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Links from Protein

Items: 1 to 20 of 280

3.

rs1478182569 [Homo sapiens]
    Variant type:
    DELINS
    Alleles:
    ACG>- [Show Flanks]
    Chromosome:
    2:3644060 (GRCh38)
    2:3691650 (GRCh37)
    Canonical SPDI:
    NC_000002.12:3644056:ACGACG:ACG
    Gene:
    ALLC (Varview), COLEC11 (Varview)
    Functional Consequence:
    inframe_deletion,upstream_transcript_variant,coding_sequence_variant,non_coding_transcript_variant,2KB_upstream_variant
    Validated:
    by frequency,by cluster
    MAF:
    -=0.000007/1 (GnomAD)
    HGVS:
    NC_000002.12:g.3644057ACG[1], NC_000002.11:g.3691647ACG[1], NG_031954.1:g.54226ACG[1], NM_024027.5:c.755ACG[1], NM_024027.4:c.755ACG[1], NM_199235.3:c.746ACG[1], NM_199235.2:c.746ACG[1], NR_045659.2:n.1031ACG[1], NR_045659.1:n.1311ACG[1], NM_001255983.2:c.683ACG[1], NM_001255983.1:c.683ACG[1], NM_001255982.2:c.683ACG[1], NM_001255982.1:c.683ACG[1], NM_001255984.2:c.611ACG[1], NM_001255984.1:c.611ACG[1], NM_001255985.1:c.797ACG[1], NM_001255986.1:c.677ACG[1], NM_001255988.1:c.605ACG[1], NM_001255987.1:c.605ACG[1], NM_001255989.1:c.533ACG[1], XM_005263853.5:c.725ACG[1], XM_005263853.4:c.725ACG[1], XM_005263853.3:c.725ACG[1], XM_005263853.2:c.725ACG[1], XM_005263853.1:c.725ACG[1], XM_006711897.4:c.725ACG[1], XM_006711897.3:c.725ACG[1], XM_006711897.2:c.725ACG[1], XM_006711897.1:c.725ACG[1], NP_076932.1:p.Asp253del, NP_954705.1:p.Asp250del, NP_001242912.1:p.Asp229del, NP_001242911.1:p.Asp229del, NP_001242913.1:p.Asp205del, NP_001242914.1:p.Asp267del, NP_001242915.1:p.Asp227del, NP_001242917.1:p.Asp203del, NP_001242916.1:p.Asp203del, NP_001242918.1:p.Asp179del, XP_005263910.1:p.Asp243del, XP_006711960.1:p.Asp243del
    5.
    8.
    10.

    rs1446283337 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      G>T [Show Flanks]
      Chromosome:
      2:3604349 (GRCh38)
      2:3651939 (GRCh37)
      Canonical SPDI:
      NC_000002.12:3604348:G:T
      Gene:
      COLEC11 (Varview)
      Functional Consequence:
      non_coding_transcript_variant,synonymous_variant,genic_upstream_transcript_variant,coding_sequence_variant,5_prime_UTR_variant,upstream_transcript_variant
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      T=0./0 (ALFA)
      T=0.000008/2 (TOPMED)
      T=0.000014/2 (GnomAD)
      HGVS:
      11.

