SNP Links for Protein (Select 21735415) - SNP

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Links from Protein

Items: 1 to 20 of 643

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Select item 14880380981.

rs1488038098 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:3786346 (GRCh38)
20:3766993 (GRCh37)
Canonical SPDI:: NC_000020.11:3786345:C:T
Gene:: CDC25B (Varview), CENPB (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000020.11:g.3786346C>T, NC_000020.10:g.3766993C>T, NG_029040.2:g.4575C>T, NM_001810.6:c.138G>A, NM_001810.5:c.138G>A

Select item 14863014432.

rs1486301443 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 20:3784903 (GRCh38)
20:3765550 (GRCh37)
Canonical SPDI:: NC_000020.11:3784902:T:C
Gene:: CENPB (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
C=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.3784903T>C, NC_000020.10:g.3765550T>C, NG_029040.2:g.3132T>C, NM_001810.6:c.1581A>G, NM_001810.5:c.1581A>G

Select item 14850006393.

rs1485000639 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 20:3784990 (GRCh38)
20:3765637 (GRCh37)
Canonical SPDI:: NC_000020.11:3784989:G:C
Gene:: CDC25B (Varview), CENPB (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.3784990G>C, NC_000020.10:g.3765637G>C, NG_029040.2:g.3219G>C, NM_001810.6:c.1494C>G, NM_001810.5:c.1494C>G, NP_001801.1:p.Cys498Trp

Select item 14845994464.

rs1484599446 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 20:3786370 (GRCh38)
20:3767017 (GRCh37)
Canonical SPDI:: NC_000020.11:3786369:C:A,NC_000020.11:3786369:C:G
Gene:: CDC25B (Varview), CENPB (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
HGVS:: NC_000020.11:g.3786370C>A, NC_000020.11:g.3786370C>G, NC_000020.10:g.3767017C>A, NC_000020.10:g.3767017C>G, NG_029040.2:g.4599C>A, NG_029040.2:g.4599C>G, NM_001810.6:c.114G>T, NM_001810.6:c.114G>C, NM_001810.5:c.114G>T, NM_001810.5:c.114G>C

Select item 14843889935.

rs1484388993 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 20:3785858 (GRCh38)
20:3766505 (GRCh37)
Canonical SPDI:: NC_000020.11:3785857:G:A,NC_000020.11:3785857:G:C
Gene:: CDC25B (Varview), CENPB (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000020.11:g.3785858G>A, NC_000020.11:g.3785858G>C, NC_000020.10:g.3766505G>A, NC_000020.10:g.3766505G>C, NG_029040.2:g.4087G>A, NG_029040.2:g.4087G>C, NM_001810.6:c.626C>T, NM_001810.6:c.626C>G, NM_001810.5:c.626C>T, NM_001810.5:c.626C>G, NP_001801.1:p.Ala209Val, NP_001801.1:p.Ala209Gly

Select item 14843373396.

rs1484337339 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 20:3785500 (GRCh38)
20:3766147 (GRCh37)
Canonical SPDI:: NC_000020.11:3785499:T:C
Gene:: CDC25B (Varview), CENPB (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000020.11:g.3785500T>C, NC_000020.10:g.3766147T>C, NG_029040.2:g.3729T>C, NM_001810.6:c.984A>G, NM_001810.5:c.984A>G

Select item 14838293497.

rs1483829349 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 20:3785550 (GRCh38)
20:3766197 (GRCh37)
Canonical SPDI:: NC_000020.11:3785549:C:A
Gene:: CDC25B (Varview), CENPB (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: A=0.000009/2 (GnomAD_exomes)
HGVS:: NC_000020.11:g.3785550C>A, NC_000020.10:g.3766197C>A, NG_029040.2:g.3779C>A, NM_001810.6:c.934G>T, NM_001810.5:c.934G>T, NP_001801.1:p.Val312Leu

Select item 14833529238.

rs1483352923 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:3785776 (GRCh38)
20:3766423 (GRCh37)
Canonical SPDI:: NC_000020.11:3785775:G:A
Gene:: CDC25B (Varview), CENPB (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,upstream_transcript_variant,2KB_upstream_variant
HGVS:: NC_000020.11:g.3785776G>A, NC_000020.10:g.3766423G>A, NG_029040.2:g.4005G>A, NM_001810.6:c.708C>T, NM_001810.5:c.708C>T

Select item 14828001559.

rs1482800155 [Homo sapiens]

Variant type:: DELINS
Alleles:: TCCCTC>- [Show Flanks]
Chromosome:: 20:3785269 (GRCh38)
20:3765916 (GRCh37)
Canonical SPDI:: NC_000020.11:3785264:CCTCTCCCTC:CCTC
Gene:: CDC25B (Varview), CENPB (Varview)
Functional Consequence:: coding_sequence_variant,upstream_transcript_variant,2KB_upstream_variant,inframe_deletion
Validated:: by frequency,by alfa,by cluster
MAF:: CCTC=0./0 (ALFA)
-=0.000015/4 (TOPMED)
-=0.000022/3 (GnomAD)
HGVS:: NC_000020.11:g.3785269_3785274del, NC_000020.10:g.3765916_3765921del, NG_029040.2:g.3498_3503del, NM_001810.6:c.1214_1219del, NM_001810.5:c.1214_1219del, NP_001801.1:p.Gly405_Glu406del

Select item 148065334110.

