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Links from Protein

Items: 1 to 20 of 1066

1.

rs1490505043 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    G>A,C [Show Flanks]
    Chromosome:
    5:141332230 (GRCh38)
    5:140711797 (GRCh37)
    Canonical SPDI:
    NC_000005.10:141332229:G:A,NC_000005.10:141332229:G:C
    Gene:
    PCDHGA1 (Varview)
    Functional Consequence:
    missense_variant,coding_sequence_variant
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    A=0./0 (ALFA)
    A=0./0 (GnomAD)
    C=0.000004/1 (GnomAD_exomes)
    HGVS:
    2.

    rs1490317405 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      T>C [Show Flanks]
      Chromosome:
      5:141331932 (GRCh38)
      5:140711499 (GRCh37)
      Canonical SPDI:
      NC_000005.10:141331931:T:C
      Gene:
      PCDHGA1 (Varview)
      Functional Consequence:
      synonymous_variant,coding_sequence_variant
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      C=0./0 (ALFA)
      C=0.000004/1 (GnomAD_exomes)
      C=0.000004/1 (TOPMED)
      C=0.000007/1 (GnomAD)
      HGVS:
      3.

      rs1490291977 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        T>C [Show Flanks]
        Chromosome:
        5:141332540 (GRCh38)
        5:140712107 (GRCh37)
        Canonical SPDI:
        NC_000005.10:141332539:T:C
        Gene:
        PCDHGA1 (Varview)
        Functional Consequence:
        missense_variant,coding_sequence_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        C=0./0 (ALFA)
        C=0.000004/1 (TOPMED)
        C=0.000007/1 (GnomAD)
        HGVS:
        4.

        rs1489228073 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          T>A [Show Flanks]
          Chromosome:
          5:141331113 (GRCh38)
          5:140710680 (GRCh37)
          Canonical SPDI:
          NC_000005.10:141331112:T:A
          Gene:
          PCDHGA1 (Varview)
          Functional Consequence:
          missense_variant,coding_sequence_variant
          Validated:
          by frequency
          MAF:
          A=0.000004/1 (GnomAD_exomes)
          HGVS:
          5.

          rs1485532111 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            C>A [Show Flanks]
            Chromosome:
            5:141332682 (GRCh38)
            5:140712249 (GRCh37)
            Canonical SPDI:
            NC_000005.10:141332681:C:A
            Gene:
            PCDHGA1 (Varview)
            Functional Consequence:
            missense_variant,coding_sequence_variant
            Validated:
            by frequency
            MAF:
            A=0.000012/3 (GnomAD_exomes)
            HGVS:
            6.

            rs1483435682 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              G>A [Show Flanks]
              Chromosome:
              5:141331354 (GRCh38)
              5:140710921 (GRCh37)
              Canonical SPDI:
              NC_000005.10:141331353:G:A
              Gene:
              PCDHGA1 (Varview)
              Functional Consequence:
              missense_variant,coding_sequence_variant
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              A=0./0 (ALFA)
              A=0.000007/1 (GnomAD)
              A=0.000011/3 (TOPMED)
              HGVS:
              7.

              rs1482002302 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                A>C,T [Show Flanks]
                Chromosome:
                5:141330889 (GRCh38)
                5:140710456 (GRCh37)
                Canonical SPDI:
                NC_000005.10:141330888:A:C,NC_000005.10:141330888:A:T
                Gene:
                PCDHGA1 (Varview)
                Functional Consequence:
                synonymous_variant,coding_sequence_variant,stop_gained
                Validated:
                by frequency,by alfa
                MAF:
                C=0./0 (ALFA)
                T=0.000004/1 (GnomAD_exomes)
                HGVS:
                8.

                rs1481641747 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  G>T [Show Flanks]
                  Chromosome:
                  5:141330808 (GRCh38)
                  5:140710375 (GRCh37)
                  Canonical SPDI:
                  NC_000005.10:141330807:G:T
                  Gene:
                  PCDHGA1 (Varview)
                  Functional Consequence:
                  missense_variant,coding_sequence_variant
                  Validated:
                  by frequency
                  MAF:
                  T=0.000004/1 (GnomAD_exomes)
                  HGVS:
                  9.

