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Links from Protein

Items: 1 to 20 of 155

2.

rs1488945109 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    C>T [Show Flanks]
    Chromosome:
    16:399447 (GRCh38)
    16:449447 (GRCh37)
    Canonical SPDI:
    NC_000016.10:399446:C:T
    Gene:
    NME4 (Varview)
    Functional Consequence:
    coding_sequence_variant,intron_variant,synonymous_variant
    Validated:
    by frequency,by cluster
    MAF:
    T=0.000007/1 (GnomAD)
    HGVS:
    3.

    rs1467252277 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      C>T [Show Flanks]
      Chromosome:
      16:399432 (GRCh38)
      16:449432 (GRCh37)
      Canonical SPDI:
      NC_000016.10:399431:C:T
      Gene:
      NME4 (Varview)
      Functional Consequence:
      coding_sequence_variant,intron_variant,synonymous_variant
      Validated:
      by frequency
      MAF:
      T=0.000004/1 (GnomAD_exomes)
      HGVS:
      4.

      rs1461171957 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        G>A [Show Flanks]
        Chromosome:
        16:399389 (GRCh38)
        16:449389 (GRCh37)
        Canonical SPDI:
        NC_000016.10:399388:G:A
        Gene:
        NME4 (Varview)
        Functional Consequence:
        intron_variant,missense_variant,coding_sequence_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        A=0.000054/1 (ALFA)
        A=0.000011/3 (TOPMED)
        A=0.000014/2 (GnomAD)
        A=0.000223/1 (Estonian)
        HGVS:
        6.

        rs1452196311 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          A>G [Show Flanks]
          Chromosome:
          16:400283 (GRCh38)
          16:450283 (GRCh37)
          Canonical SPDI:
          NC_000016.10:400282:A:G
          Gene:
          NME4 (Varview), DECR2 (Varview)
          Functional Consequence:
          2KB_upstream_variant,coding_sequence_variant,upstream_transcript_variant,3_prime_UTR_variant,missense_variant
          Validated:
          by frequency,by alfa,by cluster
          MAF:
          G=0.000047/1 (ALFA)
          G=0.000004/1 (GnomAD_exomes)
          G=0.000007/1 (GnomAD)
          HGVS:
          9.

          rs1426673118 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            G>T [Show Flanks]
            Chromosome:
            16:400276 (GRCh38)
            16:450276 (GRCh37)
            Canonical SPDI:
            NC_000016.10:400275:G:T
            Gene:
            NME4 (Varview), DECR2 (Varview)
            Functional Consequence:
            3_prime_UTR_variant,coding_sequence_variant,2KB_upstream_variant,missense_variant,upstream_transcript_variant
            Validated:
            by frequency,by alfa,by cluster
            MAF:
            T=0./0 (ALFA)
            T=0.000007/1 (GnomAD)
            T=0.000008/2 (TOPMED)
            HGVS:
            11.

            rs1398401301 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              A>C [Show Flanks]
              Chromosome:
              16:399401 (GRCh38)
              16:449401 (GRCh37)
              Canonical SPDI:
              NC_000016.10:399400:A:C
              Gene:
              NME4 (Varview)
              Functional Consequence:
              intron_variant,missense_variant,coding_sequence_variant
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              C=0.000028/1 (ALFA)
              C=0.000007/1 (GnomAD)
              C=0.000008/2 (TOPMED)
              HGVS:
              12.

              rs1387196612 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                C>T [Show Flanks]
                Chromosome:
                16:399440 (GRCh38)
                16:449440 (GRCh37)
                Canonical SPDI:
                NC_000016.10:399439:C:T
                Gene:
                NME4 (Varview)
                Functional Consequence:
                intron_variant,missense_variant,coding_sequence_variant
                Validated:
                by frequency,by alfa,by cluster
                MAF:
                T=0./0 (ALFA)
                T=0.000008/2 (GnomAD_exomes)
                T=0.000019/5 (TOPMED)
                T=0.000021/3 (GnomAD)
                HGVS:
                13.

                rs1386797878 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  G>C [Show Flanks]
                  Chromosome:
                  16:399402 (GRCh38)
                  16:449402 (GRCh37)
                  Canonical SPDI:
                  NC_000016.10:399401:G:C
                  Gene:
                  NME4 (Varview)
                  Functional Consequence:
                  intron_variant,missense_variant,coding_sequence_variant
                  Validated:
                  by frequency,by alfa,by cluster
                  MAF:
                  C=0.000071/1 (ALFA)
                  C=0.000004/1 (TOPMED)
                  C=0.000007/1 (GnomAD)
                  HGVS:
                  14.

