SNP Links for Protein (Select 13194201) - SNP

Links from Protein

Items: 1 to 20 of 521

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Select item 14891362741.

rs1489136274 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 22:20242649 (GRCh38)
22:20230172 (GRCh37)
Canonical SPDI:: NC_000022.11:20242648:G:A,NC_000022.11:20242648:G:C
Gene:: RTN4R (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,stop_gained
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000022.11:g.20242649G>A, NC_000022.11:g.20242649G>C, NC_000022.10:g.20230172G>A, NC_000022.10:g.20230172G>C, NG_012176.2:g.30645C>T, NG_012176.2:g.30645C>G, NM_023004.6:c.484C>T, NM_023004.6:c.484C>G, NM_023004.5:c.484C>T, NM_023004.5:c.484C>G, NP_075380.1:p.Gln162Ter, NP_075380.1:p.Gln162Glu

Select item 14839614242.

rs1483961424 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:20242332 (GRCh38)
22:20229855 (GRCh37)
Canonical SPDI:: NC_000022.11:20242331:C:T
Gene:: RTN4R (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000022.11:g.20242332C>T, NC_000022.10:g.20229855C>T, NG_012176.2:g.30962G>A, NM_023004.6:c.801G>A, NM_023004.5:c.801G>A

Select item 14836090193.

rs1483609019 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 22:20241977 (GRCh38)
22:20229500 (GRCh37)
Canonical SPDI:: NC_000022.11:20241976:T:C
Gene:: RTN4R (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: C=0.000111/1 (ALFA)
C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000022.11:g.20241977T>C, NC_000022.10:g.20229500T>C, NG_012176.2:g.31317A>G, NM_023004.6:c.1156A>G, NM_023004.5:c.1156A>G, NP_075380.1:p.Thr386Ala

Select item 14784318744.

rs1478431874 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 22:20242290 (GRCh38)
22:20229813 (GRCh37)
Canonical SPDI:: NC_000022.11:20242289:G:A
Gene:: RTN4R (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000066/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000005/1 (GnomAD_exomes)
A=0.000223/1 (Estonian)
HGVS:: NC_000022.11:g.20242290G>A, NC_000022.10:g.20229813G>A, NG_012176.2:g.31004C>T, NM_023004.6:c.843C>T, NM_023004.5:c.843C>T

Select item 14783731745.

rs1478373174 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 22:20241760 (GRCh38)
22:20229283 (GRCh37)
Canonical SPDI:: NC_000022.11:20241759:G:C,NC_000022.11:20241759:G:T
Gene:: RTN4R (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000022.11:g.20241760G>C, NC_000022.11:g.20241760G>T, NC_000022.10:g.20229283G>C, NC_000022.10:g.20229283G>T, NG_012176.2:g.31534C>G, NG_012176.2:g.31534C>A, NM_023004.6:c.1373C>G, NM_023004.6:c.1373C>A, NM_023004.5:c.1373C>G, NM_023004.5:c.1373C>A, NP_075380.1:p.Thr458Ser, NP_075380.1:p.Thr458Asn

Select item 14745685436.

rs1474568543 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 22:20243091 (GRCh38)
22:20230614 (GRCh37)
Canonical SPDI:: NC_000022.11:20243090:C:G
Gene:: RTN4R (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by cluster
MAF:: G=0.00004/1 (TOMMO)
HGVS:: NC_000022.11:g.20243091C>G, NC_000022.10:g.20230614C>G, NG_012176.2:g.30203G>C, NM_023004.6:c.42G>C, NM_023004.5:c.42G>C, NP_075380.1:p.Trp14Cys

Select item 14735357237.

rs1473535723 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:20242746 (GRCh38)
22:20230269 (GRCh37)
Canonical SPDI:: NC_000022.11:20242745:C:T
Gene:: RTN4R (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000022.11:g.20242746C>T, NC_000022.10:g.20230269C>T, NG_012176.2:g.30548G>A, NM_023004.6:c.387G>A, NM_023004.5:c.387G>A

Select item 14735183568.

rs1473518356 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 22:20242188 (GRCh38)
22:20229711 (GRCh37)
Canonical SPDI:: NC_000022.11:20242187:A:G
Gene:: RTN4R (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000022.11:g.20242188A>G, NC_000022.10:g.20229711A>G, NG_012176.2:g.31106T>C, NM_023004.6:c.945T>C, NM_023004.5:c.945T>C

Select item 14726113459.

rs1472611345 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:20242506 (GRCh38)
22:20230029 (GRCh37)
Canonical SPDI:: NC_000022.11:20242505:C:T
Gene:: RTN4R (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by cluster
MAF:: T=0.000004/1 (GnomAD_exomes)
T=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.20242506C>T, NC_000022.10:g.20230029C>T, NG_012176.2:g.30788G>A, NM_023004.6:c.627G>A, NM_023004.5:c.627G>A

Select item 146683926710.

