SNP Links for Protein (Select 14043042) - SNP

Links from Protein

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Select item 14859815011.

rs1485981501 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:45901682 (GRCh38)
3:45943174 (GRCh37)
Canonical SPDI:: NC_000003.12:45901681:C:T
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,synonymous_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.45901682C>T, NC_000003.11:g.45943174C>T, NG_033917.1:g.19043G>A, NG_029472.1:g.20179C>T, NM_006641.4:c.858C>T, NM_006641.3:c.858C>T, NM_031200.3:c.894C>T, NM_031200.2:c.894C>T, NM_001256369.2:c.858C>T, NM_001256369.1:c.858C>T, NM_001386447.1:c.894C>T, NM_001386448.1:c.894C>T, NR_036525.1:n.1160C>T

Select item 14858549132.

rs1485854913 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 3:45901250 (GRCh38)
3:45942742 (GRCh37)
Canonical SPDI:: NC_000003.12:45901249:A:C
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,synonymous_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000003.12:g.45901250A>C, NC_000003.11:g.45942742A>C, NG_033917.1:g.19475T>G, NG_029472.1:g.19747A>C, NM_006641.4:c.426A>C, NM_006641.3:c.426A>C, NM_031200.3:c.462A>C, NM_031200.2:c.462A>C, NM_001256369.2:c.426A>C, NM_001256369.1:c.426A>C, NM_001386447.1:c.462A>C, NM_001386448.1:c.462A>C, NR_036525.1:n.728A>C

Select item 14856161533.

rs1485616153 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:45901747 (GRCh38)
3:45943239 (GRCh37)
Canonical SPDI:: NC_000003.12:45901746:T:C
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000003.12:g.45901747T>C, NC_000003.11:g.45943239T>C, NG_033917.1:g.18978A>G, NG_029472.1:g.20244T>C, NM_006641.4:c.923T>C, NM_006641.3:c.923T>C, NM_031200.3:c.959T>C, NM_031200.2:c.959T>C, NM_001256369.2:c.923T>C, NM_001256369.1:c.923T>C, NM_001386447.1:c.959T>C, NM_001386448.1:c.959T>C, NR_036525.1:n.1225T>C, NP_006632.2:p.Val308Ala, NP_112477.1:p.Val320Ala, NP_001243298.1:p.Val308Ala, NP_001373376.1:p.Val320Ala, NP_001373377.1:p.Val320Ala

Select item 14817917474.

rs1481791747 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 3:45901656 (GRCh38)
3:45943148 (GRCh37)
Canonical SPDI:: NC_000003.12:45901655:G:C
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000003.12:g.45901656G>C, NC_000003.11:g.45943148G>C, NG_033917.1:g.19069C>G, NG_029472.1:g.20153G>C, NM_006641.4:c.832G>C, NM_006641.3:c.832G>C, NM_031200.3:c.868G>C, NM_031200.2:c.868G>C, NM_001256369.2:c.832G>C, NM_001256369.1:c.832G>C, NM_001386447.1:c.868G>C, NM_001386448.1:c.868G>C, NR_036525.1:n.1134G>C, NP_006632.2:p.Ala278Pro, NP_112477.1:p.Ala290Pro, NP_001243298.1:p.Ala278Pro, NP_001373376.1:p.Ala290Pro, NP_001373377.1:p.Ala290Pro

Select item 14761332045.

rs1476133204 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:45901157 (GRCh38)
3:45942649 (GRCh37)
Canonical SPDI:: NC_000003.12:45901156:C:T
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.45901157C>T, NC_000003.11:g.45942649C>T, NG_033917.1:g.19568G>A, NG_029472.1:g.19654C>T, NM_006641.4:c.333C>T, NM_006641.3:c.333C>T, NM_031200.3:c.369C>T, NM_031200.2:c.369C>T, NM_001256369.2:c.333C>T, NM_001256369.1:c.333C>T, NM_001386447.1:c.369C>T, NM_001386448.1:c.369C>T, NR_036525.1:n.635C>T

Select item 14759485926.