                  rs1386537392 has merged into rs1260410957 [Homo sapiens]
                    Variant type:
                    DELINS
                    Alleles:
                    TGAGCTGG>-,TGAGCTGGTGAGCTGG [Show Flanks]
                    Chromosome:
                    16:400296 (GRCh38)
                    16:450296 (GRCh37)
                    Canonical SPDI:
                    NC_000016.10:400286:GTGAGCTGGTGAGCTGG:GTGAGCTGG,NC_000016.10:400286:GTGAGCTGGTGAGCTGG:GTGAGCTGGTGAGCTGGTGAGCTGG
                    Gene:
                    NME4 (Varview), DECR2 (Varview)
                    Functional Consequence:
                    coding_sequence_variant,stop_gained,frameshift_variant,3_prime_UTR_variant,2KB_upstream_variant,upstream_transcript_variant
                    Validated:
                    by frequency,by alfa,by cluster
                    MAF:
                    GTGAGCTGGTGAGCTGGTGAGCTGG=0./0 (ALFA)
                    -=0.000004/1 (GnomAD_exomes)
                    -=0.000008/2 (TOPMED)
                    HGVS:
                    NC_000016.10:g.400288TGAGCTGG[1], NC_000016.10:g.400288TGAGCTGG[3], NC_000016.9:g.450288TGAGCTGG[1], NC_000016.9:g.450288TGAGCTGG[3], NM_005009.3:c.518_525del, NM_005009.3:c.518_525dup, NM_005009.2:c.518_525del, NM_005009.2:c.518_525dup, NM_001286440.2:c.308_315del, NM_001286440.2:c.308_315dup, NM_001286440.1:c.308_315del, NM_001286440.1:c.308_315dup, NM_001286436.2:c.308_315del, NM_001286436.2:c.308_315dup, NM_001286436.1:c.308_315del, NM_001286436.1:c.308_315dup, NM_001286439.2:c.308_315del, NM_001286439.2:c.308_315dup, NM_001286439.1:c.308_315del, NM_001286439.1:c.308_315dup, NM_001286438.2:c.308_315del, NM_001286438.2:c.308_315dup, NM_001286438.1:c.308_315del, NM_001286438.1:c.308_315dup, NM_001286435.2:c.*98TGAGCTGG[1], NM_001286435.2:c.*98TGAGCTGG[3], NM_001286435.1:c.*98TGAGCTGG[1], NM_001286435.1:c.*98TGAGCTGG[3], NM_001286433.2:c.416_423del, NM_001286433.2:c.416_423dup, NM_001286433.1:c.416_423del, NM_001286433.1:c.416_423dup, NP_005000.1:p.Val173fs, NP_005000.1:p.Ala176Ter, NP_001273369.1:p.Val103fs, NP_001273369.1:p.Ala106Ter, NP_001273365.1:p.Val103fs, NP_001273365.1:p.Ala106Ter, NP_001273368.1:p.Val103fs, NP_001273368.1:p.Ala106Ter, NP_001273367.1:p.Val103fs, NP_001273367.1:p.Ala106Ter, NP_001273362.1:p.Val139fs, NP_001273362.1:p.Ala142Ter
                    15.

                    rs1367861687 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      C>G [Show Flanks]
                      Chromosome:
                      16:400339 (GRCh38)
                      16:450339 (GRCh37)
                      Canonical SPDI:
                      NC_000016.10:400338:C:G
                      Gene:
                      NME4 (Varview), DECR2 (Varview)
                      Functional Consequence:
                      upstream_transcript_variant,2KB_upstream_variant,synonymous_variant,3_prime_UTR_variant,coding_sequence_variant
                      Validated:
                      by frequency
                      MAF:
                      G=0.000004/1 (GnomAD_exomes)
                      HGVS:
                      16.

                      rs1364846331 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        C>A [Show Flanks]
                        Chromosome:
                        16:400333 (GRCh38)
                        16:450333 (GRCh37)
                        Canonical SPDI:
                        NC_000016.10:400332:C:A
                        Gene:
                        NME4 (Varview), DECR2 (Varview)
                        Functional Consequence:
                        missense_variant,upstream_transcript_variant,2KB_upstream_variant,3_prime_UTR_variant,coding_sequence_variant
                        Validated:
                        by frequency,by alfa
                        MAF:
                        A=0.000057/1 (ALFA)
                        A=0.000012/3 (GnomAD_exomes)
                        HGVS:
                        17.

                        rs1358156082 [Homo sapiens]
                          Variant type:
                          SNV
                          Alleles:
                          A>T [Show Flanks]
                          Chromosome:
                          16:399388 (GRCh38)
                          16:449388 (GRCh37)
                          Canonical SPDI:
                          NC_000016.10:399387:A:T
                          Gene:
                          NME4 (Varview)
                          Functional Consequence:
                          coding_sequence_variant,missense_variant,intron_variant
                          Validated:
                          by frequency,by alfa,by cluster
                          MAF:
                          T=0./0 (ALFA)
                          T=0.000004/1 (TOPMED)
                          T=0.000007/1 (GnomAD)
                          HGVS:
                          18.
                          19.

                          rs1347615137 [Homo sapiens]
                            Variant type:
                            SNV
                            Alleles:
                            G>A [Show Flanks]
                            Chromosome:
                            16:400289 (GRCh38)
                            16:450289 (GRCh37)
                            Canonical SPDI:
                            NC_000016.10:400288:G:A
                            Gene:
                            NME4 (Varview), DECR2 (Varview)
                            Functional Consequence:
                            2KB_upstream_variant,3_prime_UTR_variant,coding_sequence_variant,missense_variant,upstream_transcript_variant
                            Validated:
                            by frequency,by alfa,by cluster
                            MAF:
                            A=0./0 (ALFA)
                            A=0.000004/1 (GnomAD_exomes)
                            A=0.000004/1 (TOPMED)
                            A=0.000007/1 (GnomAD)
                            HGVS:

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