Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX422840: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-293493' containing sample 'Staphylococcus aureus W82303'
2 ILLUMINA (Illumina HiSeq 2000) runs: 6.1M spots, 1.2G bases, 624.1Mb downloads

UUID: e8bc933d-fd78-4fd1-9342-7b11826c00d2

Design: Illumina sequencing of Staphylococcus aureus W82303 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224503 • SRP035034 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus W82303

SAMN02383792 • SRS526890 • All experiments • All runs

Organism: Staphylococcus aureus W82303

Library:

Name: Pond-293493

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 433175.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:53J7W

material_type: DNA:DNA Somatic

product_order: PDO-2339

product_part_number: P-WG-0004

project: G50688

research_project: RP-509

root_sample_id: SM-4T4MG

sample_id: SM-53J7W

work_request: 38889

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-11 07:33:15.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 6.1M spots, 1.2G bases, 624.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1103443	2,999,760	606M	307.5Mb	2014-01-07
SRR1103513	3,085,168	623.2M	316.6Mb	2014-01-07

ID:: 598314

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity