>-,AACGGACCGCGGAGGCGGAGCCAACGGACCGCGGAGGCGGAGCC [Show Flanks]
Chromosome:: 16:25066897 (GRCh38)
16:25078218 (GRCh37)
Canonical SPDI:: NC_000016.10:25066893:GCCAACGGACCGCGGAGGCGGAGCC:GCC,NC_000016.10:25066893:GCCAACGGACCGCGGAGGCGGAGCC:GCCAACGGACCGCGGAGGCGGAGCCAACGGACCGCGGAGGCGGAGCC
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GCC=0./0 (ALFA)
HGVS:: NC_000016.10:g.25066897_25066918del, NC_000016.10:g.25066897_25066918dup, NC_000016.9:g.25078218_25078239del, NC_000016.9:g.25078218_25078239dup, NR_135196.1:n.11_32del, NR_135196.1:n.11_32dup, NR_135197.1:n.11_32del, NR_135197.1:n.11_32dup

Select item 14821804796.

rs1482180479 [Homo sapiens]

Variant type:: DELINS
Alleles:: AACGGACCGCGGAGGCGGAGCC>-,AACGGACCGCGGAGGCGGAGCCAACGGACCGCGGAGGCGGAGCC [Show Flanks]
Chromosome:: 16:25066897 (GRCh38)
16:25078218 (GRCh37)
Canonical SPDI:: NC_000016.10:25066893:GCCAACGGACCGCGGAGGCGGAGCC:GCC,NC_000016.10:25066893:GCCAACGGACCGCGGAGGCGGAGCC:GCCAACGGACCGCGGAGGCGGAGCCAACGGACCGCGGAGGCGGAGCC
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GCC=0./0 (ALFA)
HGVS:: NC_000016.10:g.25066897_25066918del, NC_000016.10:g.25066897_25066918dup, NC_000016.9:g.25078218_25078239del, NC_000016.9:g.25078218_25078239dup, NR_135196.1:n.11_32del, NR_135196.1:n.11_32dup, NR_135197.1:n.11_32del, NR_135197.1:n.11_32dup

Select item 14821291087.

rs1482129108 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 16:25068605 (GRCh38)
16:25079926 (GRCh37)
Canonical SPDI:: NC_000016.10:25068604:G:C
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.25068605G>C, NC_000016.9:g.25079926G>C, NR_135196.1:n.1601G>C, NR_135197.1:n.1587G>C

Select item 14816979918.

rs1481697991 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:25067135 (GRCh38)
16:25078456 (GRCh37)
Canonical SPDI:: NC_000016.10:25067134:T:C
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.25067135T>C, NC_000016.9:g.25078456T>C, NR_135196.1:n.249T>C, NR_135197.1:n.249T>C

Select item 14804440549.

rs1480444054 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:25067247 (GRCh38)
16:25078568 (GRCh37)
Canonical SPDI:: NC_000016.10:25067246:C:T
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000071/1 (TOMMO)
HGVS:: NC_000016.10:g.25067247C>T, NC_000016.9:g.25078568C>T, NR_135196.1:n.361C>T, NR_135197.1:n.361C>T

Select item 148024815110.

rs1480248151 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 16:25067226 (GRCh38)
16:25078547 (GRCh37)
Canonical SPDI:: NC_000016.10:25067225:C:A
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000016.10:g.25067226C>A, NC_000016.9:g.25078547C>A, NR_135196.1:n.340C>A, NR_135197.1:n.340C>A

Select item 147618762611.

rs1476187626 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 16:25067559 (GRCh38)
16:25078880 (GRCh37)
Canonical SPDI:: NC_000016.10:25067558:A:T
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000016.10:g.25067559A>T, NC_000016.9:g.25078880A>T, NR_135196.1:n.673A>T, NR_135197.1:n.673A>T

Select item 147187713812.

rs1471877138 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:25066929 (GRCh38)
16:25078250 (GRCh37)
Canonical SPDI:: NC_000016.10:25066928:G:A
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.25066929G>A, NC_000016.9:g.25078250G>A, NR_135196.1:n.43G>A, NR_135197.1:n.43G>A

Select item 147037013713.

rs1470370137 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 16:25067634 (GRCh38)
16:25078955 (GRCh37)
Canonical SPDI:: NC_000016.10:25067633:A:G
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.25067634A>G, NC_000016.9:g.25078955A>G, NR_135196.1:n.748A>G, NR_135197.1:n.748A>G

Select item 146720493614.

rs1467204936 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 16:25068639 (GRCh38)
16:25079960 (GRCh37)
Canonical SPDI:: NC_000016.10:25068638:A:G,NC_000016.10:25068638:A:T
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.25068639A>G, NC_000016.10:g.25068639A>T, NC_000016.9:g.25079960A>G, NC_000016.9:g.25079960A>T, NR_135196.1:n.1635A>G, NR_135196.1:n.1635A>T, NR_135197.1:n.1621A>G, NR_135197.1:n.1621A>T

Select item 146648264115.

rs1466482641 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 16:25068730 (GRCh38)
16:25080051 (GRCh37)
Canonical SPDI:: NC_000016.10:25068729:T:A
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.25068730T>A, NC_000016.9:g.25080051T>A, NR_135196.1:n.1726T>A, NR_135197.1:n.1712T>A

Select item 146356433916.

rs1463564339 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 16:25067240 (GRCh38)
16:25078561 (GRCh37)
Canonical SPDI:: NC_000016.10:25067239:C:G
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000016.10:g.25067240C>G, NC_000016.9:g.25078561C>G, NR_135196.1:n.354C>G, NR_135197.1:n.354C>G

Select item 146237530917.

rs1462375309 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 16:25066941 (GRCh38)
16:25078262 (GRCh37)
Canonical SPDI:: NC_000016.10:25066940:G:C,NC_000016.10:25066940:G:T
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000023/6 (TOPMED)
HGVS:: NC_000016.10:g.25066941G>C, NC_000016.10:g.25066941G>T, NC_000016.9:g.25078262G>C, NC_000016.9:g.25078262G>T, NR_135196.1:n.55G>C, NR_135196.1:n.55G>T, NR_135197.1:n.55G>C, NR_135197.1:n.55G>T

Select item 146218038318.

rs1462180383 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:25068036 (GRCh38)
16:25079357 (GRCh37)
Canonical SPDI:: NC_000016.10:25068035:G:A
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.25068036G>A, NC_000016.9:g.25079357G>A, NR_135196.1:n.1032G>A, NR_135197.1:n.1018G>A

Select item 146089209919.

rs1460892099 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 16:25068158 (GRCh38)
16:25079479 (GRCh37)
Canonical SPDI:: NC_000016.10:25068157:A:T
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000016.10:g.25068158A>T, NC_000016.9:g.25079479A>T, NR_135196.1:n.1154A>T, NR_135197.1:n.1140A>T

Select item 145681383820.

rs1456813838 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 16:25066926 (GRCh38)
16:25078247 (GRCh37)
Canonical SPDI:: NC_000016.10:25066925:T:G
Gene:: LINC02175 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000016.10:g.25066926T>G, NC_000016.9:g.25078247T>G, NR_135196.1:n.40T>G, NR_135197.1:n.40T>G

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