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Links from Protein

Items: 1 to 20 of 447

4.

rs1482550396 [Homo sapiens]
    Variant type:
    DEL
    Alleles:
    CTTAT>- [Show Flanks]
    Chromosome:
    1:108949820 (GRCh38)
    1:109492442 (GRCh37)
    Canonical SPDI:
    NC_000001.11:108949819:CTTAT:
    Gene:
    CLCC1 (Varview)
    Functional Consequence:
    stop_gained,intron_variant,non_coding_transcript_variant,coding_sequence_variant,5_prime_UTR_variant
    Clinical significance:
    uncertain-significance
    Validated:
    by frequency
    MAF:
    -=0.000004/1 (GnomAD_exomes)
    HGVS:
    NC_000001.11:g.108949820_108949824del, NC_000001.10:g.109492442_109492446del, NM_015127.5:c.229_233del, NM_015127.4:c.229_233del, NM_001048210.3:c.229_233del, NM_001048210.2:c.229_233del, NM_001278202.2:c.229_233del, NM_001278202.1:c.229_233del, NR_165299.1:n.525_529del, NM_001377470.1:c.-234_-230del, NM_001377459.1:c.229_233del, NM_001377458.1:c.229_233del, NM_001377468.1:c.229_233del, NM_001377465.1:c.229_233del, NM_001377466.1:c.229_233del, NM_001377467.1:c.229_233del, NM_001377460.1:c.229_233del, NM_001377461.1:c.229_233del, NM_001377463.1:c.229_233del, NM_001377462.1:c.229_233del, NM_001377464.1:c.229_233del, NM_001278203.1:c.229_233del, NP_055942.1:p.Tyr76_Lys77insTer, NP_001041675.1:p.Tyr76_Lys77insTer, NP_001265131.1:p.Tyr76_Lys77insTer, NP_001364388.1:p.Tyr76_Lys77insTer, NP_001364387.1:p.Tyr76_Lys77insTer, NP_001364397.1:p.Tyr76_Lys77insTer, NP_001364394.1:p.Tyr76_Lys77insTer, NP_001364395.1:p.Tyr76_Lys77insTer, NP_001364396.1:p.Tyr76_Lys77insTer, NP_001364389.1:p.Tyr76_Lys77insTer, NP_001364390.1:p.Tyr76_Lys77insTer, NP_001364392.1:p.Tyr76_Lys77insTer, NP_001364391.1:p.Tyr76_Lys77insTer, NP_001364393.1:p.Tyr76_Lys77insTer, NP_001265132.1:p.Tyr76_Lys77insTer
    10.

    rs1466927611 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      T>C [Show Flanks]
      Chromosome:
      1:108940096 (GRCh38)
      1:109482718 (GRCh37)
      Canonical SPDI:
      NC_000001.11:108940095:T:C
      Gene:
      CLCC1 (Varview)
      Functional Consequence:
      non_coding_transcript_variant,synonymous_variant,coding_sequence_variant,intron_variant
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      C=0.000071/1 (ALFA)
      C=0.000004/1 (GnomAD_exomes)
      C=0.000011/3 (TOPMED)
      HGVS:
      14.