rs1480653341 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 20:3785160 (GRCh38)
20:3765807 (GRCh37)
Canonical SPDI:: NC_000020.11:3785159:A:C
Gene:: CDC25B (Varview), CENPB (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.12975/3278 (ALFA)
C=0.003513/57 (TOMMO)
C=0.009057/58 (1000Genomes)
C=0.011097/1845 (GnomAD_exomes)
C=0.065309/1735 (GnomAD)
C=0.102195/298 (KOREAN)
HGVS:: NC_000020.11:g.3785160A>C, NC_000020.10:g.3765807A>C, NG_029040.2:g.3389A>C, NM_001810.6:c.1324T>G, NM_001810.5:c.1324T>G, NP_001801.1:p.Leu442Val

Select item 148025350711.

rs1480253507 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:3786394 (GRCh38)
20:3767041 (GRCh37)
Canonical SPDI:: NC_000020.11:3786393:C:T
Gene:: CDC25B (Varview), CENPB (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0.0001/1 (ALFA)
HGVS:: NC_000020.11:g.3786394C>T, NC_000020.10:g.3767041C>T, NG_029040.2:g.4623C>T, NM_001810.6:c.90G>A, NM_001810.5:c.90G>A

Select item 147970496912.

rs1479704969 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 20:3786026 (GRCh38)
20:3766673 (GRCh37)
Canonical SPDI:: NC_000020.11:3786025:G:T
Gene:: CDC25B (Varview), CENPB (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,upstream_transcript_variant,2KB_upstream_variant
HGVS:: NC_000020.11:g.3786026G>T, NC_000020.10:g.3766673G>T, NG_029040.2:g.4255G>T, NM_001810.6:c.458C>A, NM_001810.5:c.458C>A, NP_001801.1:p.Ala153Glu

Select item 147733913213.

rs1477339132 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:3785365 (GRCh38)
20:3766012 (GRCh37)
Canonical SPDI:: NC_000020.11:3785364:C:T
Gene:: CDC25B (Varview), CENPB (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,upstream_transcript_variant,2KB_upstream_variant
HGVS:: NC_000020.11:g.3785365C>T, NC_000020.10:g.3766012C>T, NG_029040.2:g.3594C>T, NM_001810.6:c.1119G>A, NM_001810.5:c.1119G>A

Select item 147382082314.

rs1473820823 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 20:3785440 (GRCh38)
20:3766087 (GRCh37)
Canonical SPDI:: NC_000020.11:3785439:C:A
Gene:: CDC25B (Varview), CENPB (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000020.11:g.3785440C>A, NC_000020.10:g.3766087C>A, NG_029040.2:g.3669C>A, NM_001810.6:c.1044G>T, NM_001810.5:c.1044G>T

Select item 147283717215.

rs1472837172 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 20:3785729 (GRCh38)
20:3766376 (GRCh37)
Canonical SPDI:: NC_000020.11:3785728:G:T
Gene:: CDC25B (Varview), CENPB (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000011/3 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000020.11:g.3785729G>T, NC_000020.10:g.3766376G>T, NG_029040.2:g.3958G>T, NM_001810.6:c.755C>A, NM_001810.5:c.755C>A, NP_001801.1:p.Ala252Glu

Select item 147228416816.

rs1472284168 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 20:3785133 (GRCh38)
20:3765780 (GRCh37)
Canonical SPDI:: NC_000020.11:3785132:C:A,NC_000020.11:3785132:C:G
Gene:: CDC25B (Varview), CENPB (Varview)
Functional Consequence:: missense_variant,stop_gained,upstream_transcript_variant,coding_sequence_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.3785133C>A, NC_000020.11:g.3785133C>G, NC_000020.10:g.3765780C>A, NC_000020.10:g.3765780C>G, NG_029040.2:g.3362C>A, NG_029040.2:g.3362C>G, NM_001810.6:c.1351G>T, NM_001810.6:c.1351G>C, NM_001810.5:c.1351G>T, NM_001810.5:c.1351G>C, NP_001801.1:p.Glu451Ter, NP_001801.1:p.Glu451Gln

Select item 147222015217.

rs1472220152 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 20:3785519 (GRCh38)
20:3766166 (GRCh37)
Canonical SPDI:: NC_000020.11:3785518:A:G
Gene:: CDC25B (Varview), CENPB (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
G=0.000014/3 (GnomAD_exomes)
HGVS:: NC_000020.11:g.3785519A>G, NC_000020.10:g.3766166A>G, NG_029040.2:g.3748A>G, NM_001810.6:c.965T>C, NM_001810.5:c.965T>C, NP_001801.1:p.Val322Ala

Select item 146989676318.

rs1469896763 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 20:3784742 (GRCh38)
20:3765389 (GRCh37)
Canonical SPDI:: NC_000020.11:3784741:A:C
Gene:: CENPB (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.3784742A>C, NC_000020.10:g.3765389A>C, NG_029040.2:g.2971A>C, NM_001810.6:c.1742T>G, NM_001810.5:c.1742T>G, NP_001801.1:p.Val581Gly

Select item 146943626919.

rs1469436269 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:3786313 (GRCh38)
20:3766960 (GRCh37)
Canonical SPDI:: NC_000020.11:3786312:G:A
Gene:: CDC25B (Varview), CENPB (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000020.11:g.3786313G>A, NC_000020.10:g.3766960G>A, NG_029040.2:g.4542G>A, NM_001810.6:c.171C>T, NM_001810.5:c.171C>T

Select item 146553439020.

rs1465534390 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:3785312 (GRCh38)
20:3765959 (GRCh37)
Canonical SPDI:: NC_000020.11:3785311:C:T
Gene:: CDC25B (Varview), CENPB (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000020.11:g.3785312C>T, NC_000020.10:g.3765959C>T, NG_029040.2:g.3541C>T, NM_001810.6:c.1172G>A, NM_001810.5:c.1172G>A, NP_001801.1:p.Gly391Asp