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Links from Protein

Items: 1 to 20 of 162

1.

rs1488568002 [Homo sapiens]
    Variant type:
    DELINS
    Alleles:
    ->G [Show Flanks]
    Chromosome:
    1:244842220 (GRCh38)
    1:245005523 (GRCh37)
    Canonical SPDI:
    NC_000001.11:244842220:GG:GGG
    Gene:
    COX20 (Varview)
    Functional Consequence:
    frameshift_variant,non_coding_transcript_variant,coding_sequence_variant
    Validated:
    by frequency,by alfa
    MAF:
    GGG=0./0 (ALFA)
    G=0.000004/1 (TOPMED)
    HGVS:
    3.

    rs1477103215 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      C>T [Show Flanks]
      Chromosome:
      1:244843141 (GRCh38)
      1:245006443 (GRCh37)
      Canonical SPDI:
      NC_000001.11:244843140:C:T
      Gene:
      COX20 (Varview)
      Functional Consequence:
      non_coding_transcript_variant,3_prime_UTR_variant,coding_sequence_variant,missense_variant
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      T=0./0 (ALFA)
      T=0.000004/1 (GnomAD_exomes)
      T=0.000004/1 (TOPMED)
      HGVS:
      4.

      rs1475839618 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        G>A [Show Flanks]
        Chromosome:
        1:244835747 (GRCh38)
        1:244999049 (GRCh37)
        Canonical SPDI:
        NC_000001.11:244835746:G:A
        Gene:
        COX20 (Varview)
        Functional Consequence:
        non_coding_transcript_variant,intron_variant,coding_sequence_variant,synonymous_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        A=0./0 (ALFA)
        A=0.000007/1 (GnomAD)
        HGVS:
        5.

        rs1471915520 [Homo sapiens]
          Variant type:
          DEL
          Alleles:
          A>- [Show Flanks]
          Chromosome:
          1:244843051 (GRCh38)
          1:245006353 (GRCh37)
          Canonical SPDI:
          NC_000001.11:244843050:A:
          Gene:
          COX20 (Varview)
          Functional Consequence:
          frameshift_variant,3_prime_UTR_variant,coding_sequence_variant,non_coding_transcript_variant
          Validated:
          by frequency,by alfa,by cluster
          MAF:
          -=0./0 (ALFA)
          -=0.000004/1 (TOPMED)
          -=0.000007/1 (GnomAD)
          -=0.000156/1 (1000Genomes)
          HGVS:
          6.

          rs1456182343 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            C>T [Show Flanks]
            Chromosome:
            1:244841999 (GRCh38)
            1:245005301 (GRCh37)
            Canonical SPDI:
            NC_000001.11:244841998:C:T
            Gene:
            COX20 (Varview)
            Functional Consequence:
            coding_sequence_variant,intron_variant,missense_variant,non_coding_transcript_variant
            Clinical significance:
            pathogenic
            Validated:
            by frequency
            MAF:
            T=0.000004/1 (GnomAD_exomes)
            HGVS:
            7.

            rs1449772880 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              G>A [Show Flanks]
              Chromosome:
              1:244835726 (GRCh38)
              1:244999028 (GRCh37)
              Canonical SPDI:
              NC_000001.11:244835725:G:A
              Gene:
              COX20 (Varview)
              Functional Consequence:
              non_coding_transcript_variant,coding_sequence_variant,synonymous_variant
              HGVS:
              9.

              rs1443230810 [Homo sapiens]
                Variant type:
                DELINS
                Alleles:
                G>- [Show Flanks]
                Chromosome:
                1:244843126 (GRCh38)
                1:245006428 (GRCh37)
                Canonical SPDI:
                NC_000001.11:244843125:GG:G
                Gene:
                COX20 (Varview)
                Functional Consequence:
                non_coding_transcript_variant,coding_sequence_variant,frameshift_variant,3_prime_UTR_variant
                Validated:
                by frequency
                MAF:
                -=0.000004/1 (GnomAD_exomes)
                HGVS:
                10.

                rs1438738278 [Homo sapiens]
                  Variant type:
                  DELINS
                  Alleles:
                  ->GATC [Show Flanks]
                  Chromosome:
                  1:244843135 (GRCh38)
                  1:245006438 (GRCh37)
                  Canonical SPDI:
                  NC_000001.11:244843135:TCGATC:TCGATCGATC
                  Gene:
                  COX20 (Varview)
                  Functional Consequence:
                  coding_sequence_variant,frameshift_variant,non_coding_transcript_variant,3_prime_UTR_variant
                  Validated:
                  by frequency,by alfa,by cluster
                  MAF:
                  TCGATCGATC=0./0 (ALFA)
                  TCGA=0.000014/2 (GnomAD)
                  HGVS:
                  11.
                  12.

