SNP Links for Protein (Select 7706706) - SNP

Links from Protein

Items: 1 to 20 of 486

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Select item 14898613061.

rs1489861306 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 6:157927203 (GRCh38)
6:158348235 (GRCh37)
Canonical SPDI:: NC_000006.12:157927202:C:A,NC_000006.12:157927202:C:G,NC_000006.12:157927202:C:T
Gene:: SNX9 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
T=0.000546/1 (Korea1K)
HGVS:: NC_000006.12:g.157927203C>A, NC_000006.12:g.157927203C>G, NC_000006.12:g.157927203C>T, NC_000006.11:g.158348235C>A, NC_000006.11:g.158348235C>G, NC_000006.11:g.158348235C>T, NM_016224.5:c.1173C>A, NM_016224.5:c.1173C>G, NM_016224.5:c.1173C>T, NM_016224.4:c.1173C>A, NM_016224.4:c.1173C>G, NM_016224.4:c.1173C>T, XM_011535886.4:c.891C>A, XM_011535886.4:c.891C>G, XM_011535886.4:c.891C>T, XM_011535886.3:c.891C>A, XM_011535886.3:c.891C>G, XM_011535886.3:c.891C>T, XM_011535886.2:c.891C>A, XM_011535886.2:c.891C>G, XM_011535886.2:c.891C>T, XM_011535886.1:c.891C>A, XM_011535886.1:c.891C>G, XM_011535886.1:c.891C>T, NP_057308.1:p.Asp391Glu, NP_057308.1:p.Asp391Glu, XP_011534188.1:p.Asp297Glu, XP_011534188.1:p.Asp297Glu

Select item 14833464012.

rs1483346401 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:157901901 (GRCh38)
6:158322933 (GRCh37)
Canonical SPDI:: NC_000006.12:157901900:C:T
Gene:: SNX9 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.157901901C>T, NC_000006.11:g.158322933C>T, NM_016224.5:c.476C>T, NM_016224.4:c.476C>T, XM_011535886.4:c.194C>T, XM_011535886.3:c.194C>T, XM_011535886.2:c.194C>T, XM_011535886.1:c.194C>T, NP_057308.1:p.Thr159Ile, XP_011534188.1:p.Thr65Ile

Select item 14827485713.

rs1482748571 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:157937449 (GRCh38)
6:158358481 (GRCh37)
Canonical SPDI:: NC_000006.12:157937448:C:T
Gene:: SNX9 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000028/1 (ALFA)
T=0.000008/2 (GnomAD_exomes)
T=0.000019/5 (TOPMED)
HGVS:: NC_000006.12:g.157937449C>T, NC_000006.11:g.158358481C>T, NM_016224.5:c.1459C>T, NM_016224.4:c.1459C>T, XM_011535886.4:c.1177C>T, XM_011535886.3:c.1177C>T, XM_011535886.2:c.1177C>T, XM_011535886.1:c.1177C>T, NP_057308.1:p.His487Tyr, XP_011534188.1:p.His393Tyr

Select item 14795617974.

rs1479561797 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:157937464 (GRCh38)
6:158358496 (GRCh37)
Canonical SPDI:: NC_000006.12:157937463:T:C
Gene:: SNX9 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.157937464T>C, NC_000006.11:g.158358496T>C, NM_016224.5:c.1474T>C, NM_016224.4:c.1474T>C, XM_011535886.4:c.1192T>C, XM_011535886.3:c.1192T>C, XM_011535886.2:c.1192T>C, XM_011535886.1:c.1192T>C, NP_057308.1:p.Cys492Arg, XP_011534188.1:p.Cys398Arg

Select item 14793697915.

rs1479369791 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:157928602 (GRCh38)
6:158349634 (GRCh37)
Canonical SPDI:: NC_000006.12:157928601:G:A
Gene:: SNX9 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.157928602G>A, NC_000006.11:g.158349634G>A, NM_016224.5:c.1188G>A, NM_016224.4:c.1188G>A, XM_011535886.4:c.906G>A, XM_011535886.3:c.906G>A, XM_011535886.2:c.906G>A, XM_011535886.1:c.906G>A

Select item 14770936586.

