SNP Links for Protein (Select 4507575) - SNP

Links from Protein

Items: 1 to 20 of 480

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Select item 14909363621.

rs1490936362 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:6329581 (GRCh38)
12:6438747 (GRCh37)
Canonical SPDI:: NC_000012.12:6329580:G:A
Gene:: TNFRSF1A (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,missense_variant
Clinical significance:: uncertain-significance
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.6329581G>A, NC_000012.11:g.6438747G>A, NG_007506.1:g.17515C>T, NM_001065.4:c.1099C>T, NM_001065.3:c.1099C>T, NM_001346092.2:c.640C>T, NM_001346092.1:c.640C>T, NR_144351.2:n.1287C>T, NR_144351.1:n.1328C>T, NM_001346091.2:c.775C>T, NM_001346091.1:c.775C>T, NP_001056.1:p.Pro367Ser, NP_001333021.1:p.Pro214Ser, NP_001333020.1:p.Pro259Ser

Select item 14904427972.

rs1490442797 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 12:6329877 (GRCh38)
12:6439043 (GRCh37)
Canonical SPDI:: NC_000012.12:6329876:C:T
Gene:: TNFRSF1A (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000012.12:g.6329877C>T, NC_000012.11:g.6439043C>T, NG_007506.1:g.17219G>A, NM_001065.4:c.958G>A, NM_001065.3:c.958G>A, NM_001346092.2:c.499G>A, NM_001346092.1:c.499G>A, NR_144351.2:n.1146G>A, NR_144351.1:n.1187G>A, NM_001346091.2:c.634G>A, NM_001346091.1:c.634G>A, NP_001056.1:p.Gly320Arg, NP_001333021.1:p.Gly167Arg, NP_001333020.1:p.Gly212Arg

Select item 14900646013.

rs1490064601 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:6329577 (GRCh38)
12:6438743 (GRCh37)
Canonical SPDI:: NC_000012.12:6329576:G:A
Gene:: TNFRSF1A (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,missense_variant
HGVS:: NC_000012.12:g.6329577G>A, NC_000012.11:g.6438743G>A, NG_007506.1:g.17519C>T, NM_001065.4:c.1103C>T, NM_001065.3:c.1103C>T, NM_001346092.2:c.644C>T, NM_001346092.1:c.644C>T, NR_144351.2:n.1291C>T, NR_144351.1:n.1332C>T, NM_001346091.2:c.779C>T, NM_001346091.1:c.779C>T, NP_001056.1:p.Pro368Leu, NP_001333021.1:p.Pro215Leu, NP_001333020.1:p.Pro260Leu

Select item 14876422064.

rs1487642206 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 12:6329385 (GRCh38)
12:6438551 (GRCh37)
Canonical SPDI:: NC_000012.12:6329384:C:A
Gene:: TNFRSF1A (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.6329385C>A, NC_000012.11:g.6438551C>A, NG_007506.1:g.17711G>T, NM_001065.4:c.1295G>T, NM_001065.3:c.1295G>T, NM_001346092.2:c.836G>T, NM_001346092.1:c.836G>T, NR_144351.2:n.1483G>T, NR_144351.1:n.1524G>T, NM_001346091.2:c.971G>T, NM_001346091.1:c.971G>T, NP_001056.1:p.Gly432Val, NP_001333021.1:p.Gly279Val, NP_001333020.1:p.Gly324Val

Select item 14841256255.

rs1484125625 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:6329868 (GRCh38)
12:6439034 (GRCh37)
Canonical SPDI:: NC_000012.12:6329867:G:A
Gene:: TNFRSF1A (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: A=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000012.12:g.6329868G>A, NC_000012.11:g.6439034G>A, NG_007506.1:g.17228C>T, NM_001065.4:c.967C>T, NM_001065.3:c.967C>T, NM_001346092.2:c.508C>T, NM_001346092.1:c.508C>T, NR_144351.2:n.1155C>T, NR_144351.1:n.1196C>T, NM_001346091.2:c.643C>T, NM_001346091.1:c.643C>T, NP_001056.1:p.Pro323Ser, NP_001333021.1:p.Pro170Ser, NP_001333020.1:p.Pro215Ser

Select item 14820793036.

rs1482079303 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 12:6333448 (GRCh38)
12:6442614 (GRCh37)
Canonical SPDI:: NC_000012.12:6333447:G:C
Gene:: TNFRSF1A (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,non_coding_transcript_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
C=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.6333448G>C, NC_000012.11:g.6442614G>C, NG_007506.1:g.13648C>G, NM_001065.4:c.391C>G, NM_001065.3:c.391C>G, NM_001346092.2:c.-187C>G, NM_001346092.1:c.-187C>G, NR_144351.2:n.653C>G, NR_144351.1:n.694C>G, NM_001346091.2:c.67C>G, NM_001346091.1:c.67C>G, NP_001056.1:p.Gln131Glu, NP_001333020.1:p.Gln23Glu

Select item 14766651497.

rs1476665149 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 12:6330041 (GRCh38)
12:6439207 (GRCh37)
Canonical SPDI:: NC_000012.12:6330040:T:A
Gene:: TNFRSF1A (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: A=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.6330041T>A, NC_000012.11:g.6439207T>A, NG_007506.1:g.17055A>T, NM_001065.4:c.794A>T, NM_001065.3:c.794A>T, NM_001346092.2:c.335A>T, NM_001346092.1:c.335A>T, NR_144351.2:n.982A>T, NR_144351.1:n.1023A>T, NM_001346091.2:c.470A>T, NM_001346091.1:c.470A>T, NP_001056.1:p.Lys265Met, NP_001333021.1:p.Lys112Met, NP_001333020.1:p.Lys157Met

Select item 14756179088.

rs1475617908 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:6333861 (GRCh38)
12:6443027 (GRCh37)
Canonical SPDI:: NC_000012.12:6333860:G:A
Gene:: TNFRSF1A (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,non_coding_transcript_variant,5_prime_UTR_variant
HGVS:: NC_000012.12:g.6333861G>A, NC_000012.11:g.6443027G>A, NG_007506.1:g.13235C>T, NM_001065.4:c.198C>T, NM_001065.3:c.198C>T, NM_001346092.2:c.-380C>T, NM_001346092.1:c.-380C>T, NR_144351.2:n.460C>T, NR_144351.1:n.501C>T, NM_001346091.2:c.-127C>T, NM_001346091.1:c.-127C>T

Select item 14735472169.

rs1473547216 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:6330011 (GRCh38)
12:6439177 (GRCh37)
Canonical SPDI:: NC_000012.12:6330010:G:A
Gene:: TNFRSF1A (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,non_coding_transcript_variant
Clinical significance:: uncertain-significance
HGVS:: NC_000012.12:g.6330011G>A, NC_000012.11:g.6439177G>A, NG_007506.1:g.17085C>T, NM_001065.4:c.824C>T, NM_001065.3:c.824C>T, NM_001346092.2:c.365C>T, NM_001346092.1:c.365C>T, NR_144351.2:n.1012C>T, NR_144351.1:n.1053C>T, NM_001346091.2:c.500C>T, NM_001346091.1:c.500C>T, NP_001056.1:p.Pro275Leu, NP_001333021.1:p.Pro122Leu, NP_001333020.1:p.Pro167Leu

Select item 147164287710.

rs1471642877 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 12:6334196 (GRCh38)
12:6443362 (GRCh37)
Canonical SPDI:: NC_000012.12:6334195:G:C,NC_000012.12:6334195:G:T
Gene:: TNFRSF1A (Varview)
Functional Consequence:: missense_variant,intron_variant,non_coding_transcript_variant,coding_sequence_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.6334196G>C, NC_000012.12:g.6334196G>T, NC_000012.11:g.6443362G>C, NC_000012.11:g.6443362G>T, NG_007506.1:g.12900C>G, NG_007506.1:g.12900C>A, NM_001065.4:c.88C>G, NM_001065.4:c.88C>A, NM_001065.3:c.88C>G, NM_001065.3:c.88C>A, NM_001346092.2:c.-490C>G, NM_001346092.2:c.-490C>A, NM_001346092.1:c.-490C>G, NM_001346092.1:c.-490C>A, NR_144351.2:n.350C>G, NR_144351.2:n.350C>A, NR_144351.1:n.391C>G, NR_144351.1:n.391C>A, NP_001056.1:p.Leu30Val, NP_001056.1:p.Leu30Met

Select item 146991286811.

