Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX367946: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279368' containing sample 'Staphylococcus aureus M0819'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.1M spots, 821.5M bases, 350.4Mb downloads

UUID: 9299d72f-8e53-41aa-91ff-16e18f34ae59

Design: Illumina sequencing of Staphylococcus aureus M0819 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216775 • SRP031955 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0819

SAMN02325726 • SRS493995 • All experiments • All runs

Organism: Staphylococcus aureus M0819

Library:

Name: Pond-279368

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 396251.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4UWNQ

material_type: DNA:DNA Somatic

product_order: PDO-1837

product_part_number: P-WG-0004

project: G45317

research_project: RP-433

root_sample_id: SM-4CXFB

sample_id: SM-4UWNQ

work_request: 37670

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-11 17:00:05.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.1M spots, 821.5M bases, 350.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017103	2,034,142	410.9M	174.8Mb	2013-10-25
SRR1017104	2,032,643	410.6M	175.6Mb	2013-10-25

ID:: 526577

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