      rs1444942273 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        C>A,G [Show Flanks]
        Chromosome:
        2:3643836 (GRCh38)
        2:3691426 (GRCh37)
        Canonical SPDI:
        NC_000002.12:3643835:C:A,NC_000002.12:3643835:C:G
        Gene:
        ALLC (Varview), COLEC11 (Varview)
        Functional Consequence:
        non_coding_transcript_variant,coding_sequence_variant,missense_variant,2KB_upstream_variant,upstream_transcript_variant
        Validated:
        by frequency,by cluster
        MAF:
        G=0.000004/1 (GnomAD_exomes)
        HGVS:
        NC_000002.12:g.3643836C>A, NC_000002.12:g.3643836C>G, NC_000002.11:g.3691426C>A, NC_000002.11:g.3691426C>G, NG_031954.1:g.54005C>A, NG_031954.1:g.54005C>G, NM_024027.5:c.534C>A, NM_024027.5:c.534C>G, NM_024027.4:c.534C>A, NM_024027.4:c.534C>G, NM_199235.3:c.525C>A, NM_199235.3:c.525C>G, NM_199235.2:c.525C>A, NM_199235.2:c.525C>G, NR_045659.2:n.810C>A, NR_045659.2:n.810C>G, NR_045659.1:n.1090C>A, NR_045659.1:n.1090C>G, NM_001255983.2:c.462C>A, NM_001255983.2:c.462C>G, NM_001255983.1:c.462C>A, NM_001255983.1:c.462C>G, NM_001255982.2:c.462C>A, NM_001255982.2:c.462C>G, NM_001255982.1:c.462C>A, NM_001255982.1:c.462C>G, NM_001255984.2:c.390C>A, NM_001255984.2:c.390C>G, NM_001255984.1:c.390C>A, NM_001255984.1:c.390C>G, NM_001255985.1:c.576C>A, NM_001255985.1:c.576C>G, NM_001255986.1:c.456C>A, NM_001255986.1:c.456C>G, NM_001255988.1:c.384C>A, NM_001255988.1:c.384C>G, NM_001255987.1:c.384C>A, NM_001255987.1:c.384C>G, NM_001255989.1:c.312C>A, NM_001255989.1:c.312C>G, XM_005263853.5:c.504C>A, XM_005263853.5:c.504C>G, XM_005263853.4:c.504C>A, XM_005263853.4:c.504C>G, XM_005263853.3:c.504C>A, XM_005263853.3:c.504C>G, XM_005263853.2:c.504C>A, XM_005263853.2:c.504C>G, XM_005263853.1:c.504C>A, XM_005263853.1:c.504C>G, XM_006711897.4:c.504C>A, XM_006711897.4:c.504C>G, XM_006711897.3:c.504C>A, XM_006711897.3:c.504C>G, XM_006711897.2:c.504C>A, XM_006711897.2:c.504C>G, XM_006711897.1:c.504C>A, XM_006711897.1:c.504C>G, NP_076932.1:p.Ser178Arg, NP_076932.1:p.Ser178Arg, NP_954705.1:p.Ser175Arg, NP_954705.1:p.Ser175Arg, NP_001242912.1:p.Ser154Arg, NP_001242912.1:p.Ser154Arg, NP_001242911.1:p.Ser154Arg, NP_001242911.1:p.Ser154Arg, NP_001242913.1:p.Ser130Arg, NP_001242913.1:p.Ser130Arg, NP_001242914.1:p.Ser192Arg, NP_001242914.1:p.Ser192Arg, NP_001242915.1:p.Ser152Arg, NP_001242915.1:p.Ser152Arg, NP_001242917.1:p.Ser128Arg, NP_001242917.1:p.Ser128Arg, NP_001242916.1:p.Ser128Arg, NP_001242916.1:p.Ser128Arg, NP_001242918.1:p.Ser104Arg, NP_001242918.1:p.Ser104Arg, XP_005263910.1:p.Ser168Arg, XP_005263910.1:p.Ser168Arg, XP_006711960.1:p.Ser168Arg, XP_006711960.1:p.Ser168Arg
        16.
        17.

        rs1429066494 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          G>A,T [Show Flanks]
          Chromosome:
          2:3644064 (GRCh38)
          2:3691654 (GRCh37)
          Canonical SPDI:
          NC_000002.12:3644063:G:A,NC_000002.12:3644063:G:T
          Gene:
          ALLC (Varview), COLEC11 (Varview)
          Functional Consequence:
          synonymous_variant,2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant,coding_sequence_variant
          Validated:
          by frequency,by alfa,by cluster
          MAF:
          T=0./0 (ALFA)
          T=0.000011/3 (TOPMED)
          HGVS:
          NC_000002.12:g.3644064G>A, NC_000002.12:g.3644064G>T, NC_000002.11:g.3691654G>A, NC_000002.11:g.3691654G>T, NG_031954.1:g.54233G>A, NG_031954.1:g.54233G>T, NM_024027.5:c.762G>A, NM_024027.5:c.762G>T, NM_024027.4:c.762G>A, NM_024027.4:c.762G>T, NM_199235.3:c.753G>A, NM_199235.3:c.753G>T, NM_199235.2:c.753G>A, NM_199235.2:c.753G>T, NR_045659.2:n.1038G>A, NR_045659.2:n.1038G>T, NR_045659.1:n.1318G>A, NR_045659.1:n.1318G>T, NM_001255983.2:c.690G>A, NM_001255983.2:c.690G>T, NM_001255983.1:c.690G>A, NM_001255983.1:c.690G>T, NM_001255982.2:c.690G>A, NM_001255982.2:c.690G>T, NM_001255982.1:c.690G>A, NM_001255982.1:c.690G>T, NM_001255984.2:c.618G>A, NM_001255984.2:c.618G>T, NM_001255984.1:c.618G>A, NM_001255984.1:c.618G>T, NM_001255985.1:c.804G>A, NM_001255985.1:c.804G>T, NM_001255986.1:c.684G>A, NM_001255986.1:c.684G>T, NM_001255988.1:c.612G>A, NM_001255988.1:c.612G>T, NM_001255987.1:c.612G>A, NM_001255987.1:c.612G>T, NM_001255989.1:c.540G>A, NM_001255989.1:c.540G>T, XM_005263853.5:c.732G>A, XM_005263853.5:c.732G>T, XM_005263853.4:c.732G>A, XM_005263853.4:c.732G>T, XM_005263853.3:c.732G>A, XM_005263853.3:c.732G>T, XM_005263853.2:c.732G>A, XM_005263853.2:c.732G>T, XM_005263853.1:c.732G>A, XM_005263853.1:c.732G>T, XM_006711897.4:c.732G>A, XM_006711897.4:c.732G>T, XM_006711897.3:c.732G>A, XM_006711897.3:c.732G>T, XM_006711897.2:c.732G>A, XM_006711897.2:c.732G>T, XM_006711897.1:c.732G>A, XM_006711897.1:c.732G>T
          18.

