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Links from Protein

Items: 1 to 20 of 772

1.
2.

rs1487786462 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    G>A [Show Flanks]
    Chromosome:
    5:140788408 (GRCh38)
    5:140167993 (GRCh37)
    Canonical SPDI:
    NC_000005.10:140788407:G:A
    Gene:
    PCDHA1 (Varview)
    Functional Consequence:
    intron_variant,synonymous_variant,coding_sequence_variant
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    A=0./0 (ALFA)
    A=0.000004/1 (GnomAD_exomes)
    A=0.000008/2 (TOPMED)
    HGVS:
    3.

    rs1485747567 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      G>A [Show Flanks]
      Chromosome:
      5:140787686 (GRCh38)
      5:140167271 (GRCh37)
      Canonical SPDI:
      NC_000005.10:140787685:G:A
      Gene:
      PCDHA1 (Varview)
      Functional Consequence:
      missense_variant,coding_sequence_variant
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      A=0./0 (ALFA)
      A=0.000004/1 (TOPMED)
      A=0.000014/2 (GnomAD)
      HGVS:
      5.

      rs1476065358 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        G>C [Show Flanks]
        Chromosome:
        5:140788189 (GRCh38)
        5:140167774 (GRCh37)
        Canonical SPDI:
        NC_000005.10:140788188:G:C
        Gene:
        PCDHA1 (Varview)
        Functional Consequence:
        synonymous_variant,intron_variant,coding_sequence_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        C=0./0 (ALFA)
        C=0.000007/1 (GnomAD)
        C=0.000008/2 (TOPMED)
        C=0.000566/9 (TOMMO)
        HGVS:
        6.

        rs1475625498 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          T>C [Show Flanks]
          Chromosome:
          5:140786825 (GRCh38)
          5:140166410 (GRCh37)
          Canonical SPDI:
          NC_000005.10:140786824:T:C
          Gene:
          PCDHA1 (Varview)
          Functional Consequence:
          missense_variant,coding_sequence_variant
          Validated:
          by frequency,by alfa
          MAF:
          C=0./0 (ALFA)
          C=0.000004/1 (TOPMED)
          HGVS:
          8.

          rs1475511194 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            C>T [Show Flanks]
            Chromosome:
            5:140788124 (GRCh38)
            5:140167709 (GRCh37)
            Canonical SPDI:
            NC_000005.10:140788123:C:T
            Gene:
            PCDHA1 (Varview)
            Functional Consequence:
            stop_gained,intron_variant,coding_sequence_variant
            Validated:
            by frequency,by alfa
            MAF:
            T=0./0 (ALFA)
            HGVS:
            9.

            rs1474100654 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              C>T [Show Flanks]
              Chromosome:
              5:140787493 (GRCh38)
              5:140167078 (GRCh37)
              Canonical SPDI:
              NC_000005.10:140787492:C:T
              Gene:
              PCDHA1 (Varview)
              Functional Consequence:
              synonymous_variant,coding_sequence_variant
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              T=0.000071/1 (ALFA)
              T=0.000004/1 (TOPMED)
              T=0.000014/2 (GnomAD)
              HGVS:
              10.

              rs1473545630 [Homo sapiens]
                Variant type:
                DELINS
                Alleles:
                ->TAT [Show Flanks]
                Chromosome:
                5:140787363 (GRCh38)
                5:140166949 (GRCh37)
                Canonical SPDI:
                NC_000005.10:140787363:TAT:TATTAT
                Gene:
                PCDHA1 (Varview)
                Functional Consequence:
                inframe_insertion,coding_sequence_variant
                Validated:
                by frequency,by alfa,by cluster
                MAF:
                TATTAT=0.000071/1 (ALFA)
                TAT=0.000014/2 (GnomAD)
                TAT=0.000015/4 (TOPMED)
                HGVS:
                11.

                rs1473301437 [Homo sapiens]
                  Variant type:
                  DELINS
                  Alleles:
                  A>- [Show Flanks]
                  Chromosome:
                  5:140788693 (GRCh38)
                  5:140168278 (GRCh37)
                  Canonical SPDI:
                  NC_000005.10:140788692:AA:A
                  Gene:
                  PCDHA1 (Varview)
                  Functional Consequence:
                  intron_variant,coding_sequence_variant,frameshift_variant
                  Validated:
                  by frequency,by alfa
                  MAF:
                  AA=0./0 (ALFA)
                  HGVS:
                  12.

                  rs1471467376 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    C>A,T [Show Flanks]
                    Chromosome:
                    5:140787913 (GRCh38)
                    5:140167498 (GRCh37)
                    Canonical SPDI:
                    NC_000005.10:140787912:C:A,NC_000005.10:140787912:C:T
                    Gene:
                    PCDHA1 (Varview)
                    Functional Consequence:
                    synonymous_variant,intron_variant,coding_sequence_variant
                    Validated:
                    by frequency,by alfa,by cluster
                    MAF:
                    T=0./0 (ALFA)
                    HGVS:
                    13.

