SNP Links for Protein (Select 6715602) - SNP

Links from Protein

Items: 1 to 20 of 102

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Select item 14904426751.

rs1490442675 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 6:28529458 (GRCh38)
6:28497235 (GRCh37)
Canonical SPDI:: NC_000006.12:28529457:G:A,NC_000006.12:28529457:G:T
Gene:: GPX5 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,non_coding_transcript_variant
Validated:: by cluster
HGVS:: NC_000006.12:g.28529458G>A, NC_000006.12:g.28529458G>T, NC_000006.11:g.28497235G>A, NC_000006.11:g.28497235G>T, NG_047054.1:g.8447G>A, NG_047054.1:g.8447G>T, NM_001509.3:c.95G>A, NM_001509.3:c.95G>T, NM_001509.2:c.95G>A, NM_001509.2:c.95G>T, NM_003996.3:c.95G>A, NM_003996.3:c.95G>T, NR_144470.2:n.291G>A, NR_144470.2:n.291G>T, NR_144470.1:n.286G>A, NR_144470.1:n.286G>T, NT_113891.3:g.19339G>A, NT_113891.3:g.19339G>T, NT_113891.2:g.19439G>A, NT_113891.2:g.19439G>T, NP_001500.1:p.Cys32Tyr, NP_001500.1:p.Cys32Phe, NP_003987.2:p.Cys32Tyr, NP_003987.2:p.Cys32Phe

Select item 14815832882.

rs1481583288 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:28529535 (GRCh38)
6:28497312 (GRCh37)
Canonical SPDI:: NC_000006.12:28529534:C:T
Gene:: GPX5 (Varview)
Functional Consequence:: coding_sequence_variant,stop_gained,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.28529535C>T, NC_000006.11:g.28497312C>T, NG_047054.1:g.8524C>T, NM_001509.3:c.172C>T, NM_001509.2:c.172C>T, NM_003996.3:c.172C>T, NR_144470.2:n.368C>T, NR_144470.1:n.363C>T, NT_113891.3:g.19416C>T, NT_113891.2:g.19516C>T, NP_001500.1:p.Gln58Ter, NP_003987.2:p.Gln58Ter

Select item 14726036953.

rs1472603695 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:28529480 (GRCh38)
6:28497257 (GRCh37)
Canonical SPDI:: NC_000006.12:28529479:C:T
Gene:: GPX5 (Varview)
Functional Consequence:: non_coding_transcript_variant,synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.28529480C>T, NC_000006.11:g.28497257C>T, NG_047054.1:g.8469C>T, NM_001509.3:c.117C>T, NM_001509.2:c.117C>T, NM_003996.3:c.117C>T, NR_144470.2:n.313C>T, NR_144470.1:n.308C>T, NT_113891.3:g.19361C>T, NT_113891.2:g.19461C>T

Select item 14456896884.

rs1445689688 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 6:28529567 (GRCh38)
6:28497344 (GRCh37)
Canonical SPDI:: NC_000006.12:28529566:C:G,NC_000006.12:28529566:C:T
Gene:: GPX5 (Varview)
Functional Consequence:: non_coding_transcript_variant,missense_variant,synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.28529567C>G, NC_000006.12:g.28529567C>T, NC_000006.11:g.28497344C>G, NC_000006.11:g.28497344C>T, NG_047054.1:g.8556C>G, NG_047054.1:g.8556C>T, NM_001509.3:c.204C>G, NM_001509.3:c.204C>T, NM_001509.2:c.204C>G, NM_001509.2:c.204C>T, NM_003996.3:c.204C>G, NM_003996.3:c.204C>T, NR_144470.2:n.400C>G, NR_144470.2:n.400C>T, NR_144470.1:n.395C>G, NR_144470.1:n.395C>T, NT_113891.3:g.19448C>G, NT_113891.3:g.19448C>T, NT_113891.2:g.19548C>G, NT_113891.2:g.19548C>T, NP_001500.1:p.Asn68Lys, NP_003987.2:p.Asn68Lys