          rs1426153875 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            C>G,T [Show Flanks]
            Chromosome:
            2:3644076 (GRCh38)
            2:3691666 (GRCh37)
            Canonical SPDI:
            NC_000002.12:3644075:C:G,NC_000002.12:3644075:C:T
            Gene:
            ALLC (Varview), COLEC11 (Varview)
            Functional Consequence:
            upstream_transcript_variant,coding_sequence_variant,2KB_upstream_variant,synonymous_variant,non_coding_transcript_variant
            Validated:
            by frequency,by alfa
            MAF:
            G=0./0 (ALFA)
            HGVS:
            NC_000002.12:g.3644076C>G, NC_000002.12:g.3644076C>T, NC_000002.11:g.3691666C>G, NC_000002.11:g.3691666C>T, NG_031954.1:g.54245C>G, NG_031954.1:g.54245C>T, NM_024027.5:c.774C>G, NM_024027.5:c.774C>T, NM_024027.4:c.774C>G, NM_024027.4:c.774C>T, NM_199235.3:c.765C>G, NM_199235.3:c.765C>T, NM_199235.2:c.765C>G, NM_199235.2:c.765C>T, NR_045659.2:n.1050C>G, NR_045659.2:n.1050C>T, NR_045659.1:n.1330C>G, NR_045659.1:n.1330C>T, NM_001255983.2:c.702C>G, NM_001255983.2:c.702C>T, NM_001255983.1:c.702C>G, NM_001255983.1:c.702C>T, NM_001255982.2:c.702C>G, NM_001255982.2:c.702C>T, NM_001255982.1:c.702C>G, NM_001255982.1:c.702C>T, NM_001255984.2:c.630C>G, NM_001255984.2:c.630C>T, NM_001255984.1:c.630C>G, NM_001255984.1:c.630C>T, NM_001255985.1:c.816C>G, NM_001255985.1:c.816C>T, NM_001255986.1:c.696C>G, NM_001255986.1:c.696C>T, NM_001255988.1:c.624C>G, NM_001255988.1:c.624C>T, NM_001255987.1:c.624C>G, NM_001255987.1:c.624C>T, NM_001255989.1:c.552C>G, NM_001255989.1:c.552C>T, XM_005263853.5:c.744C>G, XM_005263853.5:c.744C>T, XM_005263853.4:c.744C>G, XM_005263853.4:c.744C>T, XM_005263853.3:c.744C>G, XM_005263853.3:c.744C>T, XM_005263853.2:c.744C>G, XM_005263853.2:c.744C>T, XM_005263853.1:c.744C>G, XM_005263853.1:c.744C>T, XM_006711897.4:c.744C>G, XM_006711897.4:c.744C>T, XM_006711897.3:c.744C>G, XM_006711897.3:c.744C>T, XM_006711897.2:c.744C>G, XM_006711897.2:c.744C>T, XM_006711897.1:c.744C>G, XM_006711897.1:c.744C>T
            20.

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