SNP Links for Protein (Select 116063556) - SNP

Links from Protein

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Select item 14891211561.

rs1489121156 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:100539917 (GRCh38)
1:101005473 (GRCh37)
Canonical SPDI:: NC_000001.11:100539916:G:A
Gene:: GPR88 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
HGVS:: NC_000001.11:g.100539917G>A, NC_000001.10:g.101005473G>A, NG_053134.1:g.6746G>A, NM_022049.3:c.951G>A, NM_022049.2:c.951G>A

Select item 14883849122.

rs1488384912 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:100539508 (GRCh38)
1:101005064 (GRCh37)
Canonical SPDI:: NC_000001.11:100539507:C:T
Gene:: GPR88 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0./0 (GnomAD)
T=0.000033/3 (GnomAD_exomes)
HGVS:: NC_000001.11:g.100539508C>T, NC_000001.10:g.101005064C>T, NG_053134.1:g.6337C>T, NM_022049.3:c.542C>T, NM_022049.2:c.542C>T, NP_071332.2:p.Pro181Leu

Select item 14828774273.

rs1482877427 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:100539299 (GRCh38)
1:101004855 (GRCh37)
Canonical SPDI:: NC_000001.11:100539298:C:T
Gene:: GPR88 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: T=0.000047/1 (ALFA)
T=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.100539299C>T, NC_000001.10:g.101004855C>T, NG_053134.1:g.6128C>T, NM_022049.3:c.333C>T, NM_022049.2:c.333C>T

Select item 14806468504.

rs1480646850 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:100539635 (GRCh38)
1:101005191 (GRCh37)
Canonical SPDI:: NC_000001.11:100539634:C:T
Gene:: GPR88 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
HGVS:: NC_000001.11:g.100539635C>T, NC_000001.10:g.101005191C>T, NG_053134.1:g.6464C>T, NM_022049.3:c.669C>T, NM_022049.2:c.669C>T

Select item 14793896175.

rs1479389617 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:100539557 (GRCh38)
1:101005113 (GRCh37)
Canonical SPDI:: NC_000001.11:100539556:C:T
Gene:: GPR88 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.100539557C>T, NC_000001.10:g.101005113C>T, NG_053134.1:g.6386C>T, NM_022049.3:c.591C>T, NM_022049.2:c.591C>T

Select item 14771235626.

rs1477123562 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:100539511 (GRCh38)
1:101005067 (GRCh37)
Canonical SPDI:: NC_000001.11:100539510:G:A,NC_000001.11:100539510:G:T
Gene:: GPR88 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.100539511G>A, NC_000001.11:g.100539511G>T, NC_000001.10:g.101005067G>A, NC_000001.10:g.101005067G>T, NG_053134.1:g.6340G>A, NG_053134.1:g.6340G>T, NM_022049.3:c.545G>A, NM_022049.3:c.545G>T, NM_022049.2:c.545G>A, NM_022049.2:c.545G>T, NP_071332.2:p.Arg182Gln, NP_071332.2:p.Arg182Leu

Select item 14768937047.

rs1476893704 [Homo sapiens]

Variant type:: DEL
Alleles:: C>- [Show Flanks]
Chromosome:: 1:100539552 (GRCh38)
1:101005108 (GRCh37)
Canonical SPDI:: NC_000001.11:100539551:C:
Gene:: GPR88 (Varview)
Functional Consequence:: coding_sequence_variant,frameshift_variant
HGVS:: NC_000001.11:g.100539552del, NC_000001.10:g.101005108del, NG_053134.1:g.6381del, NM_022049.3:c.586del, NM_022049.2:c.586del, NP_071332.2:p.Leu196fs

Select item 14735162938.

rs1473516293 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:100539550 (GRCh38)
1:101005106 (GRCh37)
Canonical SPDI:: NC_000001.11:100539549:T:C
Gene:: GPR88 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
C=0.000024/2 (GnomAD_exomes)
HGVS:: NC_000001.11:g.100539550T>C, NC_000001.10:g.101005106T>C, NG_053134.1:g.6379T>C, NM_022049.3:c.584T>C, NM_022049.2:c.584T>C, NP_071332.2:p.Leu195Pro

Select item 14719380099.

rs1471938009 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:100539950 (GRCh38)
1:101005506 (GRCh37)
Canonical SPDI:: NC_000001.11:100539949:G:T
Gene:: GPR88 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.00001/2 (GnomAD_exomes)
HGVS:: NC_000001.11:g.100539950G>T, NC_000001.10:g.101005506G>T, NG_053134.1:g.6779G>T, NM_022049.3:c.984G>T, NM_022049.2:c.984G>T

Select item 147030078310.

rs1470300783 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:100539758 (GRCh38)
1:101005314 (GRCh37)
Canonical SPDI:: NC_000001.11:100539757:G:C
Gene:: GPR88 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.100539758G>C, NC_000001.10:g.101005314G>C, NG_053134.1:g.6587G>C, NM_022049.3:c.792G>C, NM_022049.2:c.792G>C, NP_071332.2:p.Gln264His

