SNP Links for Protein (Select 75677594) - SNP

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Links from Protein

Items: 1 to 20 of 766

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Select item 14894429171.

rs1489442917 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:118010 (GRCh38)
9:118010 (GRCh37)
Canonical SPDI:: NC_000009.12:118009:T:C
Gene:: FOXD4 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000009.12:g.118010T>C, NC_000009.11:g.118010T>C, NG_032165.1:g.5408A>G, NM_207305.5:c.110A>G, NM_207305.4:c.110A>G, NP_997188.2:p.Asp37Gly

Select item 14874322532.

rs1487432253 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:117247 (GRCh38)
9:117247 (GRCh37)
Canonical SPDI:: NC_000009.12:117246:G:A
Gene:: FOXD4 (Varview), LINC01388 (Varview)
Functional Consequence:: coding_sequence_variant,upstream_transcript_variant,synonymous_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.117247G>A, NC_000009.11:g.117247G>A, NG_032165.1:g.6171C>T, NM_207305.5:c.873C>T, NM_207305.4:c.873C>T

Select item 14814755613.

rs1481475561 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 9:117094 (GRCh38)
9:117094 (GRCh37)
Canonical SPDI:: NC_000009.12:117093:G:C
Gene:: FOXD4 (Varview), LINC01388 (Varview)
Functional Consequence:: coding_sequence_variant,upstream_transcript_variant,synonymous_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.117094G>C, NC_000009.11:g.117094G>C, NG_032165.1:g.6324C>G, NM_207305.5:c.1026C>G, NM_207305.4:c.1026C>G

Select item 14790461914.

rs1479046191 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 9:117976 (GRCh38)
9:117976 (GRCh37)
Canonical SPDI:: NC_000009.12:117975:C:G,NC_000009.12:117975:C:T
Gene:: FOXD4 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
G=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.117976C>G, NC_000009.12:g.117976C>T, NC_000009.11:g.117976C>G, NC_000009.11:g.117976C>T, NG_032165.1:g.5442G>C, NG_032165.1:g.5442G>A, NM_207305.5:c.144G>C, NM_207305.5:c.144G>A, NM_207305.4:c.144G>C, NM_207305.4:c.144G>A, NP_997188.2:p.Glu48Asp

Select item 14788509815.

rs1478850981 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,G [Show Flanks]
Chromosome:: 9:118116 (GRCh38)
9:118116 (GRCh37)
Canonical SPDI:: NC_000009.12:118115:T:A,NC_000009.12:118115:T:G
Gene:: FOXD4 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000056/2 (ALFA)
G=0.000004/1 (GnomAD_exomes)
G=0.000007/1 (GnomAD)
G=0.000019/5 (TOPMED)
HGVS:: NC_000009.12:g.118116T>A, NC_000009.12:g.118116T>G, NC_000009.11:g.118116T>A, NC_000009.11:g.118116T>G, NG_032165.1:g.5302A>T, NG_032165.1:g.5302A>C, NM_207305.5:c.4A>T, NM_207305.5:c.4A>C, NM_207305.4:c.4A>T, NM_207305.4:c.4A>C, NP_997188.2:p.Asn2Tyr, NP_997188.2:p.Asn2His

Select item 14754372126.

rs1475437212 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 9:117425 (GRCh38)
9:117425 (GRCh37)
Canonical SPDI:: NC_000009.12:117424:A:C
Gene:: FOXD4 (Varview), LINC01388 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant,missense_variant
HGVS:: NC_000009.12:g.117425A>C, NC_000009.11:g.117425A>C, NG_032165.1:g.5993T>G, NM_207305.5:c.695T>G, NM_207305.4:c.695T>G, NP_997188.2:p.Leu232Arg

Select item 14753051277.

rs1475305127 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:116885 (GRCh38)
9:116885 (GRCh37)
Canonical SPDI:: NC_000009.12:116884:G:A
Gene:: FOXD4 (Varview), LINC01388 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.116885G>A, NC_000009.11:g.116885G>A, NG_032165.1:g.6533C>T, NM_207305.5:c.1235C>T, NM_207305.4:c.1235C>T, NP_997188.2:p.Ala412Val

Select item 14745173538.

rs1474517353 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:116816 (GRCh38)
9:116816 (GRCh37)
Canonical SPDI:: NC_000009.12:116815:G:A
Gene:: FOXD4 (Varview), LINC01388 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.116816G>A, NC_000009.11:g.116816G>A, NG_032165.1:g.6602C>T, NM_207305.5:c.1304C>T, NM_207305.4:c.1304C>T, NP_997188.2:p.Ser435Phe

Select item 14738177429.

rs1473817742 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:116998 (GRCh38)
9:116998 (GRCh37)
Canonical SPDI:: NC_000009.12:116997:G:A
Gene:: FOXD4 (Varview), LINC01388 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.116998G>A, NC_000009.11:g.116998G>A, NG_032165.1:g.6420C>T, NM_207305.5:c.1122C>T, NM_207305.4:c.1122C>T

Select item 147270109010.

rs1472701090 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 9:117253 (GRCh38)
9:117253 (GRCh37)
Canonical SPDI:: NC_000009.12:117252:C:A,NC_000009.12:117252:C:T
Gene:: FOXD4 (Varview), LINC01388 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.117253C>A, NC_000009.12:g.117253C>T, NC_000009.11:g.117253C>A, NC_000009.11:g.117253C>T, NG_032165.1:g.6165G>T, NG_032165.1:g.6165G>A, NM_207305.5:c.867G>T, NM_207305.5:c.867G>A, NM_207305.4:c.867G>T, NM_207305.4:c.867G>A

