SNP Links for Protein (Select 336455040) - SNP

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Links from Protein

Items: 1 to 20 of 226

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Select item 14854126711.

rs1485412671 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:1599783 (GRCh38)
1:1535163 (GRCh37)
Canonical SPDI:: NC_000001.11:1599782:G:A
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: intron_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.1599783G>A, NC_000001.10:g.1535163G>A, NM_001242659.2:c.233C>T, NM_001242659.1:c.233C>T, NP_001229588.1:p.Ser78Phe

Select item 14821708202.

rs1482170820 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:1599852 (GRCh38)
1:1535232 (GRCh37)
Canonical SPDI:: NC_000001.11:1599851:A:C
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.1599852A>C, NC_000001.10:g.1535232A>C, NM_001242659.2:c.164T>G, NM_001242659.1:c.164T>G, NP_001229588.1:p.Phe55Cys

Select item 14811901623.

rs1481190162 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:1599540 (GRCh38)
1:1534920 (GRCh37)
Canonical SPDI:: NC_000001.11:1599539:G:C
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.00001/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.1599540G>C, NC_000001.10:g.1534920G>C, NM_001242659.2:c.476C>G, NM_001242659.1:c.476C>G, NR_147951.1:n.108G>C, NP_001229588.1:p.Ala159Gly

Select item 14804161404.

rs1480416140 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:1599862 (GRCh38)
1:1535242 (GRCh37)
Canonical SPDI:: NC_000001.11:1599861:G:A
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000162/3 (ALFA)
A=0.000034/9 (TOPMED)
A=0.000059/8 (GnomAD)
A=0.000446/2 (Estonian)
HGVS:: NC_000001.11:g.1599862G>A, NC_000001.10:g.1535242G>A, NM_001242659.2:c.154C>T, NM_001242659.1:c.154C>T, NP_001229588.1:p.Arg52Cys

Select item 14803128735.

rs1480312873 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:1599527 (GRCh38)
1:1534907 (GRCh37)
Canonical SPDI:: NC_000001.11:1599526:C:T
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000009/1 (GnomAD_exomes)
T=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.1599527C>T, NC_000001.10:g.1534907C>T, NM_001242659.2:c.489G>A, NM_001242659.1:c.489G>A, NR_147951.1:n.95C>T

Select item 14762197796.

rs1476219779 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GCCCGCC [Show Flanks]
Chromosome:: 1:1599860 (GRCh38)
1:1535241 (GRCh37)
Canonical SPDI:: NC_000001.11:1599860:CGCCCGCCGCCCGCC:CGCCCGCCGCCCGCCGCCCGCC
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,frameshift_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CGCCCGCCGCCCGCCGCCCGCC=0./0 (ALFA)
CGCCCGC=0.000015/4 (TOPMED)
CGCCCGC=0.000022/3 (GnomAD)
HGVS:: NC_000001.11:g.1599862GCCCGCC[3], NC_000001.10:g.1535242GCCCGCC[3], NM_001242659.2:c.149_155dup, NM_001242659.1:c.149_155dup, NP_001229588.1:p.Leu53fs

Select item 14746769157.

rs1474676915 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:1599409 (GRCh38)
1:1534789 (GRCh37)
Canonical SPDI:: NC_000001.11:1599408:G:A
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: upstream_transcript_variant,coding_sequence_variant,synonymous_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: A=0.000008/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.1599409G>A, NC_000001.10:g.1534789G>A, NM_001242659.2:c.607C>T, NM_001242659.1:c.607C>T

Select item 14733810208.

rs1473381020 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:1599460 (GRCh38)
1:1534840 (GRCh37)
Canonical SPDI:: NC_000001.11:1599459:C:T
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.1599460C>T, NC_000001.10:g.1534840C>T, NM_001242659.2:c.556G>A, NM_001242659.1:c.556G>A, NR_147951.1:n.28C>T, NP_001229588.1:p.Ala186Thr

Select item 14707585249.

rs1470758524 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:1599475 (GRCh38)
1:1534855 (GRCh37)
Canonical SPDI:: NC_000001.11:1599474:G:C
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
C=0.000023/3 (GnomAD_exomes)
HGVS:: NC_000001.11:g.1599475G>C, NC_000001.10:g.1534855G>C, NM_001242659.2:c.541C>G, NM_001242659.1:c.541C>G, NR_147951.1:n.43G>C, NP_001229588.1:p.Gln181Glu

Select item 146967764310.

rs1469677643 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:1599676 (GRCh38)
1:1535056 (GRCh37)
Canonical SPDI:: NC_000001.11:1599675:C:T
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.1599676C>T, NC_000001.10:g.1535056C>T, NM_001242659.2:c.340G>A, NM_001242659.1:c.340G>A, NP_001229588.1:p.Gly114Ser

Select item 146859820911.

