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Links from Protein

Items: 1 to 20 of 146

1.

rs1481266722 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    G>A [Show Flanks]
    Chromosome:
    2:27102187 (GRCh38)
    2:27325055 (GRCh37)
    Canonical SPDI:
    NC_000002.12:27102186:G:A
    Gene:
    CGREF1 (Varview)
    Functional Consequence:
    synonymous_variant,coding_sequence_variant
    HGVS:
    3.

    rs1478520975 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      C>T [Show Flanks]
      Chromosome:
      2:27102366 (GRCh38)
      2:27325234 (GRCh37)
      Canonical SPDI:
      NC_000002.12:27102365:C:T
      Gene:
      CGREF1 (Varview)
      Functional Consequence:
      intron_variant,missense_variant,coding_sequence_variant
      Validated:
      by frequency
      MAF:
      T=0.000004/1 (GnomAD_exomes)
      HGVS:
      4.

      rs1472413052 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        G>A [Show Flanks]
        Chromosome:
        2:27102202 (GRCh38)
        2:27325070 (GRCh37)
        Canonical SPDI:
        NC_000002.12:27102201:G:A
        Gene:
        CGREF1 (Varview)
        Functional Consequence:
        coding_sequence_variant,synonymous_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        A=0.000028/1 (ALFA)
        A=0.000004/1 (GnomAD_exomes)
        A=0.000004/1 (TOPMED)
        A=0.000007/1 (GnomAD)
        HGVS:
        5.

        rs1454084154 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          T>A [Show Flanks]
          Chromosome:
          2:27102392 (GRCh38)
          2:27325260 (GRCh37)
          Canonical SPDI:
          NC_000002.12:27102391:T:A
          Gene:
          CGREF1 (Varview), LOC124907744 (Varview)
          Functional Consequence:
          coding_sequence_variant,missense_variant,intron_variant,upstream_transcript_variant,2KB_upstream_variant
          Validated:
          by frequency,by alfa,by cluster
          MAF:
          A=0./0 (ALFA)
          A=0.000004/1 (GnomAD_exomes)
          A=0.000004/1 (TOPMED)
          A=0.000142/2 (TOMMO)
          HGVS:
          7.

          rs1441978165 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            A>G [Show Flanks]
            Chromosome:
            2:27104362 (GRCh38)
            2:27327230 (GRCh37)
            Canonical SPDI:
            NC_000002.12:27104361:A:G
            Gene:
            CGREF1 (Varview), LOC124907744 (Varview)
            Functional Consequence:
            missense_variant,2KB_upstream_variant,upstream_transcript_variant,coding_sequence_variant,5_prime_UTR_variant
            Validated:
            by frequency,by alfa
            MAF:
            G=0./0 (ALFA)
            G=0.000008/2 (TOPMED)
            HGVS:
            9.

            rs1435263146 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              T>A [Show Flanks]
              Chromosome:
              2:27104354 (GRCh38)
              2:27327222 (GRCh37)
              Canonical SPDI:
              NC_000002.12:27104353:T:A
              Gene:
              CGREF1 (Varview), LOC124907744 (Varview)
              Functional Consequence:
              missense_variant,2KB_upstream_variant,upstream_transcript_variant,coding_sequence_variant,5_prime_UTR_variant
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              A=0./0 (ALFA)
              A=0.000004/1 (GnomAD_exomes)
              A=0.000007/1 (GnomAD)
              A=0.000008/2 (TOPMED)
              HGVS:
              11.

              rs1422749977 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                G>C,T [Show Flanks]
                Chromosome:
                2:27104337 (GRCh38)
                2:27327205 (GRCh37)
                Canonical SPDI:
                NC_000002.12:27104336:G:C,NC_000002.12:27104336:G:T
                Gene:
                CGREF1 (Varview), LOC124907744 (Varview)
                Functional Consequence:
                upstream_transcript_variant,2KB_upstream_variant,coding_sequence_variant,5_prime_UTR_variant,missense_variant,synonymous_variant
                Validated:
                by frequency,by alfa,by cluster
                MAF:
                T=0./0 (ALFA)
                C=0.000004/1 (GnomAD_exomes)
                T=0.000004/1 (TOPMED)
                HGVS:
                12.

                rs1419578820 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  C>T [Show Flanks]
                  Chromosome:
                  2:27102381 (GRCh38)
                  2:27325249 (GRCh37)
                  Canonical SPDI:
                  NC_000002.12:27102380:C:T
                  Gene:
                  CGREF1 (Varview), LOC124907744 (Varview)
                  Functional Consequence:
                  upstream_transcript_variant,intron_variant,2KB_upstream_variant,coding_sequence_variant,missense_variant
                  Validated:
                  by frequency
                  MAF:
                  T=0.000004/1 (GnomAD_exomes)
                  HGVS:
                  13.

                  rs1404762423 [Homo sapiens]
                    Variant type:
                    DELINS
                    Alleles:
                    ->GGCCAGAGCAGCTGTCAACATGGACAGCAGCTCCAGG [Show Flanks]
                    Chromosome:
                    2:27102118 (GRCh38)
                    2:27324987 (GRCh37)
                    Canonical SPDI:
                    NC_000002.12:27102118:GCAGCTCCAGGGGCCAGAGCAGCTGTCAACATGGACAGCAGCTCCAGG:GCAGCTCCAGGGGCCAGAGCAGCTGTCAACATGGACAGCAGCTCCAGGGGCCAGAGCAGCTGTCAACATGGACAGCAGCTCCAGG
                    Gene:
                    CGREF1 (Varview)
                    Functional Consequence:
                    coding_sequence_variant,frameshift_variant
                    Validated:
                    by frequency
                    MAF:
                    GCAGCTCCAGGGGCCAGAGCAGCTGTCAACATGGACA=0.000004/1 (GnomAD_exomes)
                    HGVS:
                    14.

                    rs1397881088 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      T>A,C,G [Show Flanks]
                      Chromosome:
                      2:27099836 (GRCh38)
                      2:27322704 (GRCh37)
                      Canonical SPDI:
                      NC_000002.12:27099835:T:A,NC_000002.12:27099835:T:C,NC_000002.12:27099835:T:G
                      Gene:
                      KHK (Varview), CGREF1 (Varview)
                      Functional Consequence:
                      coding_sequence_variant,genic_downstream_transcript_variant,3_prime_UTR_variant,missense_variant
                      Validated:
                      by frequency,by alfa,by cluster
                      MAF:
                      G=0./0 (ALFA)
                      C=0.000004/1 (TOPMED)
                      HGVS:
                      NC_000002.12:g.27099836T>A, NC_000002.12:g.27099836T>C, NC_000002.12:g.27099836T>G, NC_000002.11:g.27322704T>A, NC_000002.11:g.27322704T>C, NC_000002.11:g.27322704T>G, NG_012199.2:g.18094T>A, NG_012199.2:g.18094T>C, NG_012199.2:g.18094T>G, NM_006488.3:c.*86T>A, NM_006488.3:c.*86T>C, NM_006488.3:c.*86T>G, NM_006488.2:c.*86T>A, NM_006488.2:c.*86T>C, NM_006488.2:c.*86T>G, NM_000221.3:c.*86T>A, NM_000221.3:c.*86T>C, NM_000221.3:c.*86T>G, NM_000221.2:c.*86T>A, NM_000221.2:c.*86T>C, NM_000221.2:c.*86T>G, XM_005264294.5:c.*86T>A, XM_005264294.5:c.*86T>C, XM_005264294.5:c.*86T>G, XM_005264294.4:c.*86T>A, XM_005264294.4:c.*86T>C, XM_005264294.4:c.*86T>G, XM_005264294.3:c.*86T>A, XM_005264294.3:c.*86T>C, XM_005264294.3:c.*86T>G, XM_005264294.2:c.*86T>A, XM_005264294.2:c.*86T>C, XM_005264294.2:c.*86T>G, XM_005264294.1:c.*86T>A, XM_005264294.1:c.*86T>C, XM_005264294.1:c.*86T>G, XM_005264296.5:c.*86T>A, XM_005264296.5:c.*86T>C, XM_005264296.5:c.*86T>G, XM_005264296.4:c.*86T>A, XM_005264296.4:c.*86T>C, XM_005264296.4:c.*86T>G, XM_005264296.3:c.*86T>A, XM_005264296.3:c.*86T>C, XM_005264296.3:c.*86T>G, XM_005264296.2:c.*86T>A, XM_005264296.2:c.*86T>C, XM_005264296.2:c.*86T>G, XM_005264296.1:c.*86T>A, XM_005264296.1:c.*86T>C, XM_005264296.1:c.*86T>G, XM_005264298.5:c.*86T>A, XM_005264298.5:c.*86T>C, XM_005264298.5:c.*86T>G, XM_005264298.4:c.*86T>A, XM_005264298.4:c.*86T>C, XM_005264298.4:c.*86T>G, XM_005264298.3:c.*86T>A, XM_005264298.3:c.*86T>C, XM_005264298.3:c.*86T>G, XM_005264298.2:c.*86T>A, XM_005264298.2:c.*86T>C, XM_005264298.2:c.*86T>G, XM_005264298.1:c.*86T>A, XM_005264298.1:c.*86T>C, XM_005264298.1:c.*86T>G, XM_017004060.3:c.*86T>A, XM_017004060.3:c.*86T>C, XM_017004060.3:c.*86T>G, XM_017004060.2:c.*86T>A, XM_017004060.2:c.*86T>C, XM_017004060.2:c.*86T>G, XM_017004060.1:c.*86T>A, XM_017004060.1:c.*86T>C, XM_017004060.1:c.*86T>G, XM_017004061.3:c.*86T>A, XM_017004061.3:c.*86T>C, XM_017004061.3:c.*86T>G, XM_017004061.2:c.*86T>A, XM_017004061.2:c.*86T>C, XM_017004061.2:c.*86T>G, XM_017004061.1:c.*86T>A, XM_017004061.1:c.*86T>C, XM_017004061.1:c.*86T>G, NM_001301324.2:c.*25A>T, NM_001301324.2:c.*25A>G, NM_001301324.2:c.*25A>C, NM_001301324.1:c.*25A>T, NM_001301324.1:c.*25A>G, NM_001301324.1:c.*25A>C, NM_001166240.2:c.347A>T, NM_001166240.2:c.347A>G, NM_001166240.2:c.347A>C, NM_001166240.1:c.347A>T, NM_001166240.1:c.347A>G, NM_001166240.1:c.347A>C, NM_001166241.1:c.287A>T, NM_001166241.1:c.287A>G, NM_001166241.1:c.287A>C, NP_001159712.1:p.Asn116Ile, NP_001159712.1:p.Asn116Ser, NP_001159712.1:p.Asn116Thr
                      15.

                      rs1397577308 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        A>G [Show Flanks]
                        Chromosome:
                        2:27104298 (GRCh38)
                        2:27327166 (GRCh37)
                        Canonical SPDI:
                        NC_000002.12:27104297:A:G
                        Gene:
                        CGREF1 (Varview), LOC124907744 (Varview)
                        Functional Consequence:
                        synonymous_variant,coding_sequence_variant,upstream_transcript_variant,2KB_upstream_variant,initiator_codon_variant,missense_variant
                        Validated:
                        by frequency,by alfa,by cluster
                        MAF:
                        G=0./0 (ALFA)
                        G=0.000004/1 (TOPMED)
                        G=0.000005/1 (GnomAD_exomes)
                        G=0.000007/1 (GnomAD)
                        HGVS:
                        16.

                        rs1386336284 [Homo sapiens]
                          Variant type:
                          SNV
                          Alleles:
                          C>T [Show Flanks]
                          Chromosome:
                          2:27102379 (GRCh38)
                          2:27325247 (GRCh37)
                          Canonical SPDI:
                          NC_000002.12:27102378:C:T
                          Gene:
                          CGREF1 (Varview), LOC124907744 (Varview)
                          Functional Consequence:
                          intron_variant,synonymous_variant,2KB_upstream_variant,coding_sequence_variant,upstream_transcript_variant
                          Validated:
                          by frequency,by alfa,by cluster
                          MAF:
                          T=0./0 (ALFA)
                          T=0.000004/1 (TOPMED)
                          T=0.000007/1 (GnomAD)
                          HGVS:
                          18.

                          rs1379611832 [Homo sapiens]
                            Variant type:
                            DEL
                            Alleles:
                            CT>- [Show Flanks]
                            Chromosome:
                            2:27104345 (GRCh38)
                            2:27327213 (GRCh37)
                            Canonical SPDI:
                            NC_000002.12:27104344:CT:
                            Gene:
                            CGREF1 (Varview), LOC124907744 (Varview)
                            Functional Consequence:
                            5_prime_UTR_variant,frameshift_variant,coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant
                            Validated:
                            by frequency,by alfa,by cluster
                            MAF:
                            -=0./0 (ALFA)
                            -=0.000004/1 (GnomAD_exomes)
                            -=0.000007/1 (GnomAD)
                            -=0.000008/2 (TOPMED)
                            HGVS:
                            19.

                            rs1377533282 [Homo sapiens]
                              Variant type:
                              SNV
                              Alleles:
                              C>G [Show Flanks]
                              Chromosome:
                              2:27102175 (GRCh38)
                              2:27325043 (GRCh37)
                              Canonical SPDI:
                              NC_000002.12:27102174:C:G
                              Gene:
                              CGREF1 (Varview)
                              Functional Consequence:
                              coding_sequence_variant,missense_variant
                              Validated:
                              by frequency,by alfa
                              MAF:
                              G=0./0 (ALFA)
                              G=0.000004/1 (TOPMED)
                              HGVS:
                              20.

                              rs1376496013 [Homo sapiens]
                                Variant type:
                                SNV
                                Alleles:
                                A>C [Show Flanks]
                                Chromosome:
                                2:27102374 (GRCh38)
                                2:27325242 (GRCh37)
                                Canonical SPDI:
                                NC_000002.12:27102373:A:C
                                Gene:
                                CGREF1 (Varview)
                                Functional Consequence:
                                coding_sequence_variant,missense_variant,intron_variant
                                Validated:
                                by frequency,by cluster
                                MAF:
                                C=0.000004/1 (GnomAD_exomes)
                                C=0.000007/1 (GnomAD)
                                HGVS:

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