Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX555788: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-311216' containing sample 'Tur-4'
1 ILLUMINA (Illumina HiSeq 2000) run: 7.2M spots, 1.5G bases, 660.4Mb downloads

UUID: 4d2c1951-f423-4ce4-9bd0-5e94a696ab7e

Design: Illumina sequencing of Staphylococcus aureus Tur-4 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA226508 • SRP042513 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus Tur-4

SAMN02391380 • SRS622871 • All experiments • All runs

Organism: Staphylococcus aureus Tur-4

Library:

Name: Pond-311216

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 447528.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:57GX1

material_type: DNA:DNA Somatic

product_order: PDO-2394

product_part_number: P-WG-0004

project: G51654

research_project: RP-513

root_sample_id: SM-4PAK3

sample_id: SM-57GX1

work_request: 39105

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-04 03:36:50.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 7.2M spots, 1.5G bases, 660.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303479	7,189,985	1.5G	660.4Mb	2014-05-30

ID:: 794816

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