rs1469912868 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:6333840 (GRCh38)
12:6443006 (GRCh37)
Canonical SPDI:: NC_000012.12:6333839:T:C
Gene:: TNFRSF1A (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,non_coding_transcript_variant,5_prime_UTR_variant
Clinical significance:: benign
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000012.12:g.6333840T>C, NC_000012.11:g.6443006T>C, NG_007506.1:g.13256A>G, NM_001065.4:c.219A>G, NM_001065.3:c.219A>G, NM_001346092.2:c.-359A>G, NM_001346092.1:c.-359A>G, NR_144351.2:n.481A>G, NR_144351.1:n.522A>G, NM_001346091.2:c.-106A>G, NM_001346091.1:c.-106A>G

Select item 146965565912.

rs1469655659 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 12:6334178 (GRCh38)
12:6443344 (GRCh37)
Canonical SPDI:: NC_000012.12:6334177:C:G,NC_000012.12:6334177:C:T
Gene:: TNFRSF1A (Varview)
Functional Consequence:: missense_variant,intron_variant,non_coding_transcript_variant,coding_sequence_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000012.12:g.6334178C>G, NC_000012.12:g.6334178C>T, NC_000012.11:g.6443344C>G, NC_000012.11:g.6443344C>T, NG_007506.1:g.12918G>C, NG_007506.1:g.12918G>A, NM_001065.4:c.106G>C, NM_001065.4:c.106G>A, NM_001065.3:c.106G>C, NM_001065.3:c.106G>A, NM_001346092.2:c.-472G>C, NM_001346092.2:c.-472G>A, NM_001346092.1:c.-472G>C, NM_001346092.1:c.-472G>A, NR_144351.2:n.368G>C, NR_144351.2:n.368G>A, NR_144351.1:n.409G>C, NR_144351.1:n.409G>A, NP_001056.1:p.Asp36His, NP_001056.1:p.Asp36Asn

Select item 146959900313.

rs1469599003 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 12:6334202 (GRCh38)
12:6443368 (GRCh37)
Canonical SPDI:: NC_000012.12:6334201:T:A
Gene:: TNFRSF1A (Varview)
Functional Consequence:: missense_variant,intron_variant,non_coding_transcript_variant,coding_sequence_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.6334202T>A, NC_000012.11:g.6443368T>A, NG_007506.1:g.12894A>T, NM_001065.4:c.82A>T, NM_001065.3:c.82A>T, NM_001346092.2:c.-496A>T, NM_001346092.1:c.-496A>T, NR_144351.2:n.344A>T, NR_144351.1:n.385A>T, NP_001056.1:p.Ile28Phe

Select item 146853259014.

rs1468532590 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 12:6329466 (GRCh38)
12:6438632 (GRCh37)
Canonical SPDI:: NC_000012.12:6329465:G:C,NC_000012.12:6329465:G:T
Gene:: TNFRSF1A (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
C=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000012.12:g.6329466G>C, NC_000012.12:g.6329466G>T, NC_000012.11:g.6438632G>C, NC_000012.11:g.6438632G>T, NG_007506.1:g.17630C>G, NG_007506.1:g.17630C>A, NM_001065.4:c.1214C>G, NM_001065.4:c.1214C>A, NM_001065.3:c.1214C>G, NM_001065.3:c.1214C>A, NM_001346092.2:c.755C>G, NM_001346092.2:c.755C>A, NM_001346092.1:c.755C>G, NM_001346092.1:c.755C>A, NR_144351.2:n.1402C>G, NR_144351.2:n.1402C>A, NR_144351.1:n.1443C>G, NR_144351.1:n.1443C>A, NM_001346091.2:c.890C>G, NM_001346091.2:c.890C>A, NM_001346091.1:c.890C>G, NM_001346091.1:c.890C>A, NP_001056.1:p.Ala405Gly, NP_001056.1:p.Ala405Glu, NP_001333021.1:p.Ala252Gly, NP_001333021.1:p.Ala252Glu, NP_001333020.1:p.Ala297Gly, NP_001333020.1:p.Ala297Glu

Select item 146412859315.

