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Links from Protein

Items: 1 to 20 of 413

1.

rs1489735442 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    C>T [Show Flanks]
    Chromosome:
    17:15999933 (GRCh38)
    17:15903247 (GRCh37)
    Canonical SPDI:
    NC_000017.11:15999932:C:T
    Gene:
    TTC19 (Varview), ZSWIM7 (Varview)
    Functional Consequence:
    coding_sequence_variant,2KB_upstream_variant,5_prime_UTR_variant,missense_variant,upstream_transcript_variant
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    T=0.000071/1 (ALFA)
    T=0.000015/4 (TOPMED)
    T=0.000029/4 (GnomAD)
    HGVS:
    2.

    rs1486440690 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      C>T [Show Flanks]
      Chromosome:
      17:16000131 (GRCh38)
      17:15903445 (GRCh37)
      Canonical SPDI:
      NC_000017.11:16000130:C:T
      Gene:
      TTC19 (Varview), ZSWIM7 (Varview)
      Functional Consequence:
      coding_sequence_variant,2KB_upstream_variant,5_prime_UTR_variant,synonymous_variant,upstream_transcript_variant
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      T=0./0 (ALFA)
      T=0.000004/1 (TOPMED)
      T=0.000007/1 (GnomAD)
      T=0.000011/2 (GnomAD_exomes)
      HGVS:
      3.

      rs1483019285 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        G>A [Show Flanks]
        Chromosome:
        17:16027377 (GRCh38)
        17:15930691 (GRCh37)
        Canonical SPDI:
        NC_000017.11:16027376:G:A
        Gene:
        TTC19 (Varview)
        Functional Consequence:
        genic_downstream_transcript_variant,coding_sequence_variant,missense_variant,intron_variant
        Clinical significance:
        uncertain-significance
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        A=0./0 (ALFA)
        A=0.000008/2 (GnomAD_exomes)
        A=0.000015/4 (TOPMED)
        A=0.000029/4 (GnomAD)
        A=0.000071/2 (TOMMO)
        HGVS:
        4.

        rs1482892651 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          A>C [Show Flanks]
          Chromosome:
          17:16027487 (GRCh38)
          17:15930801 (GRCh37)
          Canonical SPDI:
          NC_000017.11:16027486:A:C
          Gene:
          TTC19 (Varview)
          Functional Consequence:
          genic_downstream_transcript_variant,coding_sequence_variant,missense_variant,intron_variant
          Validated:
          by frequency,by alfa
          MAF:
          C=0./0 (ALFA)
          C=0.000011/3 (TOPMED)
          HGVS:
          5.
          6.

          rs1479684287 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            T>C [Show Flanks]
            Chromosome:
            17:15999867 (GRCh38)
            17:15903181 (GRCh37)
            Canonical SPDI:
            NC_000017.11:15999866:T:C
            Gene:
            TTC19 (Varview), ZSWIM7 (Varview)
            Functional Consequence:
            coding_sequence_variant,2KB_upstream_variant,5_prime_UTR_variant,missense_variant,upstream_transcript_variant
            Validated:
            by frequency,by alfa,by cluster
            MAF:
            C=0./0 (ALFA)
            C=0.000004/1 (TOPMED)
            C=0.000007/1 (GnomAD)
            C=0.000011/1 (GnomAD_exomes)
            HGVS:
            7.

            rs1474092285 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              A>C [Show Flanks]
              Chromosome:
              17:16000010 (GRCh38)
              17:15903324 (GRCh37)
              Canonical SPDI:
              NC_000017.11:16000009:A:C
              Gene:
              TTC19 (Varview), ZSWIM7 (Varview)
              Functional Consequence:
              coding_sequence_variant,2KB_upstream_variant,5_prime_UTR_variant,synonymous_variant,upstream_transcript_variant
              Validated:
              by frequency,by alfa
              MAF:
              C=0./0 (ALFA)
              C=0.000011/3 (TOPMED)
              HGVS:
              9.
              10.

              rs1462593526 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                A>G [Show Flanks]
                Chromosome:
                17:15999970 (GRCh38)
                17:15903284 (GRCh37)
                Canonical SPDI:
                NC_000017.11:15999969:A:G
                Gene:
                TTC19 (Varview), ZSWIM7 (Varview)
                Functional Consequence:
                5_prime_UTR_variant,upstream_transcript_variant,missense_variant,2KB_upstream_variant,coding_sequence_variant
                Clinical significance:
                uncertain-significance,likely-benign
                Validated:
                by frequency,by alfa,by cluster
                MAF:
                G=0.001853/35 (ALFA)
                G=0.000132/35 (TOPMED)
                G=0.000625/4 (1000Genomes)
                G=0.001198/167 (GnomAD)
                G=0.007812/35 (Estonian)
                HGVS:
                11.