                  rs1429922885 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    C>T [Show Flanks]
                    Chromosome:
                    1:244841985 (GRCh38)
                    1:245005287 (GRCh37)
                    Canonical SPDI:
                    NC_000001.11:244841984:C:T
                    Gene:
                    COX20 (Varview)
                    Functional Consequence:
                    non_coding_transcript_variant,synonymous_variant,intron_variant,coding_sequence_variant
                    Validated:
                    by frequency,by alfa,by cluster
                    MAF:
                    T=0./0 (ALFA)
                    T=0.000007/1 (GnomAD)
                    T=0.000011/3 (TOPMED)
                    HGVS:
                    13.

                    rs1427436443 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      G>A [Show Flanks]
                      Chromosome:
                      1:244842228 (GRCh38)
                      1:245005530 (GRCh37)
                      Canonical SPDI:
                      NC_000001.11:244842227:G:A
                      Gene:
                      COX20 (Varview)
                      Functional Consequence:
                      non_coding_transcript_variant,3_prime_UTR_variant,missense_variant,coding_sequence_variant
                      Validated:
                      by frequency
                      MAF:
                      A=0.000004/1 (GnomAD_exomes)
                      HGVS:
                      14.

                      rs1421707612 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        T>C [Show Flanks]
                        Chromosome:
                        1:244842239 (GRCh38)
                        1:245005541 (GRCh37)
                        Canonical SPDI:
                        NC_000001.11:244842238:T:C
                        Gene:
                        COX20 (Varview)
                        Functional Consequence:
                        coding_sequence_variant,3_prime_UTR_variant,synonymous_variant,non_coding_transcript_variant
                        Validated:
                        by frequency,by cluster
                        MAF:
                        C=0.000004/1 (GnomAD_exomes)
                        HGVS:
                        15.

                        rs1415886918 [Homo sapiens]
                          Variant type:
                          DELINS
                          Alleles:
                          CA>- [Show Flanks]
                          Chromosome:
                          1:244843155 (GRCh38)
                          1:245006457 (GRCh37)
                          Canonical SPDI:
                          NC_000001.11:244843151:ACACA:ACA
                          Gene:
                          COX20 (Varview)
                          Functional Consequence:
                          non_coding_transcript_variant,frameshift_variant,coding_sequence_variant,3_prime_UTR_variant
                          Validated:
                          by frequency,by alfa,by cluster
                          MAF:
                          ACA=0./0 (ALFA)
                          -=0.000005/1 (GnomAD_exomes)
                          -=0.000011/3 (TOPMED)
                          HGVS:
                          16.

                          rs1405234816 [Homo sapiens]
                            Variant type:
                            SNV
                            Alleles:
                            G>A [Show Flanks]
                            Chromosome:
                            1:244835752 (GRCh38)
                            1:244999054 (GRCh37)
                            Canonical SPDI:
                            NC_000001.11:244835751:G:A
                            Gene:
                            COX20 (Varview)
                            Functional Consequence:
                            coding_sequence_variant,missense_variant,non_coding_transcript_variant,intron_variant
                            Validated:
                            by frequency,by alfa
                            MAF:
                            A=0./0 (ALFA)
                            A=0.000004/1 (TOPMED)
                            HGVS:
                            17.

                            rs1405043496 [Homo sapiens]
                              Variant type:
                              SNV
                              Alleles:
                              T>C [Show Flanks]
                              Chromosome:
                              1:244841970 (GRCh38)
                              1:245005272 (GRCh37)
                              Canonical SPDI:
                              NC_000001.11:244841969:T:C
                              Gene:
                              COX20 (Varview)
                              Functional Consequence:
                              coding_sequence_variant,synonymous_variant,non_coding_transcript_variant,intron_variant
                              Validated:
                              by frequency,by alfa
                              MAF:
                              C=0./0 (ALFA)
                              C=0.000008/2 (TOPMED)
                              HGVS:
                              18.

                              rs1400975011 [Homo sapiens]
                                Variant type:
                                SNV
                                Alleles:
                                G>A [Show Flanks]
                                Chromosome:
                                1:244842051 (GRCh38)
                                1:245005353 (GRCh37)
                                Canonical SPDI:
                                NC_000001.11:244842050:G:A
                                Gene:
                                COX20 (Varview)
                                Functional Consequence:
                                intron_variant,coding_sequence_variant,non_coding_transcript_variant,synonymous_variant
                                Validated:
                                by frequency,by alfa,by cluster
                                MAF:
                                A=0./0 (ALFA)
                                HGVS:
                                20.

                                rs1381115775 [Homo sapiens]
                                  Variant type:
                                  SNV
                                  Alleles:
                                  C>T [Show Flanks]
                                  Chromosome:
                                  1:244842238 (GRCh38)
                                  1:245005540 (GRCh37)
                                  Canonical SPDI:
                                  NC_000001.11:244842237:C:T
                                  Gene:
                                  COX20 (Varview)
                                  Functional Consequence:
                                  non_coding_transcript_variant,3_prime_UTR_variant,coding_sequence_variant,synonymous_variant
                                  Validated:
                                  by frequency,by alfa,by cluster
                                  MAF:
                                  T=0./0 (ALFA)
                                  T=0.000004/1 (GnomAD_exomes)
                                  T=0.000004/1 (TOPMED)
                                  HGVS:

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