rs1464128593 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:6333373 (GRCh38)
12:6442539 (GRCh37)
Canonical SPDI:: NC_000012.12:6333372:G:A
Gene:: TNFRSF1A (Varview)
Functional Consequence:: coding_sequence_variant,5_prime_UTR_variant,missense_variant,non_coding_transcript_variant
HGVS:: NC_000012.12:g.6333373G>A, NC_000012.11:g.6442539G>A, NG_007506.1:g.13723C>T, NM_001065.4:c.466C>T, NM_001065.3:c.466C>T, NM_001346092.2:c.-112C>T, NM_001346092.1:c.-112C>T, NR_144351.2:n.728C>T, NR_144351.1:n.769C>T, NM_001346091.2:c.142C>T, NM_001346091.1:c.142C>T, NP_001056.1:p.Leu156Phe, NP_001333020.1:p.Leu48Phe

Select item 146357294516.

rs1463572945 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:6329829 (GRCh38)
12:6438995 (GRCh37)
Canonical SPDI:: NC_000012.12:6329828:T:C
Gene:: TNFRSF1A (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000021/3 (GnomAD)
HGVS:: NC_000012.12:g.6329829T>C, NC_000012.11:g.6438995T>C, NG_007506.1:g.17267A>G, NM_001065.4:c.1006A>G, NM_001065.3:c.1006A>G, NM_001346092.2:c.547A>G, NM_001346092.1:c.547A>G, NR_144351.2:n.1194A>G, NR_144351.1:n.1235A>G, NM_001346091.2:c.682A>G, NM_001346091.1:c.682A>G, NP_001056.1:p.Asn336Asp, NP_001333021.1:p.Asn183Asp, NP_001333020.1:p.Asn228Asp

Select item 146350334517.

rs1463503345 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 12:6330904 (GRCh38)
12:6440070 (GRCh37)
Canonical SPDI:: NC_000012.12:6330903:T:A
Gene:: TNFRSF1A (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.6330904T>A, NC_000012.11:g.6440070T>A, NG_007506.1:g.16192A>T, NM_001065.4:c.574A>T, NM_001065.3:c.574A>T, NM_001346092.2:c.115A>T, NM_001346092.1:c.115A>T, NM_001346091.2:c.250A>T, NM_001346091.1:c.250A>T, NP_001056.1:p.Thr192Ser, NP_001333021.1:p.Thr39Ser, NP_001333020.1:p.Thr84Ser

Select item 146102163418.

rs1461021634 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:6329845 (GRCh38)
12:6439011 (GRCh37)
Canonical SPDI:: NC_000012.12:6329844:G:A
Gene:: TNFRSF1A (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.6329845G>A, NC_000012.11:g.6439011G>A, NG_007506.1:g.17251C>T, NM_001065.4:c.990C>T, NM_001065.3:c.990C>T, NM_001346092.2:c.531C>T, NM_001346092.1:c.531C>T, NR_144351.2:n.1178C>T, NR_144351.1:n.1219C>T, NM_001346091.2:c.666C>T, NM_001346091.1:c.666C>T

Select item 146071841519.

rs1460718415 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:6330705 (GRCh38)
12:6439871 (GRCh37)
Canonical SPDI:: NC_000012.12:6330704:G:A
Gene:: TNFRSF1A (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.6330705G>A, NC_000012.11:g.6439871G>A, NG_007506.1:g.16391C>T, NM_001065.4:c.632C>T, NM_001065.3:c.632C>T, NM_001346092.2:c.173C>T, NM_001346092.1:c.173C>T, NR_144351.2:n.820C>T, NR_144351.1:n.861C>T, NM_001346091.2:c.308C>T, NM_001346091.1:c.308C>T, NP_001056.1:p.Thr211Ile, NP_001333021.1:p.Thr58Ile, NP_001333020.1:p.Thr103Ile

Select item 145957392020.

rs1459573920 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 12:6330924 (GRCh38)
12:6440090 (GRCh37)
Canonical SPDI:: NC_000012.12:6330923:C:A
Gene:: TNFRSF1A (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
HGVS:: NC_000012.12:g.6330924C>A, NC_000012.11:g.6440090C>A, NG_007506.1:g.16172G>T, NM_001065.4:c.554G>T, NM_001065.3:c.554G>T, NM_001346092.2:c.95G>T, NM_001346092.1:c.95G>T, NM_001346091.2:c.230G>T, NM_001346091.1:c.230G>T, NP_001056.1:p.Cys185Phe, NP_001333021.1:p.Cys32Phe, NP_001333020.1:p.Cys77Phe

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