      rs1457769830 [Homo sapiens]
        Variant type:
        DELINS
        Alleles:
        GCTGCCTTGGT>- [Show Flanks]
        Chromosome:
        1:108934739 (GRCh38)
        1:109477361 (GRCh37)
        Canonical SPDI:
        NC_000001.11:108934736:GTGCTGCCTTGGT:GT
        Gene:
        CLCC1 (Varview), GPSM2 (Varview)
        Functional Consequence:
        downstream_transcript_variant,coding_sequence_variant,frameshift_variant,non_coding_transcript_variant,500B_downstream_variant
        Validated:
        by frequency
        MAF:
        -=0.000004/1 (GnomAD_exomes)
        HGVS:
        NC_000001.11:g.108934739_108934749del, NC_000001.10:g.109477361_109477371del, NG_028108.2:g.64390_64400del, NM_015127.5:c.1429_1439del, NM_015127.4:c.1429_1439del, NM_001048210.3:c.1579_1589del, NM_001048210.2:c.1579_1589del, NM_001278202.2:c.1216_1226del, NM_001278202.1:c.1216_1226del, NR_165299.1:n.2189_2199del, NM_001377470.1:c.1288_1298del, NM_001377459.1:c.1579_1589del, NM_001377458.1:c.1579_1589del, NM_001377468.1:c.1579_1589del, NM_001377465.1:c.1579_1589del, NM_001377466.1:c.1579_1589del, NM_001377467.1:c.1579_1589del, NM_001377460.1:c.1579_1589del, NM_001377461.1:c.1579_1589del, NM_001377463.1:c.1579_1589del, NM_001377462.1:c.1579_1589del, NM_001377464.1:c.1579_1589del, NM_001377469.1:c.1477_1487del, NM_001278203.1:c.1024_1034del, NP_055942.1:p.Gln477fs, NP_001041675.1:p.Gln527fs, NP_001265131.1:p.Gln406fs, NP_001364399.1:p.Gln430fs, NP_001364388.1:p.Gln527fs, NP_001364387.1:p.Gln527fs, NP_001364397.1:p.Gln527fs, NP_001364394.1:p.Gln527fs, NP_001364395.1:p.Gln527fs, NP_001364396.1:p.Gln527fs, NP_001364389.1:p.Gln527fs, NP_001364390.1:p.Gln527fs, NP_001364392.1:p.Gln527fs, NP_001364391.1:p.Gln527fs, NP_001364393.1:p.Gln527fs, NP_001364398.1:p.Gln493fs, NP_001265132.1:p.Gln342fs
        15.