rs1475948592 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 3:45901762 (GRCh38)
3:45943254 (GRCh37)
Canonical SPDI:: NC_000003.12:45901761:G:A,NC_000003.12:45901761:G:T
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000008/2 (GnomAD_exomes)
A=0.000021/3 (GnomAD)
A=0.000546/1 (Korea1K)
HGVS:: NC_000003.12:g.45901762G>A, NC_000003.12:g.45901762G>T, NC_000003.11:g.45943254G>A, NC_000003.11:g.45943254G>T, NG_033917.1:g.18963C>T, NG_033917.1:g.18963C>A, NG_029472.1:g.20259G>A, NG_029472.1:g.20259G>T, NM_006641.4:c.938G>A, NM_006641.4:c.938G>T, NM_006641.3:c.938G>A, NM_006641.3:c.938G>T, NM_031200.3:c.974G>A, NM_031200.3:c.974G>T, NM_031200.2:c.974G>A, NM_031200.2:c.974G>T, NM_001256369.2:c.938G>A, NM_001256369.2:c.938G>T, NM_001256369.1:c.938G>A, NM_001256369.1:c.938G>T, NM_001386447.1:c.974G>A, NM_001386447.1:c.974G>T, NM_001386448.1:c.974G>A, NM_001386448.1:c.974G>T, NR_036525.1:n.1240G>A, NR_036525.1:n.1240G>T, NP_006632.2:p.Arg313His, NP_006632.2:p.Arg313Leu, NP_112477.1:p.Arg325His, NP_112477.1:p.Arg325Leu, NP_001243298.1:p.Arg313His, NP_001243298.1:p.Arg313Leu, NP_001373376.1:p.Arg325His, NP_001373376.1:p.Arg325Leu, NP_001373377.1:p.Arg325His, NP_001373377.1:p.Arg325Leu

Select item 14686252247.

rs1468625224 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 3:45901475 (GRCh38)
3:45942967 (GRCh37)
Canonical SPDI:: NC_000003.12:45901474:C:A,NC_000003.12:45901474:C:T
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.45901475C>A, NC_000003.12:g.45901475C>T, NC_000003.11:g.45942967C>A, NC_000003.11:g.45942967C>T, NG_033917.1:g.19250G>T, NG_033917.1:g.19250G>A, NG_029472.1:g.19972C>A, NG_029472.1:g.19972C>T, NM_006641.4:c.651C>A, NM_006641.4:c.651C>T, NM_006641.3:c.651C>A, NM_006641.3:c.651C>T, NM_031200.3:c.687C>A, NM_031200.3:c.687C>T, NM_031200.2:c.687C>A, NM_031200.2:c.687C>T, NM_001256369.2:c.651C>A, NM_001256369.2:c.651C>T, NM_001256369.1:c.651C>A, NM_001256369.1:c.651C>T, NM_001386447.1:c.687C>A, NM_001386447.1:c.687C>T, NM_001386448.1:c.687C>A, NM_001386448.1:c.687C>T, NR_036525.1:n.953C>A, NR_036525.1:n.953C>T

Select item 14684561328.

rs1468456132 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:45900939 (GRCh38)
3:45942431 (GRCh37)
Canonical SPDI:: NC_000003.12:45900938:C:T
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by cluster
MAF:: T=0.00011/2 (TOMMO)
HGVS:: NC_000003.12:g.45900939C>T, NC_000003.11:g.45942431C>T, NG_033917.1:g.19786G>A, NG_029472.1:g.19436C>T, NM_006641.4:c.115C>T, NM_006641.3:c.115C>T, NM_031200.3:c.151C>T, NM_031200.2:c.151C>T, NM_001256369.2:c.115C>T, NM_001256369.1:c.115C>T, NM_001386447.1:c.151C>T, NM_001386448.1:c.151C>T, NR_036525.1:n.417C>T, NP_006632.2:p.Leu39Phe, NP_112477.1:p.Leu51Phe, NP_001243298.1:p.Leu39Phe, NP_001373376.1:p.Leu51Phe, NP_001373377.1:p.Leu51Phe

Select item 14630062679.

rs1463006267 [Homo sapiens]