Select item 14403984015.

rs1440398401 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 6:28529488 (GRCh38)
6:28497265 (GRCh37)
Canonical SPDI:: NC_000006.12:28529487:A:C
Gene:: GPX5 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.28529488A>C, NC_000006.11:g.28497265A>C, NG_047054.1:g.8477A>C, NM_001509.3:c.125A>C, NM_001509.2:c.125A>C, NM_003996.3:c.125A>C, NR_144470.2:n.321A>C, NR_144470.1:n.316A>C, NT_113891.3:g.19369A>C, NT_113891.2:g.19469A>C, NP_001500.1:p.Asp42Ala, NP_003987.2:p.Asp42Ala

Select item 14343454596.

rs1434345459 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:28532348 (GRCh38)
6:28500125 (GRCh37)
Canonical SPDI:: NC_000006.12:28532347:A:G
Gene:: GPX5 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,missense_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.28532348A>G, NC_000006.11:g.28500125A>G, NG_047054.1:g.11337A>G, NM_001509.3:c.387A>G, NM_001509.2:c.387A>G, NM_003996.3:c.269A>G, NR_144470.2:n.465A>G, NR_144470.1:n.460A>G, NT_113891.3:g.22229A>G, NT_113891.2:g.22329A>G, NP_003987.2:p.Tyr90Cys

Select item 14338251437.

rs1433825143 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:28529597 (GRCh38)
6:28497374 (GRCh37)
Canonical SPDI:: NC_000006.12:28529596:A:G
Gene:: GPX5 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000012/3 (GnomAD_exomes)
G=0.000068/18 (TOPMED)
G=0.000086/12 (GnomAD)
HGVS:: NC_000006.12:g.28529597A>G, NC_000006.11:g.28497374A>G, NG_047054.1:g.8586A>G, NM_001509.3:c.234A>G, NM_001509.2:c.234A>G, NM_003996.3:c.234A>G, NR_144470.2:n.430A>G, NR_144470.1:n.425A>G, NT_113891.3:g.19478A>G, NT_113891.2:g.19578A>G

Select item 14313403078.

rs1431340307 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 6:28526033 (GRCh38)
6:28493810 (GRCh37)
Canonical SPDI:: NC_000006.12:28526032:T:A
Gene:: GPX5 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,genic_upstream_transcript_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.28526033T>A, NC_000006.11:g.28493810T>A, NG_047054.1:g.5022T>A, NM_001509.3:c.20T>A, NM_001509.2:c.20T>A, NM_003996.3:c.20T>A, NT_113891.3:g.15914T>A, NT_113891.2:g.16014T>A, NP_001500.1:p.Val7Asp, NP_003987.2:p.Val7Asp

Select item 14111770779.

rs1411177077 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:28529531 (GRCh38)
6:28497308 (GRCh37)
Canonical SPDI:: NC_000006.12:28529530:C:T
Gene:: GPX5 (Varview)
Functional Consequence:: synonymous_variant,non_coding_transcript_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.28529531C>T, NC_000006.11:g.28497308C>T, NG_047054.1:g.8520C>T, NM_001509.3:c.168C>T, NM_001509.2:c.168C>T, NM_003996.3:c.168C>T, NR_144470.2:n.364C>T, NR_144470.1:n.359C>T, NT_113891.3:g.19412C>T, NT_113891.2:g.19512C>T

Select item 139358175210.

rs1393581752 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 6:28529498 (GRCh38)
6:28497275 (GRCh37)
Canonical SPDI:: NC_000006.12:28529497:C:A,NC_000006.12:28529497:C:T
Gene:: GPX5 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.28529498C>A, NC_000006.12:g.28529498C>T, NC_000006.11:g.28497275C>A, NC_000006.11:g.28497275C>T, NG_047054.1:g.8487C>A, NG_047054.1:g.8487C>T, NM_001509.3:c.135C>A, NM_001509.3:c.135C>T, NM_001509.2:c.135C>A, NM_001509.2:c.135C>T, NM_003996.3:c.135C>A, NM_003996.3:c.135C>T, NR_144470.2:n.331C>A, NR_144470.2:n.331C>T, NR_144470.1:n.326C>A, NR_144470.1:n.326C>T, NT_113891.3:g.19379C>A, NT_113891.3:g.19379C>T, NT_113891.2:g.19479C>A, NT_113891.2:g.19479C>T