        rs1457028176 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          T>A,C [Show Flanks]
          Chromosome:
          1:108937300 (GRCh38)
          1:109479922 (GRCh37)
          Canonical SPDI:
          NC_000001.11:108937299:T:A,NC_000001.11:108937299:T:C
          Gene:
          CLCC1 (Varview)
          Functional Consequence:
          coding_sequence_variant,missense_variant,non_coding_transcript_variant
          Clinical significance:
          uncertain-significance
          Validated:
          by frequency,by alfa,by cluster
          MAF:
          C=0./0 (ALFA)
          A=0.000014/2 (GnomAD)
          HGVS:
          NC_000001.11:g.108937300T>A, NC_000001.11:g.108937300T>C, NC_000001.10:g.109479922T>A, NC_000001.10:g.109479922T>C, NM_015127.5:c.1010A>T, NM_015127.5:c.1010A>G, NM_015127.4:c.1010A>T, NM_015127.4:c.1010A>G, NM_001048210.3:c.1160A>T, NM_001048210.3:c.1160A>G, NM_001048210.2:c.1160A>T, NM_001048210.2:c.1160A>G, NM_001278202.2:c.797A>T, NM_001278202.2:c.797A>G, NM_001278202.1:c.797A>T, NM_001278202.1:c.797A>G, NR_165299.1:n.1770A>T, NR_165299.1:n.1770A>G, NM_001377470.1:c.869A>T, NM_001377470.1:c.869A>G, NM_001377459.1:c.1160A>T, NM_001377459.1:c.1160A>G, NM_001377458.1:c.1160A>T, NM_001377458.1:c.1160A>G, NM_001377468.1:c.1160A>T, NM_001377468.1:c.1160A>G, NM_001377465.1:c.1160A>T, NM_001377465.1:c.1160A>G, NM_001377466.1:c.1160A>T, NM_001377466.1:c.1160A>G, NM_001377467.1:c.1160A>T, NM_001377467.1:c.1160A>G, NM_001377460.1:c.1160A>T, NM_001377460.1:c.1160A>G, NM_001377461.1:c.1160A>T, NM_001377461.1:c.1160A>G, NM_001377463.1:c.1160A>T, NM_001377463.1:c.1160A>G, NM_001377462.1:c.1160A>T, NM_001377462.1:c.1160A>G, NM_001377464.1:c.1160A>T, NM_001377464.1:c.1160A>G, NM_001377469.1:c.1058A>T, NM_001377469.1:c.1058A>G, NM_001278203.1:c.605A>T, NM_001278203.1:c.605A>G, NP_055942.1:p.Tyr337Phe, NP_055942.1:p.Tyr337Cys, NP_001041675.1:p.Tyr387Phe, NP_001041675.1:p.Tyr387Cys, NP_001265131.1:p.Tyr266Phe, NP_001265131.1:p.Tyr266Cys, NP_001364399.1:p.Tyr290Phe, NP_001364399.1:p.Tyr290Cys, NP_001364388.1:p.Tyr387Phe, NP_001364388.1:p.Tyr387Cys, NP_001364387.1:p.Tyr387Phe, NP_001364387.1:p.Tyr387Cys, NP_001364397.1:p.Tyr387Phe, NP_001364397.1:p.Tyr387Cys, NP_001364394.1:p.Tyr387Phe, NP_001364394.1:p.Tyr387Cys, NP_001364395.1:p.Tyr387Phe, NP_001364395.1:p.Tyr387Cys, NP_001364396.1:p.Tyr387Phe, NP_001364396.1:p.Tyr387Cys, NP_001364389.1:p.Tyr387Phe, NP_001364389.1:p.Tyr387Cys, NP_001364390.1:p.Tyr387Phe, NP_001364390.1:p.Tyr387Cys, NP_001364392.1:p.Tyr387Phe, NP_001364392.1:p.Tyr387Cys, NP_001364391.1:p.Tyr387Phe, NP_001364391.1:p.Tyr387Cys, NP_001364393.1:p.Tyr387Phe, NP_001364393.1:p.Tyr387Cys, NP_001364398.1:p.Tyr353Phe, NP_001364398.1:p.Tyr353Cys, NP_001265132.1:p.Tyr202Phe, NP_001265132.1:p.Tyr202Cys
          16.

          rs1456673755 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            G>C [Show Flanks]
            Chromosome:
            1:108940120 (GRCh38)
            1:109482742 (GRCh37)
            Canonical SPDI:
            NC_000001.11:108940119:G:C
            Gene:
            CLCC1 (Varview)
            Functional Consequence:
            coding_sequence_variant,intron_variant,non_coding_transcript_variant,synonymous_variant
            Clinical significance:
            likely-benign
            Validated:
            by frequency,by alfa,by cluster
            MAF:
            C=0.000028/1 (ALFA)
            C=0.000004/1 (GnomAD_exomes)
            C=0.000007/1 (GnomAD)
            C=0.000019/5 (TOPMED)
            HGVS:
            17.
            18.

