SNP Links for Protein (Select 334085245) - SNP

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Links from Protein

Items: 1 to 20 of 399

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Select item 14816362081.

rs1481636208 [Homo sapiens]

Variant type:: DEL
Alleles:: AAGGT>- [Show Flanks]
Chromosome:: 11:56469926 (GRCh38)
11:56237402 (GRCh37)
Canonical SPDI:: NC_000011.10:56469925:AAGGT:
Gene:: OR5M3 (Varview)
Functional Consequence:: frameshift_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000015/4 (TOPMED)
HGVS:: NC_000011.10:g.56469926_56469930del, NC_000011.9:g.56237402_56237406del, NW_025791793.1:g.280677_280681del, NM_001004742.3:c.568_572del, NM_001004742.2:c.568_572del, NP_001004742.2:p.Thr190fs

Select item 14799434022.

rs1479943402 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 11:56469589 (GRCh38)
11:56237065 (GRCh37)
Canonical SPDI:: NC_000011.10:56469588:G:A,NC_000011.10:56469588:G:C
Gene:: OR5M3 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
A=0.000006/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.56469589G>A, NC_000011.10:g.56469589G>C, NC_000011.9:g.56237065G>A, NC_000011.9:g.56237065G>C, NW_025791793.1:g.280340G>A, NW_025791793.1:g.280340G>C, NM_001004742.3:c.909C>T, NM_001004742.3:c.909C>G, NM_001004742.2:c.909C>T, NM_001004742.2:c.909C>G, NP_001004742.2:p.Ile303Met

Select item 14751930463.

rs1475193046 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:56470112 (GRCh38)
11:56237588 (GRCh37)
Canonical SPDI:: NC_000011.10:56470111:A:G
Gene:: OR5M3 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000011.10:g.56470112A>G, NC_000011.9:g.56237588A>G, NW_025791793.1:g.280863A>G, NM_001004742.3:c.386T>C, NM_001004742.2:c.386T>C, NP_001004742.2:p.Leu129Pro

Select item 14721164534.

rs1472116453 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 11:56469606 (GRCh38)
11:56237082 (GRCh37)
Canonical SPDI:: NC_000011.10:56469605:CC:C
Gene:: OR5M3 (Varview)
Functional Consequence:: frameshift_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CC=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.56469607del, NC_000011.9:g.56237083del, NW_025791793.1:g.280358del, NM_001004742.3:c.892del, NM_001004742.2:c.892del, NP_001004742.2:p.Ala298fs

Select item 14707268515.

rs1470726851 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:56470284 (GRCh38)
11:56237760 (GRCh37)
Canonical SPDI:: NC_000011.10:56470283:A:G
Gene:: OR5M3 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (GnomAD_exomes)
G=0.000011/3 (TOPMED)
HGVS:: NC_000011.10:g.56470284A>G, NC_000011.9:g.56237760A>G, NW_025791793.1:g.281035A>G, NM_001004742.3:c.214T>C, NM_001004742.2:c.214T>C, NP_001004742.2:p.Ser72Pro

Select item 14668412576.

rs1466841257 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 11:56469702 (GRCh38)
11:56237178 (GRCh37)
Canonical SPDI:: NC_000011.10:56469701:C:G
Gene:: OR5M3 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000011.10:g.56469702C>G, NC_000011.9:g.56237178C>G, NW_025791793.1:g.280453C>G, NM_001004742.3:c.796G>C, NM_001004742.2:c.796G>C, NP_001004742.2:p.Val266Leu

Select item 14628697517.

rs1462869751 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:56470329 (GRCh38)
11:56237805 (GRCh37)
Canonical SPDI:: NC_000011.10:56470328:T:C
Gene:: OR5M3 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.56470329T>C, NC_000011.9:g.56237805T>C, NW_025791793.1:g.281080T>C, NM_001004742.3:c.169A>G, NM_001004742.2:c.169A>G, NP_001004742.2:p.Met57Val

Select item 14610600698.

rs1461060069 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:56469862 (GRCh38)
11:56237338 (GRCh37)
Canonical SPDI:: NC_000011.10:56469861:A:G
Gene:: OR5M3 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
G=0.000007/1 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000011.10:g.56469862A>G, NC_000011.9:g.56237338A>G, NW_025791793.1:g.280613A>G, NM_001004742.3:c.636T>C, NM_001004742.2:c.636T>C

Select item 14610112199.

rs1461011219 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 11:56470443 (GRCh38)
11:56237919 (GRCh37)
Canonical SPDI:: NC_000011.10:56470442:G:A,NC_000011.10:56470442:G:C
Gene:: OR5M3 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,stop_gained
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000004/1 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.56470443G>A, NC_000011.10:g.56470443G>C, NC_000011.9:g.56237919G>A, NC_000011.9:g.56237919G>C, NW_025791793.1:g.281194G>A, NW_025791793.1:g.281194G>C, NM_001004742.3:c.55C>T, NM_001004742.3:c.55C>G, NM_001004742.2:c.55C>T, NM_001004742.2:c.55C>G, NP_001004742.2:p.Arg19Ter, NP_001004742.2:p.Arg19Gly

Select item 145997957510.

rs1459979575 [Homo sapiens]