                  rs1481429509 [Homo sapiens]
                    Variant type:
                    DELINS
                    Alleles:
                    ->A [Show Flanks]
                    Chromosome:
                    5:141331420 (GRCh38)
                    5:140710988 (GRCh37)
                    Canonical SPDI:
                    NC_000005.10:141331420:AA:AAA
                    Gene:
                    PCDHGA1 (Varview)
                    Functional Consequence:
                    coding_sequence_variant,frameshift_variant
                    Validated:
                    by frequency,by alfa,by cluster
                    MAF:
                    AAA=0./0 (ALFA)
                    A=0.000007/1 (GnomAD)
                    HGVS:
                    10.

                    rs1480320459 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      C>T [Show Flanks]
                      Chromosome:
                      5:141331856 (GRCh38)
                      5:140711423 (GRCh37)
                      Canonical SPDI:
                      NC_000005.10:141331855:C:T
                      Gene:
                      PCDHGA1 (Varview)
                      Functional Consequence:
                      missense_variant,coding_sequence_variant
                      Validated:
                      by frequency,by alfa,by cluster
                      MAF:
                      T=0.000094/1 (ALFA)
                      T=0.000004/1 (GnomAD_exomes)
                      T=0.000004/1 (TOPMED)
                      T=0.000007/1 (GnomAD)
                      HGVS:
                      11.

                      rs1479090221 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        G>T [Show Flanks]
                        Chromosome:
                        5:141330732 (GRCh38)
                        5:140710299 (GRCh37)
                        Canonical SPDI:
                        NC_000005.10:141330731:G:T
                        Gene:
                        PCDHGA1 (Varview)
                        Functional Consequence:
                        synonymous_variant,coding_sequence_variant
                        Validated:
                        by frequency,by alfa
                        MAF:
                        T=0./0 (ALFA)
                        T=0.000019/5 (TOPMED)
                        HGVS:
                        12.

                        rs1478404156 [Homo sapiens]
                          Variant type:
                          SNV
                          Alleles:
                          G>A [Show Flanks]
                          Chromosome:
                          5:141330726 (GRCh38)
                          5:140710293 (GRCh37)
                          Canonical SPDI:
                          NC_000005.10:141330725:G:A
                          Gene:
                          PCDHGA1 (Varview)
                          Functional Consequence:
                          missense_variant,coding_sequence_variant
                          Validated:
                          by frequency
                          MAF:
                          A=0.000004/1 (GnomAD_exomes)
                          HGVS:
                          13.

                          rs1477917877 [Homo sapiens]
                            Variant type:
                            SNV
                            Alleles:
                            A>G [Show Flanks]
                            Chromosome:
                            5:141332311 (GRCh38)
                            5:140711878 (GRCh37)
                            Canonical SPDI:
                            NC_000005.10:141332310:A:G
                            Gene:
                            PCDHGA1 (Varview)
                            Functional Consequence:
                            missense_variant,coding_sequence_variant
                            Validated:
                            by frequency,by alfa,by cluster
                            MAF:
                            G=0./0 (ALFA)
                            G=0.000011/3 (TOPMED)
                            G=0.000021/3 (GnomAD)
                            G=0.000072/18 (GnomAD_exomes)
                            G=0.000091/11 (ExAC)
                            HGVS:
                            14.

                            rs1477173987 [Homo sapiens]
                              Variant type:
                              DELINS
                              Alleles:
                              GAG>- [Show Flanks]
                              Chromosome:
                              5:141511162 (GRCh38)
                              5:140890729 (GRCh37)
                              Canonical SPDI:
                              NC_000005.10:141511159:AGGAG:AG
                              Gene:
                              PCDHGC3 (Varview), PCDHGB4 (Varview), PCDHGA8 (Varview), PCDHGA12 (Varview), PCDHGC5 (Varview), PCDHGC4 (Varview), PCDHGB7 (Varview), PCDHGB6 (Varview), PCDHGB5 (Varview), PCDHGB3 (Varview), PCDHGB2 (Varview), PCDHGB1 (Varview), PCDHGA11 (Varview), PCDHGA10 (Varview), PCDHGA9 (Varview), PCDHGA7 (Varview), PCDHGA6 (Varview), PCDHGA5 (Varview), PCDHGA4 (Varview), PCDHGA3 (Varview), PCDHGA2 (Varview), PCDHGA1 (Varview)
                              Functional Consequence:
                              inframe_deletion,genic_downstream_transcript_variant,coding_sequence_variant
                              Validated:
                              by frequency
                              MAF:
                              -=0.000004/1 (GnomAD_exomes)
                              HGVS:
                              NC_000005.10:g.141511162_141511164del, NC_000005.9:g.140890729_140890731del, NG_000012.2:g.221359_221361del, NG_050746.1:g.30989_30991del, NM_018928.3:c.2806_2808del, NM_018928.2:c.2806_2808del, NM_001386884.1:c.376_378del, NM_018924.5:c.2779_2781del, NM_018924.4:c.2779_2781del, NM_018924.3:c.2779_2781del, NM_018924.2:c.2779_2781del, NM_018915.4:c.2788_2790del, NM_018915.3:c.2788_2790del, NM_018915.2:c.2788_2790del, NM_018916.4:c.2788_2790del, NM_018916.3:c.2788_2790del, NM_018917.4:c.2878_2880del, NM_018917.3:c.2878_2880del, NM_018917.2:c.2785_2787del, NM_018927.4:c.2779_2781del, NM_018927.3:c.2779_2781del, NM_003736.4:c.2761_2763del, NM_003736.3:c.2761_2763del, NM_003736.2:c.2761_2763del, NM_018920.4:c.2788_2790del, NM_018920.3:c.2788_2790del, NM_018920.2:c.2788_2790del, NM_002588.4:c.2794_2796del, NM_002588.3:c.2794_2796del, NM_002588.2:c.2794_2796del, NM_003735.3:c.2788_2790del, NM_003735.2:c.2788_2790del, NM_018913.3:c.2800_2802del, NM_018913.2:c.2800_2802del, NM_018929.3:c.2824_2826del, NM_018929.2:c.2824_2826del, NM_018919.3:c.2788_2790del, NM_018919.2:c.2788_2790del, NM_018914.3:c.2797_2799del, NM_018914.2:c.2797_2799del, NM_018926.3:c.2782_2784del, NM_018926.2:c.2782_2784del, NM_018921.3:c.2788_2790del, NM_018921.2:c.2788_2790del, NM_018912.3:c.2785_2787del, NM_018912.2:c.2785_2787del, NM_018918.3:c.2785_2787del, NM_018918.2:c.2785_2787del, NM_018925.3:c.2761_2763del, NM_018925.2:c.2761_2763del, NM_018922.3:c.2773_2775del, NM_018922.2:c.2773_2775del, NM_018923.3:c.2785_2787del, NM_018923.2:c.2785_2787del, NM_032403.3:c.394_396del, NM_032403.2:c.394_396del, NM_032403.1:c.394_396del, NM_032088.2:c.2788_2790del, NM_032088.1:c.2788_2790del, NM_032092.2:c.2242_2244del, NM_032092.1:c.2242_2244del, NP_061751.1:p.Glu936del, NP_001373813.1:p.Glu126del, NP_061747.2:p.Glu927del, NP_061738.1:p.Glu930del, NP_061739.2:p.Glu930del, NP_061740.2:p.Glu960del, NP_061750.1:p.Glu927del, NP_003727.1:p.Glu921del, NP_061743.1:p.Glu930del, NP_002579.2:p.Glu932del, NP_003726.1:p.Glu930del, NP_061736.1:p.Glu934del, NP_061752.1:p.Glu942del, NP_061742.1:p.Glu930del, NP_061737.1:p.Glu933del, NP_061749.1:p.Glu928del, NP_061744.1:p.Glu930del, NP_061735.1:p.Glu929del, NP_061741.1:p.Glu929del, NP_061748.1:p.Glu921del, NP_061745.1:p.Glu925del, NP_061746.1:p.Glu929del, NP_115779.1:p.Glu132del, NP_114477.1:p.Glu930del, NP_114481.1:p.Glu748del
                              15.