Variant type:: DELINS
Alleles:: CTC>- [Show Flanks]
Chromosome:: 3:45901074 (GRCh38)
3:45942566 (GRCh37)
Canonical SPDI:: NC_000003.12:45901069:CCTCCTC:CCTC
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,inframe_deletion,coding_sequence_variant
Validated:: by frequency
MAF:: -=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000003.12:g.45901071CTC[1], NC_000003.11:g.45942563CTC[1], NG_033917.1:g.19650AGG[1], NG_029472.1:g.19568CTC[1], NM_006641.4:c.247CTC[1], NM_006641.3:c.247CTC[1], NM_031200.3:c.283CTC[1], NM_031200.2:c.283CTC[1], NM_001256369.2:c.247CTC[1], NM_001256369.1:c.247CTC[1], NM_001386447.1:c.283CTC[1], NM_001386448.1:c.283CTC[1], NR_036525.1:n.549CTC[1], NP_006632.2:p.Leu84del, NP_112477.1:p.Leu96del, NP_001243298.1:p.Leu84del, NP_001373376.1:p.Leu96del, NP_001373377.1:p.Leu96del

Select item 146126447310.

rs1461264473 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:45901622 (GRCh38)
3:45943114 (GRCh37)
Canonical SPDI:: NC_000003.12:45901621:C:T
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,synonymous_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000003.12:g.45901622C>T, NC_000003.11:g.45943114C>T, NG_033917.1:g.19103G>A, NG_029472.1:g.20119C>T, NM_006641.4:c.798C>T, NM_006641.3:c.798C>T, NM_031200.3:c.834C>T, NM_031200.2:c.834C>T, NM_001256369.2:c.798C>T, NM_001256369.1:c.798C>T, NM_001386447.1:c.834C>T, NM_001386448.1:c.834C>T, NR_036525.1:n.1100C>T

Select item 145969245011.

rs1459692450 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 3:45901177 (GRCh38)
3:45942669 (GRCh37)
Canonical SPDI:: NC_000003.12:45901176:T:A
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000003.12:g.45901177T>A, NC_000003.11:g.45942669T>A, NG_033917.1:g.19548A>T, NG_029472.1:g.19674T>A, NM_006641.4:c.353T>A, NM_006641.3:c.353T>A, NM_031200.3:c.389T>A, NM_031200.2:c.389T>A, NM_001256369.2:c.353T>A, NM_001256369.1:c.353T>A, NM_001386447.1:c.389T>A, NM_001386448.1:c.389T>A, NR_036525.1:n.655T>A, NP_006632.2:p.Phe118Tyr, NP_112477.1:p.Phe130Tyr, NP_001243298.1:p.Phe118Tyr, NP_001373376.1:p.Phe130Tyr, NP_001373377.1:p.Phe130Tyr

Select item 145241591612.

rs1452415916 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:45901640 (GRCh38)
3:45943132 (GRCh37)
Canonical SPDI:: NC_000003.12:45901639:G:A
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: coding_sequence_variant,genic_upstream_transcript_variant,intron_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.45901640G>A, NC_000003.11:g.45943132G>A, NG_033917.1:g.19085C>T, NG_029472.1:g.20137G>A, NM_006641.4:c.816G>A, NM_006641.3:c.816G>A, NM_031200.3:c.852G>A, NM_031200.2:c.852G>A, NM_001256369.2:c.816G>A, NM_001256369.1:c.816G>A, NM_001386447.1:c.852G>A, NM_001386448.1:c.852G>A, NR_036525.1:n.1118G>A, NP_006632.2:p.Met272Ile, NP_112477.1:p.Met284Ile, NP_001243298.1:p.Met272Ile, NP_001373376.1:p.Met284Ile, NP_001373377.1:p.Met284Ile

Select item 144204715313.

