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Links from Protein

Items: 1 to 20 of 656

1.

rs1489363913 [Homo sapiens]
    Variant type:
    DELINS
    Alleles:
    ->GCCC [Show Flanks]
    Chromosome:
    17:1645684 (GRCh38)
    17:1548979 (GRCh37)
    Canonical SPDI:
    NC_000017.11:1645684:GCCC:GCCCGCCC
    Gene:
    SCARF1 (Varview), RILP (Varview)
    Functional Consequence:
    frameshift_variant,coding_sequence_variant,downstream_transcript_variant,500B_downstream_variant,non_coding_transcript_variant
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    GCCCGCCC=0./0 (ALFA)
    GCCC=0.000007/1 (GnomAD)
    HGVS:
    2.

    rs1489133707 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      G>A [Show Flanks]
      Chromosome:
      17:1643766 (GRCh38)
      17:1547060 (GRCh37)
      Canonical SPDI:
      NC_000017.11:1643765:G:A
      Gene:
      SCARF1 (Varview)
      Functional Consequence:
      non_coding_transcript_variant,coding_sequence_variant,missense_variant
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      A=0.000071/1 (ALFA)
      A=0.000007/1 (GnomAD)
      A=0.000008/2 (TOPMED)
      HGVS:
      3.

      rs1487780256 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        G>A [Show Flanks]
        Chromosome:
        17:1643543 (GRCh38)
        17:1546837 (GRCh37)
        Canonical SPDI:
        NC_000017.11:1643542:G:A
        Gene:
        SCARF1 (Varview)
        Functional Consequence:
        synonymous_variant,non_coding_transcript_variant,coding_sequence_variant
        HGVS:
        4.

        rs1486396430 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          G>A [Show Flanks]
          Chromosome:
          17:1643606 (GRCh38)
          17:1546900 (GRCh37)
          Canonical SPDI:
          NC_000017.11:1643605:G:A
          Gene:
          SCARF1 (Varview)
          Functional Consequence:
          synonymous_variant,non_coding_transcript_variant,coding_sequence_variant
          Validated:
          by frequency,by alfa,by cluster
          MAF:
          A=0./0 (ALFA)
          A=0.000007/1 (GnomAD)
          A=0.000012/1 (GnomAD_exomes)
          HGVS:
          5.

          rs1484439791 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            A>G [Show Flanks]
            Chromosome:
            17:1635530 (GRCh38)
            17:1538824 (GRCh37)
            Canonical SPDI:
            NC_000017.11:1635529:A:G
            Gene:
            SCARF1 (Varview)
            Functional Consequence:
            non_coding_transcript_variant,coding_sequence_variant,missense_variant
            Validated:
            by frequency,by alfa,by cluster
            MAF:
            G=0./0 (ALFA)
            G=0.000007/1 (GnomAD)
            HGVS:
            6.

            rs1484063219 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              G>A [Show Flanks]
              Chromosome:
              17:1637022 (GRCh38)
              17:1540316 (GRCh37)
              Canonical SPDI:
              NC_000017.11:1637021:G:A
              Gene:
              SCARF1 (Varview)
              Functional Consequence:
              stop_gained,non_coding_transcript_variant,coding_sequence_variant
              Validated:
              by frequency
              MAF:
              A=0.000004/1 (GnomAD_exomes)
              HGVS:
              7.

              rs1483016781 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                C>T [Show Flanks]
                Chromosome:
                17:1639947 (GRCh38)
                17:1543241 (GRCh37)
                Canonical SPDI:
                NC_000017.11:1639946:C:T
                Gene:
                SCARF1 (Varview)
                Functional Consequence:
                synonymous_variant,non_coding_transcript_variant,coding_sequence_variant
                Validated:
                by frequency,by alfa
                MAF:
                T=0.000071/1 (ALFA)
                T=0.000015/4 (TOPMED)
                HGVS:
                8.

                rs1482014722 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  G>A [Show Flanks]
                  Chromosome:
                  17:1639916 (GRCh38)
                  17:1543210 (GRCh37)
                  Canonical SPDI:
                  NC_000017.11:1639915:G:A
                  Gene:
                  SCARF1 (Varview)
                  Functional Consequence:
                  non_coding_transcript_variant,coding_sequence_variant,missense_variant
                  Validated:
                  by frequency,by alfa,by cluster
                  MAF:
                  A=0./0 (ALFA)
                  A=0.000007/1 (GnomAD)
                  HGVS:
                  9.

                  rs1479447138 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    G>A [Show Flanks]
                    Chromosome:
                    17:1643753 (GRCh38)
                    17:1547047 (GRCh37)
                    Canonical SPDI:
                    NC_000017.11:1643752:G:A
                    Gene:
                    SCARF1 (Varview)
                    Functional Consequence:
                    synonymous_variant,non_coding_transcript_variant,coding_sequence_variant
                    Validated:
                    by frequency,by alfa
                    MAF:
                    A=0./0 (ALFA)
                    A=0.000004/1 (TOPMED)
                    HGVS:
                    10.

