A-Proteo-Rhodobac-SURF SCGC AC-669_G16 whole genome sequence - SRA

SRX19125443: A-Proteo-Rhodobac-SURF SCGC AC-669_G16 whole genome sequence
1 ILLUMINA (Illumina HiSeq 2000) run: 10.6M spots, 3.2G bases, 2.1Gb downloads

Design: Cell was sorted by flow cytometry into 384-well plates, then lysed with cold KOH and the whole genome was amplified with Multiple Displacement Amplification. Libraries for SAG genomic sequencing were created with Nextera XT (Illumina) reagents following manufacturers instructions, except for purification steps, which were done with column cleanup kits (QIAGEN).

Submitted by: University of California, San Diego

Study: marine oxygen minimum zones single-cell and community genomes Raw sequence reads

PRJNA393056 • SRP112624 • All experiments • All runs

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Single-cell and community genomic sequence data from the Pacific Ocean oxygen minimum zones.

Sample: Single-cell genome of A-Proteo-Rhodobac-SURF SCGC AC-669_G16

SAMN07314130 • SRS16524641 • All experiments • All runs

Organism: uncultured Rhodobacteraceae bacterium

Library:

Name: SCGC AC-669_G16

Instrument: Illumina HiSeq 2000

Strategy: WGA

Source: GENOMIC SINGLE CELL

Selection: MDA

Layout: PAIRED

Runs: 1 run, 10.6M spots, 3.2G bases, 2.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR23175000	10,625,933	3.2G	2.1Gb	2023-01-20

ID:: 26297921

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Sequence Read Archive

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