rs1442047153 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:45901103 (GRCh38)
3:45942595 (GRCh37)
Canonical SPDI:: NC_000003.12:45901102:C:T
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: coding_sequence_variant,genic_upstream_transcript_variant,intron_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000003.12:g.45901103C>T, NC_000003.11:g.45942595C>T, NG_033917.1:g.19622G>A, NG_029472.1:g.19600C>T, NM_006641.4:c.279C>T, NM_006641.3:c.279C>T, NM_031200.3:c.315C>T, NM_031200.2:c.315C>T, NM_001256369.2:c.279C>T, NM_001256369.1:c.279C>T, NM_001386447.1:c.315C>T, NM_001386448.1:c.315C>T, NR_036525.1:n.581C>T

Select item 144053643914.

rs1440536439 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 3:45901885 (GRCh38)
3:45943377 (GRCh37)
Canonical SPDI:: NC_000003.12:45901884:C:G
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: coding_sequence_variant,genic_upstream_transcript_variant,intron_variant,missense_variant
HGVS:: NC_000003.12:g.45901885C>G, NC_000003.11:g.45943377C>G, NG_033917.1:g.18840G>C, NG_029472.1:g.20382C>G, NM_006641.4:c.1061C>G, NM_006641.3:c.1061C>G, NM_031200.3:c.1097C>G, NM_031200.2:c.1097C>G, NM_001256369.2:c.1061C>G, NM_001256369.1:c.1061C>G, NM_001386447.1:c.1097C>G, NM_001386448.1:c.1097C>G, NR_036525.1:n.1363C>G, NP_006632.2:p.Ala354Gly, NP_112477.1:p.Ala366Gly, NP_001243298.1:p.Ala354Gly, NP_001373376.1:p.Ala366Gly, NP_001373377.1:p.Ala366Gly

Select item 143882650415.

rs1438826504 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:45901321 (GRCh38)
3:45942813 (GRCh37)
Canonical SPDI:: NC_000003.12:45901320:C:T
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: coding_sequence_variant,genic_upstream_transcript_variant,intron_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.45901321C>T, NC_000003.11:g.45942813C>T, NG_033917.1:g.19404G>A, NG_029472.1:g.19818C>T, NM_006641.4:c.497C>T, NM_006641.3:c.497C>T, NM_031200.3:c.533C>T, NM_031200.2:c.533C>T, NM_001256369.2:c.497C>T, NM_001256369.1:c.497C>T, NM_001386447.1:c.533C>T, NM_001386448.1:c.533C>T, NR_036525.1:n.799C>T, NP_006632.2:p.Ala166Val, NP_112477.1:p.Ala178Val, NP_001243298.1:p.Ala166Val, NP_001373376.1:p.Ala178Val, NP_001373377.1:p.Ala178Val

Select item 143876053716.

rs1438760537 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 3:45900828 (GRCh38)
3:45942320 (GRCh37)
Canonical SPDI:: NC_000003.12:45900827:G:T
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: coding_sequence_variant,genic_upstream_transcript_variant,intron_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.45900828G>T, NC_000003.11:g.45942320G>T, NG_033917.1:g.19897C>A, NG_029472.1:g.19325G>T, NM_006641.4:c.4G>T, NM_006641.3:c.4G>T, NM_031200.3:c.40G>T, NM_031200.2:c.40G>T, NM_001256369.2:c.4G>T, NM_001256369.1:c.4G>T, NM_001386447.1:c.40G>T, NM_001386448.1:c.40G>T, NR_036525.1:n.306G>T, NP_006632.2:p.Ala2Ser, NP_112477.1:p.Ala14Ser, NP_001243298.1:p.Ala2Ser, NP_001373376.1:p.Ala14Ser, NP_001373377.1:p.Ala14Ser

Select item 143667283717.

rs1436672837 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 3:45901705 (GRCh38)
3:45943197 (GRCh37)
Canonical SPDI:: NC_000003.12:45901704:C:A
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: coding_sequence_variant,genic_upstream_transcript_variant,intron_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: A=0.000047/1 (ALFA)
A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000003.12:g.45901705C>A, NC_000003.11:g.45943197C>A, NG_033917.1:g.19020G>T, NG_029472.1:g.20202C>A, NM_006641.4:c.881C>A, NM_006641.3:c.881C>A, NM_031200.3:c.917C>A, NM_031200.2:c.917C>A, NM_001256369.2:c.881C>A, NM_001256369.1:c.881C>A, NM_001386447.1:c.917C>A, NM_001386448.1:c.917C>A, NR_036525.1:n.1183C>A, NP_006632.2:p.Ala294Asp, NP_112477.1:p.Ala306Asp, NP_001243298.1:p.Ala294Asp, NP_001373376.1:p.Ala306Asp, NP_001373377.1:p.Ala306Asp

