SNP Links for Protein (Select 68533255) - SNP

Links from Protein

Items: 1 to 20 of 422

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Select item 14888115241.

rs1488811524 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:111234931 (GRCh38)
1:111777553 (GRCh37)
Canonical SPDI:: NC_000001.11:111234930:T:C
Gene:: CHI3L2 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.111234931T>C, NC_000001.10:g.111777553T>C, NG_082152.1:g.508T>C, NM_004000.3:c.354T>C, NM_004000.2:c.354T>C, NM_001025199.2:c.117T>C, NM_001025199.1:c.117T>C, NM_001025197.1:c.324T>C

Select item 14842091672.

rs1484209167 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:111227737 (GRCh38)
1:111770359 (GRCh37)
Canonical SPDI:: NC_000001.11:111227736:C:T
Gene:: CHI3L2 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,missense_variant,upstream_transcript_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.111227737C>T, NC_000001.10:g.111770359C>T, NM_004000.3:c.8C>T, NM_004000.2:c.8C>T, NM_001025197.1:c.8C>T, NP_003991.2:p.Ala3Val, NP_001020368.1:p.Ala3Val

Select item 14833374903.

rs1483337490 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:111235705 (GRCh38)
1:111778327 (GRCh37)
Canonical SPDI:: NC_000001.11:111235704:G:A
Gene:: CHI3L2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.111235705G>A, NC_000001.10:g.111778327G>A, NG_082152.1:g.1282G>A, NM_004000.3:c.547G>A, NM_004000.2:c.547G>A, NM_001025199.2:c.310G>A, NM_001025199.1:c.310G>A, NM_001025197.1:c.517G>A, NP_003991.2:p.Gly183Ser, NP_001020370.1:p.Gly104Ser, NP_001020368.1:p.Gly173Ser

Select item 14826686334.

rs1482668633 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:111230906 (GRCh38)
1:111773528 (GRCh37)
Canonical SPDI:: NC_000001.11:111230905:G:A
Gene:: CHI3L2 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.111230906G>A, NC_000001.10:g.111773528G>A, NM_004000.3:c.235G>A, NM_004000.2:c.235G>A, NM_001025199.2:c.-3G>A, NM_001025199.1:c.-3G>A, NM_001025197.1:c.205G>A, NP_003991.2:p.Val79Met, NP_001020368.1:p.Val69Met

Select item 14742437435.

rs1474243743 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:111236071 (GRCh38)
1:111778693 (GRCh37)
Canonical SPDI:: NC_000001.11:111236070:G:A
Gene:: CHI3L2 (Varview)
Functional Consequence:: coding_sequence_variant,stop_gained
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.111236071G>A, NC_000001.10:g.111778693G>A, NM_004000.3:c.653G>A, NM_004000.2:c.653G>A, NM_001025199.2:c.416G>A, NM_001025199.1:c.416G>A, NM_001025197.1:c.623G>A, NP_003991.2:p.Trp218Ter, NP_001020370.1:p.Trp139Ter, NP_001020368.1:p.Trp208Ter

Select item 14737021016.

rs1473702101 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:111238921 (GRCh38)
1:111781543 (GRCh37)
Canonical SPDI:: NC_000001.11:111238920:G:A,NC_000001.11:111238920:G:T
Gene:: CHI3L2 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000001.11:g.111238921G>A, NC_000001.11:g.111238921G>T, NC_000001.10:g.111781543G>A, NC_000001.10:g.111781543G>T, NM_004000.3:c.907G>A, NM_004000.3:c.907G>T, NM_004000.2:c.907G>A, NM_004000.2:c.907G>T, NM_001025199.2:c.670G>A, NM_001025199.2:c.670G>T, NM_001025199.1:c.670G>A, NM_001025199.1:c.670G>T, NM_001025197.1:c.877G>A, NM_001025197.1:c.877G>T, NP_003991.2:p.Ala303Thr, NP_003991.2:p.Ala303Ser, NP_001020370.1:p.Ala224Thr, NP_001020370.1:p.Ala224Ser, NP_001020368.1:p.Ala293Thr, NP_001020368.1:p.Ala293Ser

Select item 14728994117.

rs1472899411 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:111238797 (GRCh38)
1:111781419 (GRCh37)
Canonical SPDI:: NC_000001.11:111238796:G:A
Gene:: CHI3L2 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.111238797G>A, NC_000001.10:g.111781419G>A, NM_004000.3:c.783G>A, NM_004000.2:c.783G>A, NM_001025199.2:c.546G>A, NM_001025199.1:c.546G>A, NM_001025197.1:c.753G>A

Select item 14719889388.