Select item 133909988511.

rs1339099885 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:28532327 (GRCh38)
6:28500104 (GRCh37)
Canonical SPDI:: NC_000006.12:28532326:C:T
Gene:: GPX5 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,non_coding_transcript_variant,missense_variant
HGVS:: NC_000006.12:g.28532327C>T, NC_000006.11:g.28500104C>T, NG_047054.1:g.11316C>T, NM_001509.3:c.366C>T, NM_001509.2:c.366C>T, NM_003996.3:c.248C>T, NR_144470.2:n.444C>T, NR_144470.1:n.439C>T, NT_113891.3:g.22208C>T, NT_113891.2:g.22308C>T, NP_003987.2:p.Ser83Phe

Select item 132641569912.

rs1326415699 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:28526096 (GRCh38)
6:28493873 (GRCh37)
Canonical SPDI:: NC_000006.12:28526095:T:C
Gene:: GPX5 (Varview)
Functional Consequence:: coding_sequence_variant,genic_upstream_transcript_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000012/3 (GnomAD_exomes)
HGVS:: NC_000006.12:g.28526096T>C, NC_000006.11:g.28493873T>C, NG_047054.1:g.5085T>C, NM_001509.3:c.83T>C, NM_001509.2:c.83T>C, NM_003996.3:c.83T>C, NT_113891.3:g.15977T>C, NT_113891.2:g.16077T>C, NP_001500.1:p.Met28Thr, NP_003987.2:p.Met28Thr

Select item 131619960213.

rs1316199602 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 6:28532323 (GRCh38)
6:28500100 (GRCh37)
Canonical SPDI:: NC_000006.12:28532322:A:C
Gene:: GPX5 (Varview)
Functional Consequence:: coding_sequence_variant,non_coding_transcript_variant,missense_variant
Validated:: by frequency,by cluster
MAF:: C=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.28532323A>C, NC_000006.11:g.28500100A>C, NG_047054.1:g.11312A>C, NM_001509.3:c.362A>C, NM_001509.2:c.362A>C, NM_003996.3:c.244A>C, NR_144470.2:n.440A>C, NR_144470.1:n.435A>C, NT_113891.3:g.22204A>C, NT_113891.2:g.22304A>C, NP_001500.1:p.Tyr121Ser, NP_003987.2:p.Met82Leu

Select item 130899420314.

rs1308994203 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:28529602 (GRCh38)
6:28497379 (GRCh37)
Canonical SPDI:: NC_000006.12:28529601:C:T
Gene:: GPX5 (Varview)
Functional Consequence:: coding_sequence_variant,non_coding_transcript_variant,missense_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.28529602C>T, NC_000006.11:g.28497379C>T, NG_047054.1:g.8591C>T, NM_001509.3:c.239C>T, NM_001509.2:c.239C>T, NM_003996.3:c.239C>T, NR_144470.2:n.435C>T, NR_144470.1:n.430C>T, NT_113891.3:g.19483C>T, NT_113891.2:g.19583C>T, NP_001500.1:p.Pro80Leu, NP_003987.2:p.Pro80Leu

Select item 130763508715.