                              rs1475890417 [Homo sapiens]
                                Variant type:
                                SNV
                                Alleles:
                                A>G [Show Flanks]
                                Chromosome:
                                5:141330824 (GRCh38)
                                5:140710391 (GRCh37)
                                Canonical SPDI:
                                NC_000005.10:141330823:A:G
                                Gene:
                                PCDHGA1 (Varview)
                                Functional Consequence:
                                missense_variant,coding_sequence_variant
                                Validated:
                                by frequency,by alfa,by cluster
                                MAF:
                                G=0./0 (ALFA)
                                G=0.000004/1 (TOPMED)
                                G=0.000007/1 (GnomAD)
                                HGVS:
                                16.

                                rs1473736492 [Homo sapiens]
                                  Variant type:
                                  SNV
                                  Alleles:
                                  C>T [Show Flanks]
                                  Chromosome:
                                  5:141510965 (GRCh38)
                                  5:140890532 (GRCh37)
                                  Canonical SPDI:
                                  NC_000005.10:141510964:C:T
                                  Gene:
                                  PCDHGC3 (Varview), PCDHGB4 (Varview), PCDHGA8 (Varview), PCDHGA12 (Varview), PCDHGC5 (Varview), PCDHGC4 (Varview), PCDHGB7 (Varview), PCDHGB6 (Varview), PCDHGB5 (Varview), PCDHGB3 (Varview), PCDHGB2 (Varview), PCDHGB1 (Varview), PCDHGA11 (Varview), PCDHGA10 (Varview), PCDHGA9 (Varview), PCDHGA7 (Varview), PCDHGA6 (Varview), PCDHGA5 (Varview), PCDHGA4 (Varview), PCDHGA3 (Varview), PCDHGA2 (Varview), PCDHGA1 (Varview)
                                  Functional Consequence:
                                  genic_downstream_transcript_variant,missense_variant,coding_sequence_variant
                                  Validated:
                                  by frequency,by alfa,by cluster
                                  MAF:
                                  T=0./0 (ALFA)
                                  T=0.000007/1 (GnomAD)
                                  T=0.000008/2 (GnomAD_exomes)
                                  HGVS:
                                  NC_000005.10:g.141510965C>T, NC_000005.9:g.140890532C>T, NG_000012.2:g.221162C>T, NG_050746.1:g.30792C>T, NM_018928.3:c.2609C>T, NM_018928.2:c.2609C>T, NM_001386884.1:c.179C>T, NM_018924.5:c.2582C>T, NM_018924.4:c.2582C>T, NM_018924.3:c.2582C>T, NM_018924.2:c.2582C>T, NM_018915.4:c.2591C>T, NM_018915.3:c.2591C>T, NM_018915.2:c.2591C>T, NM_018916.4:c.2591C>T, NM_018916.3:c.2591C>T, NM_018917.4:c.2681C>T, NM_018917.3:c.2681C>T, NM_018917.2:c.2588C>T, NM_018927.4:c.2582C>T, NM_018927.3:c.2582C>T, NM_003736.4:c.2564C>T, NM_003736.3:c.2564C>T, NM_003736.2:c.2564C>T, NM_018920.4:c.2591C>T, NM_018920.3:c.2591C>T, NM_018920.2:c.2591C>T, NM_002588.4:c.2597C>T, NM_002588.3:c.2597C>T, NM_002588.2:c.2597C>T, NM_003735.3:c.2591C>T, NM_003735.2:c.2591C>T, NM_018913.3:c.2603C>T, NM_018913.2:c.2603C>T, NM_018929.3:c.2627C>T, NM_018929.2:c.2627C>T, NM_018919.3:c.2591C>T, NM_018919.2:c.2591C>T, NM_018914.3:c.2600C>T, NM_018914.2:c.2600C>T, NM_018926.3:c.2585C>T, NM_018926.2:c.2585C>T, NM_018921.3:c.2591C>T, NM_018921.2:c.2591C>T, NM_018912.3:c.2588C>T, NM_018912.2:c.2588C>T, NM_018918.3:c.2588C>T, NM_018918.2:c.2588C>T, NM_018925.3:c.2564C>T, NM_018925.2:c.2564C>T, NM_018922.3:c.2576C>T, NM_018922.2:c.2576C>T, NM_018923.3:c.2588C>T, NM_018923.2:c.2588C>T, NM_032403.3:c.197C>T, NM_032403.2:c.197C>T, NM_032403.1:c.197C>T, NM_032088.2:c.2591C>T, NM_032088.1:c.2591C>T, NM_032092.2:c.2045C>T, NM_032092.1:c.2045C>T, NP_061751.1:p.Ser870Phe, NP_001373813.1:p.Ser60Phe, NP_061747.2:p.Ser861Phe, NP_061738.1:p.Ser864Phe, NP_061739.2:p.Ser864Phe, NP_061740.2:p.Ser894Phe, NP_061750.1:p.Ser861Phe, NP_003727.1:p.Ser855Phe, NP_061743.1:p.Ser864Phe, NP_002579.2:p.Ser866Phe, NP_003726.1:p.Ser864Phe, NP_061736.1:p.Ser868Phe, NP_061752.1:p.Ser876Phe, NP_061742.1:p.Ser864Phe, NP_061737.1:p.Ser867Phe, NP_061749.1:p.Ser862Phe, NP_061744.1:p.Ser864Phe, NP_061735.1:p.Ser863Phe, NP_061741.1:p.Ser863Phe, NP_061748.1:p.Ser855Phe, NP_061745.1:p.Ser859Phe, NP_061746.1:p.Ser863Phe, NP_115779.1:p.Ser66Phe, NP_114477.1:p.Ser864Phe, NP_114481.1:p.Ser682Phe
                                  17.