                    rs1478968983 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      C>T [Show Flanks]
                      Chromosome:
                      17:1640454 (GRCh38)
                      17:1543748 (GRCh37)
                      Canonical SPDI:
                      NC_000017.11:1640453:C:T
                      Gene:
                      SCARF1 (Varview)
                      Functional Consequence:
                      non_coding_transcript_variant,coding_sequence_variant,missense_variant
                      Validated:
                      by frequency,by alfa,by cluster
                      MAF:
                      T=0./0 (ALFA)
                      T=0.000007/1 (GnomAD)
                      T=0.000023/6 (TOPMED)
                      HGVS:
                      11.

                      rs1478698423 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        A>G [Show Flanks]
                        Chromosome:
                        17:1643830 (GRCh38)
                        17:1547124 (GRCh37)
                        Canonical SPDI:
                        NC_000017.11:1643829:A:G
                        Gene:
                        SCARF1 (Varview)
                        Functional Consequence:
                        non_coding_transcript_variant,coding_sequence_variant,missense_variant
                        Validated:
                        by frequency,by alfa
                        MAF:
                        G=0./0 (ALFA)
                        HGVS:
                        13.

                        rs1476394172 [Homo sapiens]
                          Variant type:
                          SNV
                          Alleles:
                          C>T [Show Flanks]
                          Chromosome:
                          17:1636945 (GRCh38)
                          17:1540239 (GRCh37)
                          Canonical SPDI:
                          NC_000017.11:1636944:C:T
                          Gene:
                          SCARF1 (Varview)
                          Functional Consequence:
                          synonymous_variant,non_coding_transcript_variant,coding_sequence_variant
                          Validated:
                          by frequency
                          MAF:
                          T=0.000004/1 (GnomAD_exomes)
                          HGVS:
                          14.

                          rs1475421289 [Homo sapiens]
                            Variant type:
                            SNV
                            Alleles:
                            G>A [Show Flanks]
                            Chromosome:
                            17:1638882 (GRCh38)
                            17:1542176 (GRCh37)
                            Canonical SPDI:
                            NC_000017.11:1638881:G:A
                            Gene:
                            SCARF1 (Varview)
                            Functional Consequence:
                            non_coding_transcript_variant,coding_sequence_variant,missense_variant
                            Validated:
                            by frequency,by alfa,by cluster
                            MAF:
                            A=0./0 (ALFA)
                            A=0.000004/1 (TOPMED)
                            A=0.000007/1 (GnomAD)
                            HGVS:
                            16.

                            rs1474645298 [Homo sapiens]
                              Variant type:
                              SNV
                              Alleles:
                              G>A [Show Flanks]
                              Chromosome:
                              17:1643489 (GRCh38)
                              17:1546783 (GRCh37)
                              Canonical SPDI:
                              NC_000017.11:1643488:G:A
                              Gene:
                              SCARF1 (Varview)
                              Functional Consequence:
                              synonymous_variant,non_coding_transcript_variant,coding_sequence_variant
                              Validated:
                              by frequency,by alfa
                              MAF:
                              A=0./0 (ALFA)
                              A=0.000004/1 (TOPMED)
                              HGVS:
                              17.

                              rs1474354533 [Homo sapiens]
                                Variant type:
                                SNV
                                Alleles:
                                G>A [Show Flanks]
                                Chromosome:
                                17:1644834 (GRCh38)
                                17:1548128 (GRCh37)
                                Canonical SPDI:
                                NC_000017.11:1644833:G:A
                                Gene:
                                SCARF1 (Varview)
                                Functional Consequence:
                                non_coding_transcript_variant,coding_sequence_variant,missense_variant
                                Validated:
                                by frequency,by alfa
                                MAF:
                                A=0./0 (ALFA)
                                A=0.000004/1 (GnomAD_exomes)
                                HGVS:
                                18.

                                rs1473825742 [Homo sapiens]
                                  Variant type:
                                  SNV
                                  Alleles:
                                  C>T [Show Flanks]
                                  Chromosome:
                                  17:1639921 (GRCh38)
                                  17:1543215 (GRCh37)
                                  Canonical SPDI:
                                  NC_000017.11:1639920:C:T
                                  Gene:
                                  SCARF1 (Varview)
                                  Functional Consequence:
                                  stop_gained,non_coding_transcript_variant,coding_sequence_variant
                                  Validated:
                                  by frequency,by alfa,by cluster
                                  MAF:
                                  T=0./0 (ALFA)
                                  T=0.000007/1 (GnomAD)
                                  HGVS:
                                  19.
                                  20.

                                  rs1465610297 [Homo sapiens]
                                    Variant type:
                                    SNV
                                    Alleles:
                                    C>T [Show Flanks]
                                    Chromosome:
                                    17:1635574 (GRCh38)
                                    17:1538868 (GRCh37)
                                    Canonical SPDI:
                                    NC_000017.11:1635573:C:T
                                    Gene:
                                    SCARF1 (Varview)
                                    Functional Consequence:
                                    synonymous_variant,non_coding_transcript_variant,stop_gained,coding_sequence_variant
                                    Validated:
                                    by frequency,by alfa,by cluster
                                    MAF:
                                    T=0./0 (ALFA)
                                    T=0.000007/1 (GnomAD)
                                    T=0.000011/3 (TOPMED)
                                    HGVS:

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