Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioProject

SRX360751: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-230559' containing sample 'ORNL_V42_C10'
7 ILLUMINA (Illumina HiSeq 2000) runs: 4.2M spots, 845.9M bases, 515.2Mb downloads

UUID: 4f1794a1-3757-4394-bd52-fe57aba221ff

Design: Illumina sequencing of Pelomonas sp. ORNL_6EZ5-Gt_4_Pl2-131 via random selection

Submitted by: Broad Institute (BI)

Study: HMP reference genome

PRJNA197057 • SRP030583 • All experiments • All runs

Sample: Generic sample from Pelomonas sp. ORNL_6EZ5-Gt_4_Pl2-131

SAMN00691593 • SRS255507 • All experiments • All runs

Organism: Pelomonas sp. ORNL_6EZ5-Gt_4_Pl2-131

Library:

Name: Pond-230559

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: WGS

gssr_id: 302694.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:41WM4

material_type: DNA:DNA Somatic

product_order: PDO-526

product_part_number: P-WG-0004

project: G32689

research_project: RP-129

root_sample_id: SM-3QFJM

sample_id: SM-41WM4

work_request: 35919

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-05-08 19:07:00.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 7 runs, 4.2M spots, 845.9M bases, 515.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1004022	594,128	120M	73Mb	2013-09-27
SRR1004023	594,550	120.1M	73.1Mb	2013-09-27
SRR1004024	605,662	122.3M	74.5Mb	2013-09-27
SRR1004025	597,657	120.7M	73.7Mb	2013-09-27
SRR1004026	597,703	120.7M	73.5Mb	2013-09-27
SRR1004027	595,371	120.3M	73.3Mb	2013-09-27
SRR1004028	602,499	121.7M	74.1Mb	2013-09-27

ID:: 509956

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioProject

Supplemental Content

Related information

Recent activity