                                  rs1473447164 [Homo sapiens]
                                    Variant type:
                                    SNV
                                    Alleles:
                                    G>C [Show Flanks]
                                    Chromosome:
                                    5:141332235 (GRCh38)
                                    5:140711802 (GRCh37)
                                    Canonical SPDI:
                                    NC_000005.10:141332234:G:C
                                    Gene:
                                    PCDHGA1 (Varview)
                                    Functional Consequence:
                                    synonymous_variant,coding_sequence_variant
                                    Validated:
                                    by frequency
                                    MAF:
                                    C=0.000004/1 (GnomAD_exomes)
                                    HGVS:
                                    18.

                                    rs1472337784 [Homo sapiens]
                                      Variant type:
                                      SNV
                                      Alleles:
                                      T>C [Show Flanks]
                                      Chromosome:
                                      5:141330899 (GRCh38)
                                      5:140710466 (GRCh37)
                                      Canonical SPDI:
                                      NC_000005.10:141330898:T:C
                                      Gene:
                                      PCDHGA1 (Varview)
                                      Functional Consequence:
                                      missense_variant,coding_sequence_variant
                                      Validated:
                                      by frequency
                                      MAF:
                                      C=0.000008/2 (GnomAD_exomes)
                                      HGVS:
                                      19.

                                      rs1472021763 [Homo sapiens]
                                        Variant type:
                                        SNV
                                        Alleles:
                                        A>T [Show Flanks]
                                        Chromosome:
                                        5:141331235 (GRCh38)
                                        5:140710802 (GRCh37)
                                        Canonical SPDI:
                                        NC_000005.10:141331234:A:T
                                        Gene:
                                        PCDHGA1 (Varview)
                                        Functional Consequence:
                                        missense_variant,coding_sequence_variant
                                        Validated:
                                        by frequency,by alfa
                                        MAF:
                                        T=0./0 (ALFA)
                                        T=0.000004/1 (TOPMED)
                                        HGVS:
                                        20.

                                        rs1471696024 [Homo sapiens]
                                          Variant type:
                                          SNV
                                          Alleles:
                                          C>G [Show Flanks]
                                          Chromosome:
                                          5:141331646 (GRCh38)
                                          5:140711213 (GRCh37)
                                          Canonical SPDI:
                                          NC_000005.10:141331645:C:G
                                          Gene:
                                          PCDHGA1 (Varview)
                                          Functional Consequence:
                                          missense_variant,coding_sequence_variant
                                          Validated:
                                          by frequency,by alfa
                                          MAF:
                                          G=0./0 (ALFA)
                                          HGVS:

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