Select item 147074880511.

rs1470748805 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 9:116858 (GRCh38)
9:116858 (GRCh37)
Canonical SPDI:: NC_000009.12:116857:G:A,NC_000009.12:116857:G:T
Gene:: FOXD4 (Varview), LINC01388 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000094/1 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000009.12:g.116858G>A, NC_000009.12:g.116858G>T, NC_000009.11:g.116858G>A, NC_000009.11:g.116858G>T, NG_032165.1:g.6560C>T, NG_032165.1:g.6560C>A, NM_207305.5:c.1262C>T, NM_207305.5:c.1262C>A, NM_207305.4:c.1262C>T, NM_207305.4:c.1262C>A, NP_997188.2:p.Pro421Leu, NP_997188.2:p.Pro421Gln

Select item 147022402012.

rs1470224020 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 9:117374 (GRCh38)
9:117374 (GRCh37)
Canonical SPDI:: NC_000009.12:117373:G:A,NC_000009.12:117373:G:C
Gene:: FOXD4 (Varview), LINC01388 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000094/1 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.117374G>A, NC_000009.12:g.117374G>C, NC_000009.11:g.117374G>A, NC_000009.11:g.117374G>C, NG_032165.1:g.6044C>T, NG_032165.1:g.6044C>G, NM_207305.5:c.746C>T, NM_207305.5:c.746C>G, NM_207305.4:c.746C>T, NM_207305.4:c.746C>G, NP_997188.2:p.Thr249Ile, NP_997188.2:p.Thr249Ser

Select item 146800151713.

rs1468001517 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:117186 (GRCh38)
9:117186 (GRCh37)
Canonical SPDI:: NC_000009.12:117185:G:A
Gene:: FOXD4 (Varview), LINC01388 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant,missense_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.117186G>A, NC_000009.11:g.117186G>A, NG_032165.1:g.6232C>T, NM_207305.5:c.934C>T, NM_207305.4:c.934C>T, NP_997188.2:p.Arg312Cys

Select item 146668725214.

rs1466687252 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:116810 (GRCh38)
9:116810 (GRCh37)
Canonical SPDI:: NC_000009.12:116809:C:T
Gene:: FOXD4 (Varview), LINC01388 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.116810C>T, NC_000009.11:g.116810C>T, NG_032165.1:g.6608G>A, NM_207305.5:c.1310G>A, NM_207305.4:c.1310G>A, NP_997188.2:p.Gly437Glu

Select item 146666446415.

rs1466664464 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 9:117547 (GRCh38)
9:117547 (GRCh37)
Canonical SPDI:: NC_000009.12:117546:G:C
Gene:: FOXD4 (Varview), LINC01388 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.117547G>C, NC_000009.11:g.117547G>C, NG_032165.1:g.5871C>G, NM_207305.5:c.573C>G, NM_207305.4:c.573C>G

Select item 146494009116.

rs1464940091 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 9:117351 (GRCh38)
9:117351 (GRCh37)
Canonical SPDI:: NC_000009.12:117350:C:A
Gene:: FOXD4 (Varview), LINC01388 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant,missense_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.117351C>A, NC_000009.11:g.117351C>A, NG_032165.1:g.6067G>T, NM_207305.5:c.769G>T, NM_207305.4:c.769G>T, NP_997188.2:p.Ala257Ser

Select item 146453950217.

rs1464539502 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:117592 (GRCh38)
9:117592 (GRCh37)
Canonical SPDI:: NC_000009.12:117591:G:A
Gene:: FOXD4 (Varview), LINC01388 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant,synonymous_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.117592G>A, NC_000009.11:g.117592G>A, NG_032165.1:g.5826C>T, NM_207305.5:c.528C>T, NM_207305.4:c.528C>T

Select item 146425660418.

rs1464256604 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:117343 (GRCh38)
9:117343 (GRCh37)
Canonical SPDI:: NC_000009.12:117342:C:T
Gene:: FOXD4 (Varview), LINC01388 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant,synonymous_variant
HGVS:: NC_000009.12:g.117343C>T, NC_000009.11:g.117343C>T, NG_032165.1:g.6075G>A, NM_207305.5:c.777G>A, NM_207305.4:c.777G>A

Select item 146340024219.

rs1463400242 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:116954 (GRCh38)
9:116954 (GRCh37)
Canonical SPDI:: NC_000009.12:116953:A:G
Gene:: FOXD4 (Varview), LINC01388 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
G=0.000007/1 (GnomAD)
G=0.000035/1 (TOMMO)
G=0.000156/1 (1000Genomes)
HGVS:: NC_000009.12:g.116954A>G, NC_000009.11:g.116954A>G, NG_032165.1:g.6464T>C, NM_207305.5:c.1166T>C, NM_207305.4:c.1166T>C, NP_997188.2:p.Leu389Pro

Select item 146313391920.

rs1463133919 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 9:117185 (GRCh38)
9:117185 (GRCh37)
Canonical SPDI:: NC_000009.12:117184:C:A,NC_000009.12:117184:C:T
Gene:: FOXD4 (Varview), LINC01388 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000009.12:g.117185C>A, NC_000009.12:g.117185C>T, NC_000009.11:g.117185C>A, NC_000009.11:g.117185C>T, NG_032165.1:g.6233G>T, NG_032165.1:g.6233G>A, NM_207305.5:c.935G>T, NM_207305.5:c.935G>A, NM_207305.4:c.935G>T, NM_207305.4:c.935G>A, NP_997188.2:p.Arg312Leu, NP_997188.2:p.Arg312His

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