rs1471988938 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 1:111230844 (GRCh38)
1:111773466 (GRCh37)
Canonical SPDI:: NC_000001.11:111230843:A:C,NC_000001.11:111230843:A:G
Gene:: CHI3L2 (Varview)
Functional Consequence:: missense_variant,5_prime_UTR_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000028/1 (ALFA)
C=0.000004/1 (GnomAD_exomes)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.111230844A>C, NC_000001.11:g.111230844A>G, NC_000001.10:g.111773466A>C, NC_000001.10:g.111773466A>G, NM_004000.3:c.173A>C, NM_004000.3:c.173A>G, NM_004000.2:c.173A>C, NM_004000.2:c.173A>G, NM_001025199.2:c.-65A>C, NM_001025199.2:c.-65A>G, NM_001025199.1:c.-65A>C, NM_001025199.1:c.-65A>G, NM_001025197.1:c.143A>C, NM_001025197.1:c.143A>G, NP_003991.2:p.His58Pro, NP_003991.2:p.His58Arg, NP_001020368.1:p.His48Pro, NP_001020368.1:p.His48Arg

Select item 14712384689.

rs1471238468 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:111241380 (GRCh38)
1:111784002 (GRCh37)
Canonical SPDI:: NC_000001.11:111241379:T:C
Gene:: CHI3L2 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.111241380T>C, NC_000001.10:g.111784002T>C, NM_004000.3:c.972T>C, NM_004000.2:c.972T>C, NM_001025199.2:c.735T>C, NM_001025199.1:c.735T>C, NM_001025197.1:c.942T>C

Select item 147046837210.

rs1470468372 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:111230759 (GRCh38)
1:111773381 (GRCh37)
Canonical SPDI:: NC_000001.11:111230758:G:T
Gene:: CHI3L2 (Varview)
Functional Consequence:: missense_variant,5_prime_UTR_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.111230759G>T, NC_000001.10:g.111773381G>T, NM_004000.3:c.88G>T, NM_004000.2:c.88G>T, NM_001025199.2:c.-150G>T, NM_001025199.1:c.-150G>T, NM_001025197.1:c.58G>T, NP_003991.2:p.Val30Phe, NP_001020368.1:p.Val20Phe

Select item 146656925611.

rs1466569256 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:111242299 (GRCh38)
1:111784921 (GRCh37)
Canonical SPDI:: NC_000001.11:111242298:A:T
Gene:: CHI3L2 (Varview)
Functional Consequence:: coding_sequence_variant,stop_gained
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.111242299A>T, NC_000001.10:g.111784921A>T, NM_004000.3:c.1108A>T, NM_004000.2:c.1108A>T, NM_001025199.2:c.871A>T, NM_001025199.1:c.871A>T, NM_001025197.1:c.1078A>T, NP_003991.2:p.Lys370Ter, NP_001020370.1:p.Lys291Ter, NP_001020368.1:p.Lys360Ter

Select item 146262223512.

rs1462622235 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:111241385 (GRCh38)
1:111784007 (GRCh37)
Canonical SPDI:: NC_000001.11:111241384:A:G
Gene:: CHI3L2 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.111241385A>G, NC_000001.10:g.111784007A>G, NM_004000.3:c.977A>G, NM_004000.2:c.977A>G, NM_001025199.2:c.740A>G, NM_001025199.1:c.740A>G, NM_001025197.1:c.947A>G, NP_003991.2:p.Tyr326Cys, NP_001020370.1:p.Tyr247Cys, NP_001020368.1:p.Tyr316Cys

Select item 145890117613.

rs1458901176 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:111234923 (GRCh38)
1:111777545 (GRCh37)
Canonical SPDI:: NC_000001.11:111234922:G:A
Gene:: CHI3L2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.111234923G>A, NC_000001.10:g.111777545G>A, NG_082152.1:g.500G>A, NM_004000.3:c.346G>A, NM_004000.2:c.346G>A, NM_001025199.2:c.109G>A, NM_001025199.1:c.109G>A, NM_001025197.1:c.316G>A, NP_003991.2:p.Asp116Asn, NP_001020370.1:p.Asp37Asn, NP_001020368.1:p.Asp106Asn

Select item 145509803414.

rs1455098034 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 1:111241433 (GRCh38)
1:111784055 (GRCh37)
Canonical SPDI:: NC_000001.11:111241432:T:A,NC_000001.11:111241432:T:C
Gene:: CHI3L2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.111241433T>A, NC_000001.11:g.111241433T>C, NC_000001.10:g.111784055T>A, NC_000001.10:g.111784055T>C, NM_004000.3:c.1025T>A, NM_004000.3:c.1025T>C, NM_004000.2:c.1025T>A, NM_004000.2:c.1025T>C, NM_001025199.2:c.788T>A, NM_001025199.2:c.788T>C, NM_001025199.1:c.788T>A, NM_001025199.1:c.788T>C, NM_001025197.1:c.995T>A, NM_001025197.1:c.995T>C, NP_003991.2:p.Met342Lys, NP_003991.2:p.Met342Thr, NP_001020370.1:p.Met263Lys, NP_001020370.1:p.Met263Thr, NP_001020368.1:p.Met332Lys, NP_001020368.1:p.Met332Thr

Select item 145462567915.

rs1454625679 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:111236129 (GRCh38)
1:111778751 (GRCh37)
Canonical SPDI:: NC_000001.11:111236128:A:T
Gene:: CHI3L2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.111236129A>T, NC_000001.10:g.111778751A>T, NM_004000.3:c.711A>T, NM_004000.2:c.711A>T, NM_001025199.2:c.474A>T, NM_001025199.1:c.474A>T, NM_001025197.1:c.681A>T, NP_003991.2:p.Arg237Ser, NP_001020370.1:p.Arg158Ser, NP_001020368.1:p.Arg227Ser

Select item 145053677416.

rs1450536774 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:111230931 (GRCh38)
1:111773553 (GRCh37)
Canonical SPDI:: NC_000001.11:111230930:G:T
Gene:: CHI3L2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.111230931G>T, NC_000001.10:g.111773553G>T, NM_004000.3:c.260G>T, NM_004000.2:c.260G>T, NM_001025199.2:c.23G>T, NM_001025199.1:c.23G>T, NM_001025197.1:c.230G>T, NP_003991.2:p.Ser87Ile, NP_001020370.1:p.Ser8Ile, NP_001020368.1:p.Ser77Ile

Select item 144931177317.

rs1449311773 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 1:111230917 (GRCh38)
1:111773539 (GRCh37)
Canonical SPDI:: NC_000001.11:111230916:C:A,NC_000001.11:111230916:C:G,NC_000001.11:111230916:C:T
Gene:: CHI3L2 (Varview)
Functional Consequence:: coding_sequence_variant,stop_gained,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
A=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.111230917C>A, NC_000001.11:g.111230917C>G, NC_000001.11:g.111230917C>T, NC_000001.10:g.111773539C>A, NC_000001.10:g.111773539C>G, NC_000001.10:g.111773539C>T, NM_004000.3:c.246C>A, NM_004000.3:c.246C>G, NM_004000.3:c.246C>T, NM_004000.2:c.246C>A, NM_004000.2:c.246C>G, NM_004000.2:c.246C>T, NM_001025199.2:c.9C>A, NM_001025199.2:c.9C>G, NM_001025199.2:c.9C>T, NM_001025199.1:c.9C>A, NM_001025199.1:c.9C>G, NM_001025199.1:c.9C>T, NM_001025197.1:c.216C>A, NM_001025197.1:c.216C>G, NM_001025197.1:c.216C>T, NP_003991.2:p.Tyr82Ter, NP_003991.2:p.Tyr82Ter, NP_001020370.1:p.Tyr3Ter, NP_001020370.1:p.Tyr3Ter, NP_001020368.1:p.Tyr72Ter, NP_001020368.1:p.Tyr72Ter

Select item 144725621418.

rs1447256214 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:111238881 (GRCh38)
1:111781503 (GRCh37)
Canonical SPDI:: NC_000001.11:111238880:T:G
Gene:: CHI3L2 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.111238881T>G, NC_000001.10:g.111781503T>G, NM_004000.3:c.867T>G, NM_004000.2:c.867T>G, NM_001025199.2:c.630T>G, NM_001025199.1:c.630T>G, NM_001025197.1:c.837T>G

Select item 144502865219.

rs1445028652 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:111238926 (GRCh38)
1:111781548 (GRCh37)
Canonical SPDI:: NC_000001.11:111238925:T:C
Gene:: CHI3L2 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.111238926T>C, NC_000001.10:g.111781548T>C, NM_004000.3:c.912T>C, NM_004000.2:c.912T>C, NM_001025199.2:c.675T>C, NM_001025199.1:c.675T>C, NM_001025197.1:c.882T>C

Select item 144206963720.

rs1442069637 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:111242349 (GRCh38)
1:111784971 (GRCh37)
Canonical SPDI:: NC_000001.11:111242348:C:A
Gene:: CHI3L2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.111242349C>A, NC_000001.10:g.111784971C>A, NM_004000.3:c.1158C>A, NM_004000.2:c.1158C>A, NM_001025199.2:c.921C>A, NM_001025199.1:c.921C>A, NM_001025197.1:c.1128C>A, NP_003991.2:p.Ser386Arg, NP_001020370.1:p.Ser307Arg, NP_001020368.1:p.Ser376Arg

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