SNP Links for Protein (Select 13236497) - SNP

Warning: The NCBI web site requires JavaScript to function. more...

Links from Protein

Items: 1 to 20 of 431

<< First< Prev

Page of 22

Next >Last >>

Select item 14889013821.

rs1488901382 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 7:155070904 (GRCh38)
7:154862614 (GRCh37)
Canonical SPDI:: NC_000007.14:155070903:A:G
Gene:: HTR5A (Varview), HTR5A-AS1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.155070904A>G, NC_000007.13:g.154862614A>G, NG_044997.1:g.5581A>G, NM_024012.4:c.5A>G, NM_024012.3:c.5A>G, NP_076917.1:p.Asp2Gly

Select item 14875210172.

rs1487521017 [Homo sapiens]

Variant type:: DELINS
Alleles:: GCCAC>- [Show Flanks]
Chromosome:: 7:155084203 (GRCh38)
7:154875913 (GRCh37)
Canonical SPDI:: NC_000007.14:155084196:CGCCACGCCAC:CGCCAC
Gene:: HTR5A (Varview)
Functional Consequence:: frameshift_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CGCCAC=0./0 (ALFA)
-=0.000004/1 (GnomAD_exomes)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.155084198GCCAC[1], NC_000007.13:g.154875908GCCAC[1], NG_044997.1:g.18875GCCAC[1], NM_024012.4:c.790_794del, NM_024012.3:c.790_794del, NP_076917.1:p.Ala264fs

Select item 14864001863.

rs1486400186 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:155084432 (GRCh38)
7:154876142 (GRCh37)
Canonical SPDI:: NC_000007.14:155084431:C:T
Gene:: HTR5A (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000007.14:g.155084432C>T, NC_000007.13:g.154876142C>T, NG_044997.1:g.19109C>T, NM_024012.4:c.1019C>T, NM_024012.3:c.1019C>T, NP_076917.1:p.Ala340Val

Select item 14862034724.

rs1486203472 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 7:155071438 (GRCh38)
7:154863148 (GRCh37)
Canonical SPDI:: NC_000007.14:155071437:G:T
Gene:: HTR5A (Varview), HTR5A-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000007.14:g.155071438G>T, NC_000007.13:g.154863148G>T, NG_044997.1:g.6115G>T, NM_024012.4:c.539G>T, NM_024012.3:c.539G>T, NR_038945.1:n.120C>A, NP_076917.1:p.Gly180Val

Select item 14853046095.

rs1485304609 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:155071164 (GRCh38)
7:154862874 (GRCh37)
Canonical SPDI:: NC_000007.14:155071163:G:A
Gene:: HTR5A (Varview), HTR5A-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,missense_variant,coding_sequence_variant
HGVS:: NC_000007.14:g.155071164G>A, NC_000007.13:g.154862874G>A, NG_044997.1:g.5841G>A, NM_024012.4:c.265G>A, NM_024012.3:c.265G>A, NR_038945.1:n.394C>T, NP_076917.1:p.Val89Met

Select item 14852366026.

rs1485236602 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 7:155071561 (GRCh38)
7:154863271 (GRCh37)
Canonical SPDI:: NC_000007.14:155071560:G:T
Gene:: HTR5A (Varview), HTR5A-AS1 (Varview)
Functional Consequence:: missense_variant,2KB_upstream_variant,coding_sequence_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000043/1 (ALFA)
T=0.000008/2 (GnomAD_exomes)
T=0.00003/8 (TOPMED)
T=0.000036/5 (GnomAD)
HGVS:: NC_000007.14:g.155071561G>T, NC_000007.13:g.154863271G>T, NG_044997.1:g.6238G>T, NM_024012.4:c.662G>T, NM_024012.3:c.662G>T, NP_076917.1:p.Trp221Leu

Select item 14834315347.