rs1466839267 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 22:20242664 (GRCh38)
22:20230187 (GRCh37)
Canonical SPDI:: NC_000022.11:20242663:G:T
Gene:: RTN4R (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000054/1 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
T=0.000223/1 (Estonian)
HGVS:: NC_000022.11:g.20242664G>T, NC_000022.10:g.20230187G>T, NG_012176.2:g.30630C>A, NM_023004.6:c.469C>A, NM_023004.5:c.469C>A, NP_075380.1:p.Gln157Lys

Select item 146640516611.

rs1466405166 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 22:20242335 (GRCh38)
22:20229858 (GRCh37)
Canonical SPDI:: NC_000022.11:20242334:G:A
Gene:: RTN4R (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
HGVS:: NC_000022.11:g.20242335G>A, NC_000022.10:g.20229858G>A, NG_012176.2:g.30959C>T, NM_023004.6:c.798C>T, NM_023004.5:c.798C>T

Select item 146435553812.

rs1464355538 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 22:20242577 (GRCh38)
22:20230100 (GRCh37)
Canonical SPDI:: NC_000022.11:20242576:G:A
Gene:: RTN4R (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000022.11:g.20242577G>A, NC_000022.10:g.20230100G>A, NG_012176.2:g.30717C>T, NM_023004.6:c.556C>T, NM_023004.5:c.556C>T, NP_075380.1:p.His186Tyr

Select item 146365407313.

rs1463654073 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:20241921 (GRCh38)
22:20229444 (GRCh37)
Canonical SPDI:: NC_000022.11:20241920:C:T
Gene:: RTN4R (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by cluster
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000022.11:g.20241921C>T, NC_000022.10:g.20229444C>T, NG_012176.2:g.31373G>A, NM_023004.6:c.1212G>A, NM_023004.5:c.1212G>A

Select item 146139009414.

rs1461390094 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 22:20242606 (GRCh38)
22:20230129 (GRCh37)
Canonical SPDI:: NC_000022.11:20242605:T:C
Gene:: RTN4R (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000022.11:g.20242606T>C, NC_000022.10:g.20230129T>C, NG_012176.2:g.30688A>G, NM_023004.6:c.527A>G, NM_023004.5:c.527A>G, NP_075380.1:p.Asp176Gly

Select item 145946474315.

rs1459464743 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:20242686 (GRCh38)
22:20230209 (GRCh37)
Canonical SPDI:: NC_000022.11:20242685:C:T
Gene:: RTN4R (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000022.11:g.20242686C>T, NC_000022.10:g.20230209C>T, NG_012176.2:g.30608G>A, NM_023004.6:c.447G>A, NM_023004.5:c.447G>A

Select item 145792745416.

rs1457927454 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 22:20242569 (GRCh38)
22:20230092 (GRCh37)
Canonical SPDI:: NC_000022.11:20242568:G:A
Gene:: RTN4R (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000022.11:g.20242569G>A, NC_000022.10:g.20230092G>A, NG_012176.2:g.30725C>T, NM_023004.6:c.564C>T, NM_023004.5:c.564C>T

Select item 145732505117.

rs1457325051 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 22:20242446 (GRCh38)
22:20229969 (GRCh37)
Canonical SPDI:: NC_000022.11:20242445:C:G
Gene:: RTN4R (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000022.11:g.20242446C>G, NC_000022.10:g.20229969C>G, NG_012176.2:g.30848G>C, NM_023004.6:c.687G>C, NM_023004.5:c.687G>C, NP_075380.1:p.Met229Ile

Select item 145343128718.

rs1453431287 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 22:20242760 (GRCh38)
22:20230283 (GRCh37)
Canonical SPDI:: NC_000022.11:20242759:T:C
Gene:: RTN4R (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000022.11:g.20242760T>C, NC_000022.10:g.20230283T>C, NG_012176.2:g.30534A>G, NM_023004.6:c.373A>G, NM_023004.5:c.373A>G, NP_075380.1:p.Thr125Ala

Select item 145229551019.

rs1452295510 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 22:20242590 (GRCh38)
22:20230113 (GRCh37)
Canonical SPDI:: NC_000022.11:20242589:T:C,NC_000022.11:20242589:T:G
Gene:: RTN4R (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by cluster
MAF:: G=0.000004/1 (GnomAD_exomes)
C=0.000035/1 (TOMMO)
C=0.000343/1 (KOREAN)
HGVS:: NC_000022.11:g.20242590T>C, NC_000022.11:g.20242590T>G, NC_000022.10:g.20230113T>C, NC_000022.10:g.20230113T>G, NG_012176.2:g.30704A>G, NG_012176.2:g.30704A>C, NM_023004.6:c.543A>G, NM_023004.6:c.543A>C, NM_023004.5:c.543A>G, NM_023004.5:c.543A>C

Select item 145218506620.

rs1452185066 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:20242331 (GRCh38)
22:20229854 (GRCh37)
Canonical SPDI:: NC_000022.11:20242330:C:T
Gene:: RTN4R (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
HGVS:: NC_000022.11:g.20242331C>T, NC_000022.10:g.20229854C>T, NG_012176.2:g.30963G>A, NM_023004.6:c.802G>A, NM_023004.5:c.802G>A, NP_075380.1:p.Ala268Thr

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