Select item 147024500311.

rs1470245003 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:100539880 (GRCh38)
1:101005436 (GRCh37)
Canonical SPDI:: NC_000001.11:100539879:T:C
Gene:: GPR88 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.0002/1 (ALFA)
C=0.0002/1 (Estonian)
HGVS:: NC_000001.11:g.100539880T>C, NC_000001.10:g.101005436T>C, NG_053134.1:g.6709T>C, NM_022049.3:c.914T>C, NM_022049.2:c.914T>C, NP_071332.2:p.Leu305Pro

Select item 146907375312.

rs1469073753 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:100539394 (GRCh38)
1:101004950 (GRCh37)
Canonical SPDI:: NC_000001.11:100539393:C:A
Gene:: GPR88 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
HGVS:: NC_000001.11:g.100539394C>A, NC_000001.10:g.101004950C>A, NG_053134.1:g.6223C>A, NM_022049.3:c.428C>A, NM_022049.2:c.428C>A, NP_071332.2:p.Thr143Asn

Select item 146700975513.

rs1467009755 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:100540025 (GRCh38)
1:101005581 (GRCh37)
Canonical SPDI:: NC_000001.11:100540024:C:A
Gene:: GPR88 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.100540025C>A, NC_000001.10:g.101005581C>A, NG_053134.1:g.6854C>A, NM_022049.3:c.1059C>A, NM_022049.2:c.1059C>A

Select item 146654009714.

rs1466540097 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 1:100539200 (GRCh38)
1:101004756 (GRCh37)
Canonical SPDI:: NC_000001.11:100539199:C:G,NC_000001.11:100539199:C:T
Gene:: GPR88 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000001.11:g.100539200C>G, NC_000001.11:g.100539200C>T, NC_000001.10:g.101004756C>G, NC_000001.10:g.101004756C>T, NG_053134.1:g.6029C>G, NG_053134.1:g.6029C>T, NM_022049.3:c.234C>G, NM_022049.3:c.234C>T, NM_022049.2:c.234C>G, NM_022049.2:c.234C>T

Select item 146515744815.

rs1465157448 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:100540080 (GRCh38)
1:101005636 (GRCh37)
Canonical SPDI:: NC_000001.11:100540079:C:T
Gene:: GPR88 (Varview)
Functional Consequence:: coding_sequence_variant,stop_gained
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.100540080C>T, NC_000001.10:g.101005636C>T, NG_053134.1:g.6909C>T, NM_022049.3:c.1114C>T, NM_022049.2:c.1114C>T, NP_071332.2:p.Gln372Ter

Select item 146513533516.

rs1465135335 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:100539847 (GRCh38)
1:101005403 (GRCh37)
Canonical SPDI:: NC_000001.11:100539846:T:C
Gene:: GPR88 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.100539847T>C, NC_000001.10:g.101005403T>C, NG_053134.1:g.6676T>C, NM_022049.3:c.881T>C, NM_022049.2:c.881T>C, NP_071332.2:p.Leu294Pro

Select item 146354560417.

rs1463545604 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:100539401 (GRCh38)
1:101004957 (GRCh37)
Canonical SPDI:: NC_000001.11:100539400:G:T
Gene:: GPR88 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.100539401G>T, NC_000001.10:g.101004957G>T, NG_053134.1:g.6230G>T, NM_022049.3:c.435G>T, NM_022049.2:c.435G>T

Select item 146214199818.

rs1462141998 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:100540083 (GRCh38)
1:101005639 (GRCh37)
Canonical SPDI:: NC_000001.11:100540082:G:C
Gene:: GPR88 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.100540083G>C, NC_000001.10:g.101005639G>C, NG_053134.1:g.6912G>C, NM_022049.3:c.1117G>C, NM_022049.2:c.1117G>C, NP_071332.2:p.Ala373Pro

Select item 146056933919.

rs1460569339 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 1:100539523 (GRCh38)
1:101005079 (GRCh37)
Canonical SPDI:: NC_000001.11:100539522:C:A,NC_000001.11:100539522:C:T
Gene:: GPR88 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.100539523C>A, NC_000001.11:g.100539523C>T, NC_000001.10:g.101005079C>A, NC_000001.10:g.101005079C>T, NG_053134.1:g.6352C>A, NG_053134.1:g.6352C>T, NM_022049.3:c.557C>A, NM_022049.3:c.557C>T, NM_022049.2:c.557C>A, NM_022049.2:c.557C>T, NP_071332.2:p.Ala186Glu, NP_071332.2:p.Ala186Val

Select item 145916821720.

rs1459168217 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:100539379 (GRCh38)
1:101004935 (GRCh37)
Canonical SPDI:: NC_000001.11:100539378:G:A
Gene:: GPR88 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.100539379G>A, NC_000001.10:g.101004935G>A, NG_053134.1:g.6208G>A, NM_022049.3:c.413G>A, NM_022049.2:c.413G>A, NP_071332.2:p.Arg138His

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