rs1483431534 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:155071085 (GRCh38)
7:154862795 (GRCh37)
Canonical SPDI:: NC_000007.14:155071084:G:A
Gene:: HTR5A (Varview), HTR5A-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000007.14:g.155071085G>A, NC_000007.13:g.154862795G>A, NG_044997.1:g.5762G>A, NM_024012.4:c.186G>A, NM_024012.3:c.186G>A, NR_038945.1:n.473C>T

Select item 14776684808.

rs1477668480 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 7:155084237 (GRCh38)
7:154875947 (GRCh37)
Canonical SPDI:: NC_000007.14:155084236:G:T
Gene:: HTR5A (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.155084237G>T, NC_000007.13:g.154875947G>T, NG_044997.1:g.18914G>T, NM_024012.4:c.824G>T, NM_024012.3:c.824G>T, NP_076917.1:p.Trp275Leu

Select item 14682082989.

rs1468208298 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 7:155071338 (GRCh38)
7:154863048 (GRCh37)
Canonical SPDI:: NC_000007.14:155071337:A:G
Gene:: HTR5A (Varview), HTR5A-AS1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000007.14:g.155071338A>G, NC_000007.13:g.154863048A>G, NG_044997.1:g.6015A>G, NM_024012.4:c.439A>G, NM_024012.3:c.439A>G, NR_038945.1:n.220T>C, NP_076917.1:p.Met147Val

Select item 146533665910.

rs1465336659 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:155070984 (GRCh38)
7:154862694 (GRCh37)
Canonical SPDI:: NC_000007.14:155070983:C:T
Gene:: HTR5A (Varview), HTR5A-AS1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: T=0.0003/1 (KOREAN)
HGVS:: NC_000007.14:g.155070984C>T, NC_000007.13:g.154862694C>T, NG_044997.1:g.5661C>T, NM_024012.4:c.85C>T, NM_024012.3:c.85C>T

Select item 146440512311.

rs1464405123 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 7:155070917 (GRCh38)
7:154862627 (GRCh37)
Canonical SPDI:: NC_000007.14:155070916:C:A
Gene:: HTR5A (Varview), HTR5A-AS1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,intron_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000007.14:g.155070917C>A, NC_000007.13:g.154862627C>A, NG_044997.1:g.5594C>A, NM_024012.4:c.18C>A, NM_024012.3:c.18C>A, NP_076917.1:p.Asn6Lys

Select item 146135239512.

rs1461352395 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:155071426 (GRCh38)
7:154863136 (GRCh37)
Canonical SPDI:: NC_000007.14:155071425:C:T
Gene:: HTR5A (Varview), HTR5A-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: T=0.000012/3 (GnomAD_exomes)
HGVS:: NC_000007.14:g.155071426C>T, NC_000007.13:g.154863136C>T, NG_044997.1:g.6103C>T, NM_024012.4:c.527C>T, NM_024012.3:c.527C>T, NR_038945.1:n.132G>A, NP_076917.1:p.Pro176Leu

Select item 145568450013.

rs1455684500 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 7:155071606 (GRCh38)
7:154863316 (GRCh37)
Canonical SPDI:: NC_000007.14:155071605:C:A
Gene:: HTR5A (Varview), HTR5A-AS1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000007.14:g.155071606C>A, NC_000007.13:g.154863316C>A, NG_044997.1:g.6283C>A, NM_024012.4:c.707C>A, NM_024012.3:c.707C>A, NP_076917.1:p.Thr236Asn

Select item 145443500714.

rs1454435007 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 7:155071515 (GRCh38)
7:154863225 (GRCh37)
Canonical SPDI:: NC_000007.14:155071514:G:A,NC_000007.14:155071514:G:T
Gene:: HTR5A (Varview), HTR5A-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000007.14:g.155071515G>A, NC_000007.14:g.155071515G>T, NC_000007.13:g.154863225G>A, NC_000007.13:g.154863225G>T, NG_044997.1:g.6192G>A, NG_044997.1:g.6192G>T, NM_024012.4:c.616G>A, NM_024012.4:c.616G>T, NM_024012.3:c.616G>A, NM_024012.3:c.616G>T, NR_038945.1:n.43C>T, NR_038945.1:n.43C>A, NP_076917.1:p.Val206Ile, NP_076917.1:p.Val206Leu

