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Links from Protein

Items: 1 to 20 of 184

1.
3.
5.

rs1455534368 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    G>A [Show Flanks]
    Chromosome:
    8:144425026 (GRCh38)
    8:145650409 (GRCh37)
    Canonical SPDI:
    NC_000008.11:144425025:G:A
    Gene:
    VPS28 (Varview)
    Functional Consequence:
    intron_variant,coding_sequence_variant,synonymous_variant
    Validated:
    by frequency,by alfa
    MAF:
    A=0./0 (ALFA)
    HGVS:
    6.

    rs1443454887 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      G>A [Show Flanks]
      Chromosome:
      8:144425003 (GRCh38)
      8:145650386 (GRCh37)
      Canonical SPDI:
      NC_000008.11:144425002:G:A
      Gene:
      VPS28 (Varview)
      Functional Consequence:
      synonymous_variant,intron_variant,coding_sequence_variant
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      A=0./0 (ALFA)
      A=0.000012/2 (GnomAD_exomes)
      A=0.000023/6 (TOPMED)
      A=0.000043/6 (GnomAD)
      HGVS:
      7.

      rs1441036137 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        T>C [Show Flanks]
        Chromosome:
        8:144425733 (GRCh38)
        8:145651116 (GRCh37)
        Canonical SPDI:
        NC_000008.11:144425732:T:C
        Gene:
        VPS28 (Varview)
        Functional Consequence:
        synonymous_variant,coding_sequence_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        C=0./0 (ALFA)
        C=0.000007/1 (GnomAD)
        C=0.000008/2 (TOPMED)
        HGVS:
        9.

        rs1433963086 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          C>A [Show Flanks]
          Chromosome:
          8:144423888 (GRCh38)
          8:145649271 (GRCh37)
          Canonical SPDI:
          NC_000008.11:144423887:C:A
          Gene:
          VPS28 (Varview)
          Functional Consequence:
          stop_gained,stop_lost,terminator_codon_variant,coding_sequence_variant
          Validated:
          by frequency,by alfa,by cluster
          MAF:
          A=0./0 (ALFA)
          A=0.000004/1 (TOPMED)
          A=0.000007/1 (GnomAD)
          HGVS:
          10.

          rs1405556694 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            A>G [Show Flanks]
            Chromosome:
            8:144425771 (GRCh38)
            8:145651154 (GRCh37)
            Canonical SPDI:
            NC_000008.11:144425770:A:G
            Gene:
            VPS28 (Varview)
            Functional Consequence:
            5_prime_UTR_variant,missense_variant,coding_sequence_variant
            Validated:
            by frequency,by alfa,by cluster
            MAF:
            G=0./0 (ALFA)
            G=0.000007/1 (GnomAD)
            G=0.000008/2 (TOPMED)
            HGVS:
            11.

            rs1403616554 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              G>A [Show Flanks]
              Chromosome:
              8:144424093 (GRCh38)
              8:145649476 (GRCh37)
              Canonical SPDI:
              NC_000008.11:144424092:G:A
              Gene:
              VPS28 (Varview)
              Functional Consequence:
              missense_variant,coding_sequence_variant
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              A=0.000044/1 (ALFA)
              A=0.000011/3 (TOPMED)
              A=0.000021/3 (GnomAD)
              A=0.000071/2 (TOMMO)
              HGVS:
              12.
              13.
              14.

              rs1393877832 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                C>A,G,T [Show Flanks]
                Chromosome:
                8:144426038 (GRCh38)
                8:145651421 (GRCh37)
                Canonical SPDI:
                NC_000008.11:144426037:C:A,NC_000008.11:144426037:C:G,NC_000008.11:144426037:C:T
                Gene:
                VPS28 (Varview)
                Functional Consequence:
                genic_upstream_transcript_variant,5_prime_UTR_variant,upstream_transcript_variant,coding_sequence_variant,missense_variant
                Validated:
                by frequency,by alfa,by cluster
                MAF:
                T=0./0 (ALFA)
                A=0.000007/1 (GnomAD)
                T=0.000023/6 (TOPMED)
                T=0.000546/1 (Korea1K)
                HGVS:
                NC_000008.11:g.144426038C>A, NC_000008.11:g.144426038C>G, NC_000008.11:g.144426038C>T, NW_003315924.1:g.195297C>A, NW_003315924.1:g.195297C>G, NW_003315924.1:g.195297C>T, NG_029456.2:g.7507G>T, NG_029456.2:g.7507G>C, NG_029456.2:g.7507G>A, NM_016208.4:c.92G>T, NM_016208.4:c.92G>C, NM_016208.4:c.92G>A, NM_016208.3:c.92G>T, NM_016208.3:c.92G>C, NM_016208.3:c.92G>A, NM_183057.3:c.92G>T, NM_183057.3:c.92G>C, NM_183057.3:c.92G>A, NM_183057.2:c.92G>T, NM_183057.2:c.92G>C, NM_183057.2:c.92G>A, NW_018654716.1:g.156640C>A, NW_018654716.1:g.156640C>G, NW_018654716.1:g.156640C>T, NC_000008.10:g.145651421C>A, NC_000008.10:g.145651421C>G, NC_000008.10:g.145651421C>T, XM_005272324.4:c.92G>T, XM_005272324.4:c.92G>C, XM_005272324.4:c.92G>A, XM_005272324.3:c.92G>T, XM_005272324.3:c.92G>C, XM_005272324.3:c.92G>A, XM_005272324.2:c.92G>T, XM_005272324.2:c.92G>C, XM_005272324.2:c.92G>A, XM_005272324.1:c.92G>T, XM_005272324.1:c.92G>C, XM_005272324.1:c.92G>A, XM_047421845.1:c.-127G>T, XM_047421845.1:c.-127G>C, XM_047421845.1:c.-127G>A, NP_057292.1:p.Arg31Leu, NP_057292.1:p.Arg31Pro, NP_057292.1:p.Arg31Gln, NP_898880.1:p.Arg31Leu, NP_898880.1:p.Arg31Pro, NP_898880.1:p.Arg31Gln, XP_005272381.1:p.Arg31Leu, XP_005272381.1:p.Arg31Pro, XP_005272381.1:p.Arg31Gln
                16.
                17.
                18.

                rs1374341409 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  G>A [Show Flanks]
                  Chromosome:
                  8:144425021 (GRCh38)
                  8:145650404 (GRCh37)
                  Canonical SPDI:
                  NC_000008.11:144425020:G:A
                  Gene:
                  VPS28 (Varview)
                  Functional Consequence:
                  synonymous_variant,coding_sequence_variant,intron_variant
                  Validated:
                  by frequency,by alfa,by cluster
                  MAF:
                  A=0./0 (ALFA)
                  A=0.000004/1 (TOPMED)
                  A=0.000007/1 (GnomAD)
                  HGVS:
                  19.

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