SNP Links for PMC (Select 6425305) - SNP

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Links from PMC

Select item 116494761.

rs11649476 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:70702849 (GRCh38)
16:70736752 (GRCh37)
Canonical SPDI:: NC_000016.10:70702848:C:T
Gene:: VAC14 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.423412/30224 (ALFA)
T=0.046397/85 (Korea1K)
T=0.050992/149 (KOREAN)
T=0.103334/1732 (TOMMO)
T=0.215566/385 (HapMap)
T=0.232667/1165 (1000Genomes)
T=0.267754/558 (HGDP_Stanford)
T=0.316476/83768 (TOPMED)
T=0.328704/71 (Qatari)
T=0.335697/47017 (GnomAD)
C=0.375/12 (Siberian)
C=0.402174/74 (SGDP_PRJ)
T=0.423848/423 (GoNL)
T=0.426667/256 (NorthernSweden)
T=0.451187/1673 (TWINSUK)
T=0.462896/1784 (ALSPAC)
C=0.487805/40 (PRJEB36033)
T=0.49442/2215 (Estonian)
HGVS:: NC_000016.10:g.70702849C>T, NC_000016.9:g.70736752C>T, NG_054902.1:g.103321G>A

Select item 107924212.

rs10792421 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 11:63837705 (GRCh38)
11:63605177 (GRCh37)
Canonical SPDI:: NC_000011.10:63837704:G:A,NC_000011.10:63837704:G:C,NC_000011.10:63837704:G:T
Gene:: MARK2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.45525/65220 (ALFA)
T=0./0 (KOREAN)
G=0.10889/1825 (TOMMO)
G=0.169811/36 (Vietnamese)
G=0.194175/80 (SGDP_PRJ)
G=0.25/12 (Siberian)
G=0.275/11 (GENOME_DK)
G=0.433316/1670 (ALSPAC)
G=0.441884/441 (GoNL)
G=0.447768/2006 (Estonian)
A=0.450794/852 (HapMap)
G=0.452265/1677 (TWINSUK)
A=0.465953/65212 (GnomAD)
A=0.472222/102 (Qatari)
A=0.479648/126958 (TOPMED)
G=0.493333/296 (NorthernSweden)
A=0.499219/2500 (1000Genomes)
HGVS:: NC_000011.10:g.63837705G>A, NC_000011.10:g.63837705G>C, NC_000011.10:g.63837705G>T, NC_000011.9:g.63605177G>A, NC_000011.9:g.63605177G>C, NC_000011.9:g.63605177G>T, NG_029771.1:g.3778G>A, NG_029771.1:g.3778G>C, NG_029771.1:g.3778G>T