Variant type:: DEL
Alleles:: CAA>- [Show Flanks]
Chromosome:: 11:56469897 (GRCh38)
11:56237373 (GRCh37)
Canonical SPDI:: NC_000011.10:56469896:CAA:
Gene:: OR5M3 (Varview)
Functional Consequence:: coding_sequence_variant,inframe_indel
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000011/3 (TOPMED)
-=0.000021/3 (GnomAD)
HGVS:: NC_000011.10:g.56469897_56469899del, NC_000011.9:g.56237373_56237375del, NW_025791793.1:g.280648_280650del, NM_001004742.3:c.599_601del, NM_001004742.2:c.599_601del, NP_001004742.2:p.Leu200_Ala201delinsPro

Select item 145987630911.

rs1459876309 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 11:56469780 (GRCh38)
11:56237256 (GRCh37)
Canonical SPDI:: NC_000011.10:56469779:C:G,NC_000011.10:56469779:C:T
Gene:: OR5M3 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
T=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000011.10:g.56469780C>G, NC_000011.10:g.56469780C>T, NC_000011.9:g.56237256C>G, NC_000011.9:g.56237256C>T, NW_025791793.1:g.280531C>G, NW_025791793.1:g.280531C>T, NM_001004742.3:c.718G>C, NM_001004742.3:c.718G>A, NM_001004742.2:c.718G>C, NM_001004742.2:c.718G>A, NP_001004742.2:p.Gly240Arg, NP_001004742.2:p.Gly240Arg

Select item 145456397212.

rs1454563972 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:56469746 (GRCh38)
11:56237222 (GRCh37)
Canonical SPDI:: NC_000011.10:56469745:C:T
Gene:: OR5M3 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.56469746C>T, NC_000011.9:g.56237222C>T, NW_025791793.1:g.280497C>T, NM_001004742.3:c.752G>A, NM_001004742.2:c.752G>A, NP_001004742.2:p.Gly251Asp

Select item 145189617813.

rs1451896178 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:56469694 (GRCh38)
11:56237170 (GRCh37)
Canonical SPDI:: NC_000011.10:56469693:C:T
Gene:: OR5M3 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.56469694C>T, NC_000011.9:g.56237170C>T, NW_025791793.1:g.280445C>T, NM_001004742.3:c.804G>A, NM_001004742.2:c.804G>A

Select item 145087423314.

rs1450874233 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 11:56469703 (GRCh38)
11:56237179 (GRCh37)
Canonical SPDI:: NC_000011.10:56469702:A:C
Gene:: OR5M3 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.56469703A>C, NC_000011.9:g.56237179A>C, NW_025791793.1:g.280454A>C, NM_001004742.3:c.795T>G, NM_001004742.2:c.795T>G

Select item 144976818915.

rs1449768189 [Homo sapiens]

Variant type:: DELINS
Alleles:: ACAAG>- [Show Flanks]
Chromosome:: 11:56470305 (GRCh38)
11:56237781 (GRCh37)
Canonical SPDI:: NC_000011.10:56470303:GACAAG:G
Gene:: OR5M3 (Varview)
Functional Consequence:: frameshift_variant,coding_sequence_variant
Validated:: by frequency
MAF:: -=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.56470305_56470309del, NC_000011.9:g.56237781_56237785del, NW_025791793.1:g.281056_281060del, NM_001004742.3:c.190_194del, NM_001004742.2:c.190_194del, NP_001004742.2:p.Leu64fs

Select item 144405740816.

rs1444057408 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:56470273 (GRCh38)
11:56237749 (GRCh37)
Canonical SPDI:: NC_000011.10:56470272:G:A
Gene:: OR5M3 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.56470273G>A, NC_000011.9:g.56237749G>A, NW_025791793.1:g.281024G>A, NM_001004742.3:c.225C>T, NM_001004742.2:c.225C>T

Select item 144390847417.

rs1443908474 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 11:56469727 (GRCh38)
11:56237203 (GRCh37)
Canonical SPDI:: NC_000011.10:56469726:A:T
Gene:: OR5M3 (Varview)
Functional Consequence:: stop_gained,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.56469727A>T, NC_000011.9:g.56237203A>T, NW_025791793.1:g.280478A>T, NM_001004742.3:c.771T>A, NM_001004742.2:c.771T>A, NP_001004742.2:p.Tyr257Ter

Select item 144193623618.

rs1441936236 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:56469643 (GRCh38)
11:56237119 (GRCh37)
Canonical SPDI:: NC_000011.10:56469642:G:A
Gene:: OR5M3 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
HGVS:: NC_000011.10:g.56469643G>A, NC_000011.9:g.56237119G>A, NW_025791793.1:g.280394G>A, NM_001004742.3:c.855C>T, NM_001004742.2:c.855C>T

Select item 143217645819.

rs1432176458 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:56470177 (GRCh38)
11:56237653 (GRCh37)
Canonical SPDI:: NC_000011.10:56470176:A:G
Gene:: OR5M3 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: G=0.000047/1 (ALFA)
G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.56470177A>G, NC_000011.9:g.56237653A>G, NW_025791793.1:g.280928A>G, NM_001004742.3:c.321T>C, NM_001004742.2:c.321T>C

Select item 143200704320.

rs1432007043 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>- [Show Flanks]
Chromosome:: 11:56470438 (GRCh38)
11:56237914 (GRCh37)
Canonical SPDI:: NC_000011.10:56470437:TT:T
Gene:: OR5M3 (Varview)
Functional Consequence:: frameshift_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TT=0.000187/2 (ALFA)
-=0.000004/1 (GnomAD_exomes)
-=0.000007/1 (GnomAD)
-=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.56470439del, NC_000011.9:g.56237915del, NW_025791793.1:g.281190del, NM_001004742.3:c.60del, NM_001004742.2:c.60del, NP_001004742.2:p.Glu20fs