            rs1452276085 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              T>G [Show Flanks]
              Chromosome:
              1:108934911 (GRCh38)
              1:109477533 (GRCh37)
              Canonical SPDI:
              NC_000001.11:108934910:T:G
              Gene:
              CLCC1 (Varview), GPSM2 (Varview)
              Functional Consequence:
              downstream_transcript_variant,coding_sequence_variant,non_coding_transcript_variant,500B_downstream_variant,missense_variant
              Validated:
              by frequency
              MAF:
              G=0.000004/1 (GnomAD_exomes)
              HGVS:
              NC_000001.11:g.108934911T>G, NC_000001.10:g.109477533T>G, NG_028108.2:g.64562T>G, NM_015127.5:c.1265A>C, NM_015127.4:c.1265A>C, NM_001048210.3:c.1415A>C, NM_001048210.2:c.1415A>C, NM_001278202.2:c.1052A>C, NM_001278202.1:c.1052A>C, NR_165299.1:n.2025A>C, NM_001377470.1:c.1124A>C, NM_001377459.1:c.1415A>C, NM_001377458.1:c.1415A>C, NM_001377468.1:c.1415A>C, NM_001377465.1:c.1415A>C, NM_001377466.1:c.1415A>C, NM_001377467.1:c.1415A>C, NM_001377460.1:c.1415A>C, NM_001377461.1:c.1415A>C, NM_001377463.1:c.1415A>C, NM_001377462.1:c.1415A>C, NM_001377464.1:c.1415A>C, NM_001377469.1:c.1313A>C, NM_001278203.1:c.860A>C, NP_055942.1:p.Lys422Thr, NP_001041675.1:p.Lys472Thr, NP_001265131.1:p.Lys351Thr, NP_001364399.1:p.Lys375Thr, NP_001364388.1:p.Lys472Thr, NP_001364387.1:p.Lys472Thr, NP_001364397.1:p.Lys472Thr, NP_001364394.1:p.Lys472Thr, NP_001364395.1:p.Lys472Thr, NP_001364396.1:p.Lys472Thr, NP_001364389.1:p.Lys472Thr, NP_001364390.1:p.Lys472Thr, NP_001364392.1:p.Lys472Thr, NP_001364391.1:p.Lys472Thr, NP_001364393.1:p.Lys472Thr, NP_001364398.1:p.Lys438Thr, NP_001265132.1:p.Lys287Thr
              19.

              rs1450769275 [Homo sapiens]
                Variant type:
                DELINS
                Alleles:
                ATGAACTGATTTTCCAGCAC>- [Show Flanks]
                Chromosome:
                1:108937386 (GRCh38)
                1:109480008 (GRCh37)
                Canonical SPDI:
                NC_000001.11:108937379:CAGCACATGAACTGATTTTCCAGCAC:CAGCAC
                Gene:
                CLCC1 (Varview)
                Functional Consequence:
                non_coding_transcript_variant,coding_sequence_variant,frameshift_variant
                Validated:
                by frequency,by alfa
                MAF:
                CAGCAC=0./0 (ALFA)
                -=0.000004/1 (TOPMED)
                HGVS:
                NC_000001.11:g.108937386_108937405del, NC_000001.10:g.109480008_109480027del, NM_015127.5:c.911_930del, NM_015127.4:c.911_930del, NM_001048210.3:c.1061_1080del, NM_001048210.2:c.1061_1080del, NM_001278202.2:c.698_717del, NM_001278202.1:c.698_717del, NR_165299.1:n.1671_1690del, NM_001377470.1:c.770_789del, NM_001377459.1:c.1061_1080del, NM_001377458.1:c.1061_1080del, NM_001377468.1:c.1061_1080del, NM_001377465.1:c.1061_1080del, NM_001377466.1:c.1061_1080del, NM_001377467.1:c.1061_1080del, NM_001377460.1:c.1061_1080del, NM_001377461.1:c.1061_1080del, NM_001377463.1:c.1061_1080del, NM_001377462.1:c.1061_1080del, NM_001377464.1:c.1061_1080del, NM_001377469.1:c.959_978del, NM_001278203.1:c.506_525del, NP_055942.1:p.Gly304fs, NP_001041675.1:p.Gly354fs, NP_001265131.1:p.Gly233fs, NP_001364399.1:p.Gly257fs, NP_001364388.1:p.Gly354fs, NP_001364387.1:p.Gly354fs, NP_001364397.1:p.Gly354fs, NP_001364394.1:p.Gly354fs, NP_001364395.1:p.Gly354fs, NP_001364396.1:p.Gly354fs, NP_001364389.1:p.Gly354fs, NP_001364390.1:p.Gly354fs, NP_001364392.1:p.Gly354fs, NP_001364391.1:p.Gly354fs, NP_001364393.1:p.Gly354fs, NP_001364398.1:p.Gly320fs, NP_001265132.1:p.Gly169fs

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