                    rs1469089176 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      A>G [Show Flanks]
                      Chromosome:
                      5:140787050 (GRCh38)
                      5:140166635 (GRCh37)
                      Canonical SPDI:
                      NC_000005.10:140787049:A:G
                      Gene:
                      PCDHA1 (Varview)
                      Functional Consequence:
                      missense_variant,coding_sequence_variant
                      Validated:
                      by frequency,by alfa,by cluster
                      MAF:
                      G=0./0 (ALFA)
                      G=0.000008/2 (TOPMED)
                      G=0.000014/2 (GnomAD)
                      HGVS:
                      14.

                      rs1467635889 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        A>C [Show Flanks]
                        Chromosome:
                        5:140787079 (GRCh38)
                        5:140166664 (GRCh37)
                        Canonical SPDI:
                        NC_000005.10:140787078:A:C
                        Gene:
                        PCDHA1 (Varview)
                        Functional Consequence:
                        synonymous_variant,coding_sequence_variant
                        Validated:
                        by frequency,by alfa
                        MAF:
                        C=0./0 (ALFA)
                        C=0.000008/2 (TOPMED)
                        HGVS:
                        16.

                        rs1462197146 [Homo sapiens]
                          Variant type:
                          SNV
                          Alleles:
                          G>A [Show Flanks]
                          Chromosome:
                          5:140786909 (GRCh38)
                          5:140166494 (GRCh37)
                          Canonical SPDI:
                          NC_000005.10:140786908:G:A
                          Gene:
                          PCDHA1 (Varview)
                          Functional Consequence:
                          missense_variant,coding_sequence_variant
                          Validated:
                          by frequency,by alfa
                          MAF:
                          A=0./0 (ALFA)
                          A=0.000004/1 (TOPMED)
                          HGVS:
                          17.

                          rs1461708210 [Homo sapiens]
                            Variant type:
                            SNV
                            Alleles:
                            C>T [Show Flanks]
                            Chromosome:
                            5:140787798 (GRCh38)
                            5:140167383 (GRCh37)
                            Canonical SPDI:
                            NC_000005.10:140787797:C:T
                            Gene:
                            PCDHA1 (Varview)
                            Functional Consequence:
                            missense_variant,coding_sequence_variant
                            Validated:
                            by frequency,by alfa,by cluster
                            MAF:
                            T=0.000071/1 (ALFA)
                            T=0.000007/1 (GnomAD)
                            T=0.000019/5 (TOPMED)
                            HGVS:
                            18.

                            rs1459837603 [Homo sapiens]
                              Variant type:
                              SNV
                              Alleles:
                              C>G [Show Flanks]
                              Chromosome:
                              5:140786431 (GRCh38)
                              5:140166016 (GRCh37)
                              Canonical SPDI:
                              NC_000005.10:140786430:C:G
                              Gene:
                              PCDHA1 (Varview)
                              Functional Consequence:
                              synonymous_variant,coding_sequence_variant
                              Validated:
                              by frequency,by alfa,by cluster
                              MAF:
                              G=0./0 (ALFA)
                              G=0.000008/2 (TOPMED)
                              G=0.000014/2 (GnomAD)
                              HGVS:
                              19.

                              rs1458961705 [Homo sapiens]
                                Variant type:
                                SNV
                                Alleles:
                                C>G [Show Flanks]
                                Chromosome:
                                5:140787037 (GRCh38)
                                5:140166622 (GRCh37)
                                Canonical SPDI:
                                NC_000005.10:140787036:C:G
                                Gene:
                                PCDHA1 (Varview)
                                Functional Consequence:
                                synonymous_variant,coding_sequence_variant
                                Validated:
                                by frequency,by alfa,by cluster
                                MAF:
                                G=0./0 (ALFA)
                                G=0.000004/1 (TOPMED)
                                G=0.000007/1 (GnomAD)
                                HGVS:
                                20.

                                rs1454176953 [Homo sapiens]
                                  Variant type:
                                  SNV
                                  Alleles:
                                  A>G [Show Flanks]
                                  Chromosome:
                                  5:140787203 (GRCh38)
                                  5:140166788 (GRCh37)
                                  Canonical SPDI:
                                  NC_000005.10:140787202:A:G
                                  Gene:
                                  PCDHA1 (Varview)
                                  Functional Consequence:
                                  coding_sequence_variant,missense_variant
                                  Validated:
                                  by frequency,by alfa,by cluster
                                  MAF:
                                  G=0./0 (ALFA)
                                  G=0.000004/1 (GnomAD_exomes)
                                  G=0.000011/3 (TOPMED)
                                  G=0.000014/2 (GnomAD)
                                  HGVS:

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