rs1477093658 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:157906191 (GRCh38)
6:158327223 (GRCh37)
Canonical SPDI:: NC_000006.12:157906190:C:T
Gene:: SNX9 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.157906191C>T, NC_000006.11:g.158327223C>T, NM_016224.5:c.684C>T, NM_016224.4:c.684C>T, XM_011535886.4:c.402C>T, XM_011535886.3:c.402C>T, XM_011535886.2:c.402C>T, XM_011535886.1:c.402C>T

Select item 14758677427.

rs1475867742 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 6:157867577 (GRCh38)
6:158288609 (GRCh37)
Canonical SPDI:: NC_000006.12:157867576:C:G
Gene:: SNX9 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.157867577C>G, NC_000006.11:g.158288609C>G, NM_016224.5:c.43C>G, NM_016224.4:c.43C>G, NP_057308.1:p.Pro15Ala

Select item 14707493468.

rs1470749346 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:157928691 (GRCh38)
6:158349723 (GRCh37)
Canonical SPDI:: NC_000006.12:157928690:G:A
Gene:: SNX9 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000006.12:g.157928691G>A, NC_000006.11:g.158349723G>A, NM_016224.5:c.1277G>A, NM_016224.4:c.1277G>A, XM_011535886.4:c.995G>A, XM_011535886.3:c.995G>A, XM_011535886.2:c.995G>A, XM_011535886.1:c.995G>A, NP_057308.1:p.Arg426His, XP_011534188.1:p.Arg332His

Select item 14681853119.

rs1468185311 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:157909989 (GRCh38)
6:158331021 (GRCh37)
Canonical SPDI:: NC_000006.12:157909988:A:G
Gene:: SNX9 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000006.12:g.157909989A>G, NC_000006.11:g.158331021A>G, NM_016224.5:c.913A>G, NM_016224.4:c.913A>G, XM_011535886.4:c.631A>G, XM_011535886.3:c.631A>G, XM_011535886.2:c.631A>G, XM_011535886.1:c.631A>G, NP_057308.1:p.Ile305Val, XP_011534188.1:p.Ile211Val

Select item 146143540910.

rs1461435409 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:157932197 (GRCh38)
6:158353229 (GRCh37)
Canonical SPDI:: NC_000006.12:157932196:T:C
Gene:: SNX9 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.157932197T>C, NC_000006.11:g.158353229T>C, NM_016224.5:c.1291T>C, NM_016224.4:c.1291T>C, XM_011535886.4:c.1009T>C, XM_011535886.3:c.1009T>C, XM_011535886.2:c.1009T>C, XM_011535886.1:c.1009T>C

Select item 145968324211.

rs1459683242 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 6:157921639 (GRCh38)
6:158342671 (GRCh37)
Canonical SPDI:: NC_000006.12:157921638:T:G
Gene:: SNX9 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.157921639T>G, NC_000006.11:g.158342671T>G, NM_016224.5:c.1058T>G, NM_016224.4:c.1058T>G, XM_011535886.4:c.776T>G, XM_011535886.3:c.776T>G, XM_011535886.2:c.776T>G, XM_011535886.1:c.776T>G, NP_057308.1:p.Phe353Cys, XP_011534188.1:p.Phe259Cys

Select item 145859621412.

rs1458596214 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:157928693 (GRCh38)
6:158349725 (GRCh37)
Canonical SPDI:: NC_000006.12:157928692:T:C
Gene:: SNX9 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.157928693T>C, NC_000006.11:g.158349725T>C, NM_016224.5:c.1279T>C, NM_016224.4:c.1279T>C, XM_011535886.4:c.997T>C, XM_011535886.3:c.997T>C, XM_011535886.2:c.997T>C, XM_011535886.1:c.997T>C, NP_057308.1:p.Cys427Arg, XP_011534188.1:p.Cys333Arg

Select item 145809889313.

rs1458098893 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:157932195 (GRCh38)
6:158353227 (GRCh37)
Canonical SPDI:: NC_000006.12:157932194:C:T
Gene:: SNX9 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000006.12:g.157932195C>T, NC_000006.11:g.158353227C>T, NM_016224.5:c.1289C>T, NM_016224.4:c.1289C>T, XM_011535886.4:c.1007C>T, XM_011535886.3:c.1007C>T, XM_011535886.2:c.1007C>T, XM_011535886.1:c.1007C>T, NP_057308.1:p.Pro430Leu, XP_011534188.1:p.Pro336Leu

Select item 145673406114.

rs1456734061 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:157896905 (GRCh38)
6:158317937 (GRCh37)
Canonical SPDI:: NC_000006.12:157896904:G:A
Gene:: SNX9 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by cluster
MAF:: A=0.000004/1 (GnomAD_exomes)
A=0.000342/1 (KOREAN)
HGVS:: NC_000006.12:g.157896905G>A, NC_000006.11:g.158317937G>A, NM_016224.5:c.379G>A, NM_016224.4:c.379G>A, XM_011535886.4:c.97G>A, XM_011535886.3:c.97G>A, XM_011535886.2:c.97G>A, XM_011535886.1:c.97G>A, NP_057308.1:p.Ala127Thr, XP_011534188.1:p.Ala33Thr

Select item 145647937015.

rs1456479370 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:157938719 (GRCh38)
6:158359751 (GRCh37)
Canonical SPDI:: NC_000006.12:157938718:A:G
Gene:: SNX9 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.157938719A>G, NC_000006.11:g.158359751A>G, NM_016224.5:c.1620A>G, NM_016224.4:c.1620A>G, XM_011535886.4:c.1338A>G, XM_011535886.3:c.1338A>G, XM_011535886.2:c.1338A>G, XM_011535886.1:c.1338A>G

Select item 145451883716.

rs1454518837 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:157938738 (GRCh38)
6:158359770 (GRCh37)
Canonical SPDI:: NC_000006.12:157938737:G:A
Gene:: SNX9 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000094/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
A=0.000012/3 (GnomAD_exomes)
HGVS:: NC_000006.12:g.157938738G>A, NC_000006.11:g.158359770G>A, NM_016224.5:c.1639G>A, NM_016224.4:c.1639G>A, XM_011535886.4:c.1357G>A, XM_011535886.3:c.1357G>A, XM_011535886.2:c.1357G>A, XM_011535886.1:c.1357G>A, NP_057308.1:p.Ala547Thr, XP_011534188.1:p.Ala453Thr

Select item 145306343117.

rs1453063431 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:157940963 (GRCh38)
6:158361995 (GRCh37)
Canonical SPDI:: NC_000006.12:157940962:T:C
Gene:: SNX9 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.157940963T>C, NC_000006.11:g.158361995T>C, NM_016224.5:c.1729T>C, NM_016224.4:c.1729T>C, XM_011535886.4:c.1447T>C, XM_011535886.3:c.1447T>C, XM_011535886.2:c.1447T>C, XM_011535886.1:c.1447T>C, NP_057308.1:p.Phe577Leu, XP_011534188.1:p.Phe483Leu

Select item 145248367318.

rs1452483673 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:157937504 (GRCh38)
6:158358536 (GRCh37)
Canonical SPDI:: NC_000006.12:157937503:A:G
Gene:: SNX9 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.0002/1 (ALFA)
G=0.0002/1 (Estonian)
HGVS:: NC_000006.12:g.157937504A>G, NC_000006.11:g.158358536A>G, NM_016224.5:c.1514A>G, NM_016224.4:c.1514A>G, XM_011535886.4:c.1232A>G, XM_011535886.3:c.1232A>G, XM_011535886.2:c.1232A>G, XM_011535886.1:c.1232A>G, NP_057308.1:p.Asp505Gly, XP_011534188.1:p.Asp411Gly

Select item 145080538519.

rs1450805385 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:157875107 (GRCh38)
6:158296139 (GRCh37)
Canonical SPDI:: NC_000006.12:157875106:A:G
Gene:: SNX9 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
G=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.157875107A>G, NC_000006.11:g.158296139A>G, NM_016224.5:c.231A>G, NM_016224.4:c.231A>G

Select item 144799752820.

rs1447997528 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:157937496 (GRCh38)
6:158358528 (GRCh37)
Canonical SPDI:: NC_000006.12:157937495:C:T
Gene:: SNX9 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000342/1 (KOREAN)
HGVS:: NC_000006.12:g.157937496C>T, NC_000006.11:g.158358528C>T, NM_016224.5:c.1506C>T, NM_016224.4:c.1506C>T, XM_011535886.4:c.1224C>T, XM_011535886.3:c.1224C>T, XM_011535886.2:c.1224C>T, XM_011535886.1:c.1224C>T

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