Whole genome shotgun sequencing of Salmonella enterica subsp. enteric... - SRA

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SRX497412: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN003473 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1.1M spots, 500.3M bases, 364.5Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: FOOD AND DRUG ADMINISTRATION, CENTER FOR FOOD SAFETY AND APPLIED NUTRITION (CFSAN)

Study: Foodborne Pathogen Survey

PRJNA214630 • SRP040412 • All experiments • All runs

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Genome Sequencing Project

Sample: Pathogen sample from Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN003473

SAMN02313951 • SRS579407 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN003473

Library:

Name: Salmonella enterica str. CFSAN003473 shotgun

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN003473.

Spot descriptor:

1 forward251 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.42

Runs: 1 run, 1.1M spots, 500.3M bases, 364.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1200646	1,051,548	500.3M	364.5Mb	2014-03-20

ID:: 687509

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