rs1307635087 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 6:28532331 (GRCh38)
6:28500108 (GRCh37)
Canonical SPDI:: NC_000006.12:28532330:C:G,NC_000006.12:28532330:C:T
Gene:: GPX5 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,non_coding_transcript_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.28532331C>G, NC_000006.12:g.28532331C>T, NC_000006.11:g.28500108C>G, NC_000006.11:g.28500108C>T, NG_047054.1:g.11320C>G, NG_047054.1:g.11320C>T, NM_001509.3:c.370C>G, NM_001509.3:c.370C>T, NM_001509.2:c.370C>G, NM_001509.2:c.370C>T, NM_003996.3:c.252C>G, NM_003996.3:c.252C>T, NR_144470.2:n.448C>G, NR_144470.2:n.448C>T, NR_144470.1:n.443C>G, NR_144470.1:n.443C>T, NT_113891.3:g.22212C>G, NT_113891.3:g.22212C>T, NT_113891.2:g.22312C>G, NT_113891.2:g.22312C>T, NP_001500.1:p.Pro124Ala, NP_001500.1:p.Pro124Ser

Select item 127365197016.

rs1273651970 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:28526068 (GRCh38)
6:28493845 (GRCh37)
Canonical SPDI:: NC_000006.12:28526067:G:A
Gene:: GPX5 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000006.12:g.28526068G>A, NC_000006.11:g.28493845G>A, NG_047054.1:g.5057G>A, NM_001509.3:c.55G>A, NM_001509.2:c.55G>A, NM_003996.3:c.55G>A, NT_113891.3:g.15949G>A, NT_113891.2:g.16049G>A, NP_001500.1:p.Val19Met, NP_003987.2:p.Val19Met

Select item 127148021317.

rs1271480213 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 6:28529583 (GRCh38)
6:28497360 (GRCh37)
Canonical SPDI:: NC_000006.12:28529582:G:T
Gene:: GPX5 (Varview)
Functional Consequence:: missense_variant,non_coding_transcript_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000006.12:g.28529583G>T, NC_000006.11:g.28497360G>T, NG_047054.1:g.8572G>T, NM_001509.3:c.220G>T, NM_001509.2:c.220G>T, NM_003996.3:c.220G>T, NR_144470.2:n.416G>T, NR_144470.1:n.411G>T, NT_113891.3:g.19464G>T, NT_113891.2:g.19564G>T, NP_001500.1:p.Gly74Cys, NP_003987.2:p.Gly74Cys

Select item 126896851818.

rs1268968518 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:28529495 (GRCh38)
6:28497272 (GRCh37)
Canonical SPDI:: NC_000006.12:28529494:G:A
Gene:: GPX5 (Varview)
Functional Consequence:: synonymous_variant,non_coding_transcript_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.28529495G>A, NC_000006.11:g.28497272G>A, NG_047054.1:g.8484G>A, NM_001509.3:c.132G>A, NM_001509.2:c.132G>A, NM_003996.3:c.132G>A, NR_144470.2:n.328G>A, NR_144470.1:n.323G>A, NT_113891.3:g.19376G>A, NT_113891.2:g.19476G>A

Select item 126696267319.

rs1266962673 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 6:28526086 (GRCh38)
6:28493863 (GRCh37)
Canonical SPDI:: NC_000006.12:28526085:C:A
Gene:: GPX5 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.28526086C>A, NC_000006.11:g.28493863C>A, NG_047054.1:g.5075C>A, NM_001509.3:c.73C>A, NM_001509.2:c.73C>A, NM_003996.3:c.73C>A, NT_113891.3:g.15967C>A, NT_113891.2:g.16067C>A, NP_001500.1:p.Gln25Lys, NP_003987.2:p.Gln25Lys

Select item 126519705020.

rs1265197050 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:28532354 (GRCh38)
6:28500131 (GRCh37)
Canonical SPDI:: NC_000006.12:28532353:T:C
Gene:: GPX5 (Varview)
Functional Consequence:: missense_variant,synonymous_variant,non_coding_transcript_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000006.12:g.28532354T>C, NC_000006.11:g.28500131T>C, NG_047054.1:g.11343T>C, NM_001509.3:c.393T>C, NM_001509.2:c.393T>C, NM_003996.3:c.275T>C, NR_144470.2:n.471T>C, NR_144470.1:n.466T>C, NT_113891.3:g.22235T>C, NT_113891.2:g.22335T>C, NP_003987.2:p.Val92Ala

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