rs1468598209 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 1:1599709 (GRCh38)
1:1535089 (GRCh37)
Canonical SPDI:: NC_000001.11:1599708:C:G,NC_000001.11:1599708:C:T
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
G=0.000156/1 (1000Genomes)
HGVS:: NC_000001.11:g.1599709C>G, NC_000001.11:g.1599709C>T, NC_000001.10:g.1535089C>G, NC_000001.10:g.1535089C>T, NM_001242659.2:c.307G>C, NM_001242659.2:c.307G>A, NM_001242659.1:c.307G>C, NM_001242659.1:c.307G>A, NP_001229588.1:p.Val103Leu, NP_001229588.1:p.Val103Met

Select item 146814213412.

rs1468142134 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:1599665 (GRCh38)
1:1535045 (GRCh37)
Canonical SPDI:: NC_000001.11:1599664:C:A
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,intron_variant
Validated:: by cluster
HGVS:: NC_000001.11:g.1599665C>A, NC_000001.10:g.1535045C>A, NM_001242659.2:c.351G>T, NM_001242659.1:c.351G>T

Select item 146270942613.

rs1462709426 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 1:1599383 (GRCh38)
1:1534763 (GRCh37)
Canonical SPDI:: NC_000001.11:1599382:G:A,NC_000001.11:1599382:G:C
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: upstream_transcript_variant,synonymous_variant,2KB_upstream_variant,missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000008/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.1599383G>A, NC_000001.11:g.1599383G>C, NC_000001.10:g.1534763G>A, NC_000001.10:g.1534763G>C, NM_001242659.2:c.633C>T, NM_001242659.2:c.633C>G, NM_001242659.1:c.633C>T, NM_001242659.1:c.633C>G, NP_001229588.1:p.Asn211Lys

Select item 145820985814.

rs1458209858 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:1599786 (GRCh38)
1:1535166 (GRCh37)
Canonical SPDI:: NC_000001.11:1599785:C:T
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,missense_variant
HGVS:: NC_000001.11:g.1599786C>T, NC_000001.10:g.1535166C>T, NM_001242659.2:c.230G>A, NM_001242659.1:c.230G>A, NP_001229588.1:p.Arg77His

Select item 145644981415.

rs1456449814 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:1599739 (GRCh38)
1:1535119 (GRCh37)
Canonical SPDI:: NC_000001.11:1599738:A:G
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.1599739A>G, NC_000001.10:g.1535119A>G, NM_001242659.2:c.277T>C, NM_001242659.1:c.277T>C, NP_001229588.1:p.Trp93Arg

Select item 145454627916.

rs1454546279 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:1599631 (GRCh38)
1:1535011 (GRCh37)
Canonical SPDI:: NC_000001.11:1599630:A:G
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.1599631A>G, NC_000001.10:g.1535011A>G, NM_001242659.2:c.385T>C, NM_001242659.1:c.385T>C, NP_001229588.1:p.Ser129Pro

Select item 145450870317.

rs1454508703 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:1599809 (GRCh38)
1:1535189 (GRCh37)
Canonical SPDI:: NC_000001.11:1599808:G:A
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000026/7 (TOPMED)
HGVS:: NC_000001.11:g.1599809G>A, NC_000001.10:g.1535189G>A, NM_001242659.2:c.207C>T, NM_001242659.1:c.207C>T

Select item 145415685818.

rs1454156858 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 1:1599357 (GRCh38)
1:1534737 (GRCh37)
Canonical SPDI:: NC_000001.11:1599356:G:A,NC_000001.11:1599356:G:C
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
C=0.000008/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.1599357G>A, NC_000001.11:g.1599357G>C, NC_000001.10:g.1534737G>A, NC_000001.10:g.1534737G>C, NM_001242659.2:c.659C>T, NM_001242659.2:c.659C>G, NM_001242659.1:c.659C>T, NM_001242659.1:c.659C>G, NP_001229588.1:p.Pro220Leu, NP_001229588.1:p.Pro220Arg

Select item 145235160219.

rs1452351602 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 1:1599464 (GRCh38)
1:1534844 (GRCh37)
Canonical SPDI:: NC_000001.11:1599463:C:G,NC_000001.11:1599463:C:T
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: coding_sequence_variant,non_coding_transcript_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000001.11:g.1599464C>G, NC_000001.11:g.1599464C>T, NC_000001.10:g.1534844C>G, NC_000001.10:g.1534844C>T, NM_001242659.2:c.552G>C, NM_001242659.2:c.552G>A, NM_001242659.1:c.552G>C, NM_001242659.1:c.552G>A, NR_147951.1:n.32C>G, NR_147951.1:n.32C>T

Select item 144908522120.

rs1449085221 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:1599442 (GRCh38)
1:1534822 (GRCh37)
Canonical SPDI:: NC_000001.11:1599441:C:G
Gene:: FNDC10 (Varview), LOC105378586 (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.1599442C>G, NC_000001.10:g.1534822C>G, NM_001242659.2:c.574G>C, NM_001242659.1:c.574G>C, NR_147951.1:n.10C>G, NP_001229588.1:p.Gly192Arg