                rs1462476909 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  G>T [Show Flanks]
                  Chromosome:
                  17:15999957 (GRCh38)
                  17:15903271 (GRCh37)
                  Canonical SPDI:
                  NC_000017.11:15999956:G:T
                  Gene:
                  TTC19 (Varview), ZSWIM7 (Varview)
                  Functional Consequence:
                  5_prime_UTR_variant,upstream_transcript_variant,missense_variant,2KB_upstream_variant,coding_sequence_variant
                  Validated:
                  by frequency,by alfa
                  MAF:
                  T=0./0 (ALFA)
                  HGVS:
                  12.

                  rs1460960356 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    C>T [Show Flanks]
                    Chromosome:
                    17:16000142 (GRCh38)
                    17:15903456 (GRCh37)
                    Canonical SPDI:
                    NC_000017.11:16000141:C:T
                    Gene:
                    TTC19 (Varview), ZSWIM7 (Varview)
                    Functional Consequence:
                    5_prime_UTR_variant,upstream_transcript_variant,missense_variant,2KB_upstream_variant,coding_sequence_variant
                    Validated:
                    by frequency
                    MAF:
                    T=0.000005/1 (GnomAD_exomes)
                    HGVS:
                    13.

                    rs1459754053 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      A>C [Show Flanks]
                      Chromosome:
                      17:16027455 (GRCh38)
                      17:15930769 (GRCh37)
                      Canonical SPDI:
                      NC_000017.11:16027454:A:C
                      Gene:
                      TTC19 (Varview)
                      Functional Consequence:
                      genic_downstream_transcript_variant,intron_variant,missense_variant,coding_sequence_variant
                      Validated:
                      by frequency,by alfa
                      MAF:
                      C=0./0 (ALFA)
                      C=0.000004/1 (TOPMED)
                      HGVS:
                      14.

                      rs1458435124 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        G>A [Show Flanks]
                        Chromosome:
                        17:16026586 (GRCh38)
                        17:15929900 (GRCh37)
                        Canonical SPDI:
                        NC_000017.11:16026585:G:A
                        Gene:
                        TTC19 (Varview)
                        Functional Consequence:
                        genic_downstream_transcript_variant,missense_variant,coding_sequence_variant
                        Validated:
                        by frequency,by alfa,by cluster
                        MAF:
                        A=0.000043/1 (ALFA)
                        A=0.000004/1 (GnomAD_exomes)
                        A=0.000004/1 (TOPMED)
                        HGVS:
                        15.

                        rs1457412289 [Homo sapiens]
                          Variant type:
                          SNV
                          Alleles:
                          T>C [Show Flanks]
                          Chromosome:
                          17:16025120 (GRCh38)
                          17:15928434 (GRCh37)
                          Canonical SPDI:
                          NC_000017.11:16025119:T:C
                          Gene:
                          TTC19 (Varview)
                          Functional Consequence:
                          genic_downstream_transcript_variant,synonymous_variant,coding_sequence_variant
                          Validated:
                          by frequency
                          MAF:
                          C=0.000004/1 (GnomAD_exomes)
                          HGVS:
                          17.

                          rs1455754992 [Homo sapiens]
                            Variant type:
                            DELINS
                            Alleles:
                            GAAAAGTAGACCTTTGACAAA>- [Show Flanks]
                            Chromosome:
                            17:16027486 (GRCh38)
                            17:15930800 (GRCh37)
                            Canonical SPDI:
                            NC_000017.11:16027481:CAAAGAAAAGTAGACCTTTGACAAA:CAAA
                            Gene:
                            TTC19 (Varview)
                            Functional Consequence:
                            genic_downstream_transcript_variant,inframe_deletion,intron_variant,coding_sequence_variant
                            Validated:
                            by frequency
                            MAF:
                            -=0.000004/1 (GnomAD_exomes)
                            HGVS:
                            18.
                            19.

                            rs1449887634 [Homo sapiens]
                              Variant type:
                              SNV
                              Alleles:
                              G>A [Show Flanks]
                              Chromosome:
                              17:16027475 (GRCh38)
                              17:15930789 (GRCh37)
                              Canonical SPDI:
                              NC_000017.11:16027474:G:A
                              Gene:
                              TTC19 (Varview)
                              Functional Consequence:
                              genic_downstream_transcript_variant,intron_variant,missense_variant,coding_sequence_variant
                              Validated:
                              by frequency
                              MAF:
                              A=0.000004/1 (GnomAD_exomes)
                              HGVS:
                              20.

                              rs1442725062 [Homo sapiens]
                                Variant type:
                                SNV
                                Alleles:
                                A>G [Show Flanks]
                                Chromosome:
                                17:16027521 (GRCh38)
                                17:15930835 (GRCh37)
                                Canonical SPDI:
                                NC_000017.11:16027520:A:G
                                Gene:
                                TTC19 (Varview)
                                Functional Consequence:
                                genic_downstream_transcript_variant,intron_variant,synonymous_variant,terminator_codon_variant
                                Validated:
                                by frequency,by alfa
                                MAF:
                                G=0.000047/1 (ALFA)
                                G=0.000004/1 (GnomAD_exomes)
                                HGVS:

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