Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX360747: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-230566' containing sample 'ORNL_W42_C11'
7 ILLUMINA (Illumina HiSeq 2000) runs: 14.5M spots, 2.9G bases, 1.8Gb downloads

UUID: dfc785b0-fb07-49b3-aae8-4ddf1cf49e9f

Design: Illumina sequencing of Pelomonas sp. ORNL_6EZ5-Gt_3_Pl1-30 via random selection

Submitted by: Broad Institute (BI)

Study: HMP reference genome

PRJNA197089 • SRP030580 • All experiments • All runs

Sample: Generic sample from Pelomonas sp. ORNL_6EZ5-Gt_3_Pl1-30

SAMN00706775 • SRS256239 • All experiments • All runs

Organism: Pelomonas sp. ORNL_6EZ5-Gt_3_Pl1-30

Library:

Name: Pond-230566

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: WGS

gssr_id: 302664.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:41WMB

material_type: DNA:DNA Somatic

product_order: PDO-526

product_part_number: P-WG-0004

project: G32660

research_project: RP-129

root_sample_id: SM-3QFIZ

sample_id: SM-41WMB

work_request: 35919

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-05-08 19:07:00.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 7 runs, 14.5M spots, 2.9G bases, 1.8Gb

Run	# of Spots	# of Bases	Size	Published
SRR1003994	2,062,242	416.6M	255.3Mb	2013-09-27
SRR1003995	2,076,670	419.5M	257.6Mb	2013-09-27
SRR1003996	2,076,624	419.5M	258Mb	2013-09-27
SRR1003997	2,073,041	418.8M	257.3Mb	2013-09-27
SRR1003998	2,051,803	414.5M	254.2Mb	2013-09-27
SRR1003999	2,111,938	426.6M	262Mb	2013-09-27
SRR1004000	2,084,040	421M	258.5Mb	2013-09-27

ID:: 509952

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