Select item 143257837318.

rs1432578373 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 3:45901770 (GRCh38)
3:45943262 (GRCh37)
Canonical SPDI:: NC_000003.12:45901769:C:G,NC_000003.12:45901769:C:T
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000028/1 (ALFA)
G=0.000004/1 (TOPMED)
T=0.000035/1 (TOMMO)
HGVS:: NC_000003.12:g.45901770C>G, NC_000003.12:g.45901770C>T, NC_000003.11:g.45943262C>G, NC_000003.11:g.45943262C>T, NG_033917.1:g.18955G>C, NG_033917.1:g.18955G>A, NG_029472.1:g.20267C>G, NG_029472.1:g.20267C>T, NM_006641.4:c.946C>G, NM_006641.4:c.946C>T, NM_006641.3:c.946C>G, NM_006641.3:c.946C>T, NM_031200.3:c.982C>G, NM_031200.3:c.982C>T, NM_031200.2:c.982C>G, NM_031200.2:c.982C>T, NM_001256369.2:c.946C>G, NM_001256369.2:c.946C>T, NM_001256369.1:c.946C>G, NM_001256369.1:c.946C>T, NM_001386447.1:c.982C>G, NM_001386447.1:c.982C>T, NM_001386448.1:c.982C>G, NM_001386448.1:c.982C>T, NR_036525.1:n.1248C>G, NR_036525.1:n.1248C>T, NP_006632.2:p.Leu316Val, NP_006632.2:p.Leu316Phe, NP_112477.1:p.Leu328Val, NP_112477.1:p.Leu328Phe, NP_001243298.1:p.Leu316Val, NP_001243298.1:p.Leu316Phe, NP_001373376.1:p.Leu328Val, NP_001373376.1:p.Leu328Phe, NP_001373377.1:p.Leu328Val, NP_001373377.1:p.Leu328Phe

Select item 142995371119.

rs1429953711 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:45901677 (GRCh38)
3:45943169 (GRCh37)
Canonical SPDI:: NC_000003.12:45901676:A:G
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.45901677A>G, NC_000003.11:g.45943169A>G, NG_033917.1:g.19048T>C, NG_029472.1:g.20174A>G, NM_006641.4:c.853A>G, NM_006641.3:c.853A>G, NM_031200.3:c.889A>G, NM_031200.2:c.889A>G, NM_001256369.2:c.853A>G, NM_001256369.1:c.853A>G, NM_001386447.1:c.889A>G, NM_001386448.1:c.889A>G, NR_036525.1:n.1155A>G, NP_006632.2:p.Ile285Val, NP_112477.1:p.Ile297Val, NP_001243298.1:p.Ile285Val, NP_001373376.1:p.Ile297Val, NP_001373377.1:p.Ile297Val

Select item 142771329320.

rs1427713293 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:45901377 (GRCh38)
3:45942869 (GRCh37)
Canonical SPDI:: NC_000003.12:45901376:A:G
Gene:: CCR9 (Varview), LZTFL1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0.000051/1 (ALFA)
G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000003.12:g.45901377A>G, NC_000003.11:g.45942869A>G, NG_033917.1:g.19348T>C, NG_029472.1:g.19874A>G, NM_006641.4:c.553A>G, NM_006641.3:c.553A>G, NM_031200.3:c.589A>G, NM_031200.2:c.589A>G, NM_001256369.2:c.553A>G, NM_001256369.1:c.553A>G, NM_001386447.1:c.589A>G, NM_001386448.1:c.589A>G, NR_036525.1:n.855A>G, NP_006632.2:p.Ile185Val, NP_112477.1:p.Ile197Val, NP_001243298.1:p.Ile185Val, NP_001373376.1:p.Ile197Val, NP_001373377.1:p.Ile197Val

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