Select item 145240390515.

rs1452403905 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 7:155071585 (GRCh38)
7:154863295 (GRCh37)
Canonical SPDI:: NC_000007.14:155071584:T:C
Gene:: HTR5A (Varview), HTR5A-AS1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000007.14:g.155071585T>C, NC_000007.13:g.154863295T>C, NG_044997.1:g.6262T>C, NM_024012.4:c.686T>C, NM_024012.3:c.686T>C, NP_076917.1:p.Phe229Ser

Select item 145167983916.

rs1451679839 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 7:155071135 (GRCh38)
7:154862845 (GRCh37)
Canonical SPDI:: NC_000007.14:155071134:T:C
Gene:: HTR5A (Varview), HTR5A-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000007.14:g.155071135T>C, NC_000007.13:g.154862845T>C, NG_044997.1:g.5812T>C, NM_024012.4:c.236T>C, NM_024012.3:c.236T>C, NR_038945.1:n.423A>G, NP_076917.1:p.Val79Ala

Select item 145135994617.

rs1451359946 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 7:155084303 (GRCh38)
7:154876013 (GRCh37)
Canonical SPDI:: NC_000007.14:155084302:G:C,NC_000007.14:155084302:G:T
Gene:: HTR5A (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000028/1 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000036/5 (GnomAD)
HGVS:: NC_000007.14:g.155084303G>C, NC_000007.14:g.155084303G>T, NC_000007.13:g.154876013G>C, NC_000007.13:g.154876013G>T, NG_044997.1:g.18980G>C, NG_044997.1:g.18980G>T, NM_024012.4:c.890G>C, NM_024012.4:c.890G>T, NM_024012.3:c.890G>C, NM_024012.3:c.890G>T, NP_076917.1:p.Cys297Ser, NP_076917.1:p.Cys297Phe

Select item 144917754718.

rs1449177547 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 7:155071116 (GRCh38)
7:154862826 (GRCh37)
Canonical SPDI:: NC_000007.14:155071115:C:A
Gene:: HTR5A (Varview), HTR5A-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: A=0.000111/1 (ALFA)
A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000007.14:g.155071116C>A, NC_000007.13:g.154862826C>A, NG_044997.1:g.5793C>A, NM_024012.4:c.217C>A, NM_024012.3:c.217C>A, NR_038945.1:n.442G>T, NP_076917.1:p.Arg73Ser

Select item 144886640419.

rs1448866404 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:155071207 (GRCh38)
7:154862917 (GRCh37)
Canonical SPDI:: NC_000007.14:155071206:C:T
Gene:: HTR5A (Varview), HTR5A-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000007.14:g.155071207C>T, NC_000007.13:g.154862917C>T, NG_044997.1:g.5884C>T, NM_024012.4:c.308C>T, NM_024012.3:c.308C>T, NR_038945.1:n.351G>A, NP_076917.1:p.Ser103Phe

Select item 144267300020.

rs1442673000 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 7:155071249 (GRCh38)
7:154862959 (GRCh37)
Canonical SPDI:: NC_000007.14:155071248:G:T
Gene:: HTR5A (Varview), HTR5A-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000051/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000007.14:g.155071249G>T, NC_000007.13:g.154862959G>T, NG_044997.1:g.5926G>T, NM_024012.4:c.350G>T, NM_024012.3:c.350G>T, NR_038945.1:n.309C>A, NP_076917.1:p.Trp117Leu

<< First< Prev

Page of 22

Next >Last >>

Supplemental Content

Filters: Manage Filters

Find related data

Recent activity

Clear Turn Off Turn On

SNP Links for Protein (Select 13236497) (431)
SNP

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

dbSNP

Result Filters

Clinical Significance

Validation Status

Publication

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to: