Links from Protein
Items: 1 to 20 of 99
1.
rs1488799700 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A,T
[Show Flanks]
- Chromosome:
- 5:140647575
(GRCh38)
5:140027160
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140647574:C:A,NC_000005.10:140647574:C:T
- Gene:
- IK (Varview), NDUFA2 (Varview), TMCO6 (Varview), MIR3655 (Varview)
- Functional Consequence:
- synonymous_variant,upstream_transcript_variant,coding_sequence_variant,3_prime_UTR_variant,downstream_transcript_variant,non_coding_transcript_variant,genic_downstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
- HGVS:
NC_000005.10:g.140647575C>A, NC_000005.10:g.140647575C>T, NC_000005.9:g.140027160C>A, NC_000005.9:g.140027160C>T, NG_021417.1:g.5211G>T, NG_021417.1:g.5211G>A, NM_002488.5:c.9G>T, NM_002488.5:c.9G>A, NM_002488.4:c.9G>T, NM_002488.4:c.9G>A, NR_033697.2:n.56G>T, NR_033697.2:n.56G>A, NR_033697.1:n.211G>T, NR_033697.1:n.211G>A, NM_001185012.2:c.9G>T, NM_001185012.2:c.9G>A, NM_001185012.1:c.9G>T, NM_001185012.1:c.9G>A, XM_047417354.1:c.*758C>A, XM_047417354.1:c.*758C>T
2.
rs1482102411 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G,T
[Show Flanks]
- Chromosome:
- 5:140647534
(GRCh38)
5:140027119
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140647533:C:G,NC_000005.10:140647533:C:T
- Gene:
- IK (Varview), NDUFA2 (Varview), TMCO6 (Varview), MIR3655 (Varview)
- Functional Consequence:
- upstream_transcript_variant,coding_sequence_variant,3_prime_UTR_variant,downstream_transcript_variant,non_coding_transcript_variant,genic_downstream_transcript_variant,missense_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0.000047/1
(
ALFA)
G=0.000004/1
(GnomAD_exomes)
- HGVS:
NC_000005.10:g.140647534C>G, NC_000005.10:g.140647534C>T, NC_000005.9:g.140027119C>G, NC_000005.9:g.140027119C>T, NG_021417.1:g.5252G>C, NG_021417.1:g.5252G>A, NM_002488.5:c.50G>C, NM_002488.5:c.50G>A, NM_002488.4:c.50G>C, NM_002488.4:c.50G>A, NR_033697.2:n.97G>C, NR_033697.2:n.97G>A, NR_033697.1:n.252G>C, NR_033697.1:n.252G>A, NM_001185012.2:c.50G>C, NM_001185012.2:c.50G>A, NM_001185012.1:c.50G>C, NM_001185012.1:c.50G>A, XM_047417354.1:c.*717C>G, XM_047417354.1:c.*717C>T, NP_002479.1:p.Arg17Pro, NP_002479.1:p.Arg17His, NP_001171941.1:p.Arg17Pro, NP_001171941.1:p.Arg17His
3.
rs1468402919 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>T
[Show Flanks]
- Chromosome:
- 5:140647543
(GRCh38)
5:140027128
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140647542:A:T
- Gene:
- IK (Varview), NDUFA2 (Varview), TMCO6 (Varview), MIR3655 (Varview)
- Functional Consequence:
- missense_variant,non_coding_transcript_variant,2KB_upstream_variant,genic_downstream_transcript_variant,3_prime_UTR_variant,coding_sequence_variant,downstream_transcript_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000011/3
(TOPMED)
T=0.000021/3
(GnomAD)
T=0.000342/1
(KOREAN)
T=0.000495/8
(TOMMO)
- HGVS:
NC_000005.10:g.140647543A>T, NC_000005.9:g.140027128A>T, NG_021417.1:g.5243T>A, NM_002488.5:c.41T>A, NM_002488.4:c.41T>A, NR_033697.2:n.88T>A, NR_033697.1:n.243T>A, NM_001185012.2:c.41T>A, NM_001185012.1:c.41T>A, XM_047417354.1:c.*726A>T, NP_002479.1:p.Leu14Gln, NP_001171941.1:p.Leu14Gln
4.
rs1440146660 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G,T
[Show Flanks]
- Chromosome:
- 5:140647362
(GRCh38)
5:140026947
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140647361:C:G,NC_000005.10:140647361:C:T
- Gene:
- IK (Varview), NDUFA2 (Varview), TMCO6 (Varview), MIR3655 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,3_prime_UTR_variant,genic_downstream_transcript_variant,synonymous_variant,upstream_transcript_variant,2KB_upstream_variant,coding_sequence_variant,missense_variant,downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000005.10:g.140647362C>G, NC_000005.10:g.140647362C>T, NC_000005.9:g.140026947C>G, NC_000005.9:g.140026947C>T, NG_021417.1:g.5424G>C, NG_021417.1:g.5424G>A, NM_002488.5:c.102G>C, NM_002488.5:c.102G>A, NM_002488.4:c.102G>C, NM_002488.4:c.102G>A, NR_033697.2:n.269G>C, NR_033697.2:n.269G>A, NR_033697.1:n.424G>C, NR_033697.1:n.424G>A, NM_001185012.2:c.102G>C, NM_001185012.2:c.102G>A, NM_001185012.1:c.102G>C, NM_001185012.1:c.102G>A, XM_047417354.1:c.*545C>G, XM_047417354.1:c.*545C>T, NP_002479.1:p.Arg34Ser, NP_001171941.1:p.Arg34Ser
5.
rs1437277419 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 5:140647317
(GRCh38)
5:140026902
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140647316:G:A
- Gene:
- IK (Varview), NDUFA2 (Varview), TMCO6 (Varview), MIR3655 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,3_prime_UTR_variant,genic_downstream_transcript_variant,synonymous_variant,upstream_transcript_variant,2KB_upstream_variant,coding_sequence_variant,downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.000071/1
(
ALFA)
A=0.000004/1
(GnomAD_exomes)
A=0.000011/3
(TOPMED)
A=0.000014/2
(GnomAD)
- HGVS:
6.
rs1433497968 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 5:140647318
(GRCh38)
5:140026903
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140647317:G:A
- Gene:
- IK (Varview), NDUFA2 (Varview), TMCO6 (Varview), MIR3655 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,3_prime_UTR_variant,genic_downstream_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,coding_sequence_variant,missense_variant,downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
- HGVS:
NC_000005.10:g.140647318G>A, NC_000005.9:g.140026903G>A, NG_021417.1:g.5468C>T, NM_002488.5:c.146C>T, NM_002488.4:c.146C>T, NR_033697.2:n.313C>T, NR_033697.1:n.468C>T, NM_001185012.2:c.146C>T, NM_001185012.1:c.146C>T, XM_047417354.1:c.*501G>A, NP_002479.1:p.Pro49Leu, NP_001171941.1:p.Pro49Leu
7.
rs1399197160 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 5:140647557
(GRCh38)
5:140027142
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140647556:T:C
- Gene:
- IK (Varview), NDUFA2 (Varview), TMCO6 (Varview), MIR3655 (Varview)
- Functional Consequence:
- synonymous_variant,downstream_transcript_variant,genic_downstream_transcript_variant,2KB_upstream_variant,3_prime_UTR_variant,coding_sequence_variant,non_coding_transcript_variant,upstream_transcript_variant
- Validated:
- by frequency
- MAF:
C=0.000004/1
(GnomAD_exomes)
- HGVS:
8.
rs1394010286 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>T
[Show Flanks]
- Chromosome:
- 5:140647506
(GRCh38)
5:140027091
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140647505:G:T
- Gene:
- IK (Varview), NDUFA2 (Varview), TMCO6 (Varview), MIR3655 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,synonymous_variant,non_coding_transcript_variant,coding_sequence_variant,2KB_upstream_variant,3_prime_UTR_variant,downstream_transcript_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
- HGVS:
9.
rs1378161060 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 5:140647304
(GRCh38)
5:140026889
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140647303:G:A
- Gene:
- IK (Varview), NDUFA2 (Varview), TMCO6 (Varview), MIR3655 (Varview)
- Functional Consequence:
- 3_prime_UTR_variant,non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant,genic_downstream_transcript_variant,coding_sequence_variant,downstream_transcript_variant,synonymous_variant
- Validated:
- by frequency
- MAF:
A=0.000004/1
(GnomAD_exomes)
- HGVS:
10.
rs1360989040 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 5:140647556
(GRCh38)
5:140027141
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140647555:C:T
- Gene:
- IK (Varview), NDUFA2 (Varview), TMCO6 (Varview), MIR3655 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,downstream_transcript_variant,genic_downstream_transcript_variant,missense_variant,2KB_upstream_variant,upstream_transcript_variant,3_prime_UTR_variant,coding_sequence_variant
- Clinical significance:
- uncertain-significance
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000008/2
(TOPMED)
T=0.000012/3
(GnomAD_exomes)
- HGVS:
NC_000005.10:g.140647556C>T, NC_000005.9:g.140027141C>T, NG_021417.1:g.5230G>A, NM_002488.5:c.28G>A, NM_002488.4:c.28G>A, NR_033697.2:n.75G>A, NR_033697.1:n.230G>A, NM_001185012.2:c.28G>A, NM_001185012.1:c.28G>A, XM_047417354.1:c.*739C>T, NP_002479.1:p.Val10Ile, NP_001171941.1:p.Val10Ile
11.
rs1359717783 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 5:140645721
(GRCh38)
5:140025306
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140645720:G:A
- Gene:
- NDUFA2 (Varview), TMCO6 (Varview)
- Functional Consequence:
- synonymous_variant,downstream_transcript_variant,genic_downstream_transcript_variant,intron_variant,coding_sequence_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.000043/1
(
ALFA)
A=0.000004/1
(GnomAD_exomes)
A=0.000004/1
(TOPMED)
A=0.000014/2
(GnomAD)
- HGVS:
12.
rs1316670723 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A,G
[Show Flanks]
- Chromosome:
- 5:140645719
(GRCh38)
5:140025304
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140645718:C:A,NC_000005.10:140645718:C:G
- Gene:
- NDUFA2 (Varview), TMCO6 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant,coding_sequence_variant,missense_variant,downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(GnomAD_exomes)
A=0.000008/2
(TOPMED)
- HGVS:
NC_000005.10:g.140645719C>A, NC_000005.10:g.140645719C>G, NC_000005.9:g.140025304C>A, NC_000005.9:g.140025304C>G, NG_021417.1:g.7067G>T, NG_021417.1:g.7067G>C, NM_001185012.2:c.215G>T, NM_001185012.2:c.215G>C, NM_001185012.1:c.215G>T, NM_001185012.1:c.215G>C, NP_001171941.1:p.Arg72Met, NP_001171941.1:p.Arg72Thr
13.
rs1314846594 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 5:140647484
(GRCh38)
5:140027069
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140647483:T:G
- Gene:
- IK (Varview), NDUFA2 (Varview), TMCO6 (Varview), MIR3655 (Varview)
- Functional Consequence:
- upstream_transcript_variant,synonymous_variant,non_coding_transcript_variant,genic_downstream_transcript_variant,coding_sequence_variant,2KB_upstream_variant,3_prime_UTR_variant,downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000007/1
(GnomAD)
- HGVS:
14.
rs1313396905 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 5:140647525
(GRCh38)
5:140027110
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140647524:C:T
- Gene:
- IK (Varview), NDUFA2 (Varview), TMCO6 (Varview), MIR3655 (Varview)
- Functional Consequence:
- upstream_transcript_variant,non_coding_transcript_variant,genic_downstream_transcript_variant,coding_sequence_variant,2KB_upstream_variant,3_prime_UTR_variant,missense_variant,downstream_transcript_variant
- HGVS:
NC_000005.10:g.140647525C>T, NC_000005.9:g.140027110C>T, NG_021417.1:g.5261G>A, NM_002488.5:c.59G>A, NM_002488.4:c.59G>A, NR_033697.2:n.106G>A, NR_033697.1:n.261G>A, NM_001185012.2:c.59G>A, NM_001185012.1:c.59G>A, XM_047417354.1:c.*708C>T, NP_002479.1:p.Arg20His, NP_001171941.1:p.Arg20His
15.
rs1296193940 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A,T
[Show Flanks]
- Chromosome:
- 5:140647561
(GRCh38)
5:140027146
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140647560:C:A,NC_000005.10:140647560:C:T
- Gene:
- IK (Varview), NDUFA2 (Varview), TMCO6 (Varview), MIR3655 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,missense_variant,coding_sequence_variant,genic_downstream_transcript_variant,downstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(GnomAD_exomes)
A=0.000007/1
(GnomAD)
- HGVS:
NC_000005.10:g.140647561C>A, NC_000005.10:g.140647561C>T, NC_000005.9:g.140027146C>A, NC_000005.9:g.140027146C>T, NG_021417.1:g.5225G>T, NG_021417.1:g.5225G>A, NM_002488.5:c.23G>T, NM_002488.5:c.23G>A, NM_002488.4:c.23G>T, NM_002488.4:c.23G>A, NR_033697.2:n.70G>T, NR_033697.2:n.70G>A, NR_033697.1:n.225G>T, NR_033697.1:n.225G>A, NM_001185012.2:c.23G>T, NM_001185012.2:c.23G>A, NM_001185012.1:c.23G>T, NM_001185012.1:c.23G>A, XM_047417354.1:c.*744C>A, XM_047417354.1:c.*744C>T, NP_002479.1:p.Arg8Leu, NP_002479.1:p.Arg8Gln, NP_001171941.1:p.Arg8Leu, NP_001171941.1:p.Arg8Gln
17.
rs1287014184 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 5:140647538
(GRCh38)
5:140027123
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140647537:G:A
- Gene:
- IK (Varview), NDUFA2 (Varview), TMCO6 (Varview), MIR3655 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,coding_sequence_variant,genic_downstream_transcript_variant,synonymous_variant,downstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000011/3
(TOPMED)
- HGVS:
18.
rs1285249515 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G,T
[Show Flanks]
- Chromosome:
- 5:140647278
(GRCh38)
5:140026863
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140647277:C:G,NC_000005.10:140647277:C:T
- Gene:
- IK (Varview), NDUFA2 (Varview), TMCO6 (Varview), MIR3655 (Varview)
- Functional Consequence:
- coding_sequence_variant,upstream_transcript_variant,2KB_upstream_variant,missense_variant,3_prime_UTR_variant,genic_downstream_transcript_variant,synonymous_variant,non_coding_transcript_variant,downstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
T=0.000005/1
(GnomAD_exomes)
- HGVS:
NC_000005.10:g.140647278C>G, NC_000005.10:g.140647278C>T, NC_000005.9:g.140026863C>G, NC_000005.9:g.140026863C>T, NG_021417.1:g.5508G>C, NG_021417.1:g.5508G>A, NM_002488.5:c.186G>C, NM_002488.5:c.186G>A, NM_002488.4:c.186G>C, NM_002488.4:c.186G>A, NR_033697.2:n.353G>C, NR_033697.2:n.353G>A, NR_033697.1:n.508G>C, NR_033697.1:n.508G>A, NM_001185012.2:c.186G>C, NM_001185012.2:c.186G>A, NM_001185012.1:c.186G>C, NM_001185012.1:c.186G>A, XM_047417354.1:c.*461C>G, XM_047417354.1:c.*461C>T, NP_002479.1:p.Gln62His, NP_001171941.1:p.Gln62His
19.
rs1279926877 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 5:140647508
(GRCh38)
5:140027093
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140647507:G:C
- Gene:
- IK (Varview), NDUFA2 (Varview), TMCO6 (Varview), MIR3655 (Varview)
- Functional Consequence:
- coding_sequence_variant,upstream_transcript_variant,2KB_upstream_variant,missense_variant,3_prime_UTR_variant,genic_downstream_transcript_variant,non_coding_transcript_variant,downstream_transcript_variant
- Validated:
- by frequency
- MAF:
C=0.000004/1
(GnomAD_exomes)
- HGVS:
NC_000005.10:g.140647508G>C, NC_000005.9:g.140027093G>C, NG_021417.1:g.5278C>G, NM_002488.5:c.76C>G, NM_002488.4:c.76C>G, NR_033697.2:n.123C>G, NR_033697.1:n.278C>G, NM_001185012.2:c.76C>G, NM_001185012.1:c.76C>G, XM_047417354.1:c.*691G>C, NP_002479.1:p.Arg26Gly, NP_001171941.1:p.Arg26Gly
20.
rs1275736667 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 5:140647524
(GRCh38)
5:140027109
(GRCh37)
- Canonical SPDI:
- NC_000005.10:140647523:G:A
- Gene:
- IK (Varview), NDUFA2 (Varview), TMCO6 (Varview), MIR3655 (Varview)
- Functional Consequence:
- coding_sequence_variant,upstream_transcript_variant,2KB_upstream_variant,3_prime_UTR_variant,genic_downstream_transcript_variant,synonymous_variant,non_coding_transcript_variant,downstream_transcript_variant
- Validated:
- by frequency,by cluster
- MAF:
A=0.000004/1
(GnomAD_exomes)
A=0.000035/1
(TOMMO)
- HGVS: