Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

Links from BioProject

SRX364305: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-275233' containing sample 'Staphylococcus aureus M0358'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.6M spots, 924.5M bases, 433Mb downloads

UUID: 273cb736-4f4b-4441-b860-c9275b85752a

Design: Illumina sequencing of Staphylococcus aureus M0358 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216408 • SRP031152 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0358

SAMN02325362 • SRS490723 • All experiments • All runs

Organism: Staphylococcus aureus M0358

Library:

Name: Pond-275233

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 385915.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RJPX

material_type: DNA:DNA Somatic

product_order: PDO-1798

product_part_number: P-WG-0004

project: G44783

research_project: RP-433

root_sample_id: SM-4CUMT

sample_id: SM-4RJPX

work_request: 37547

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-04 02:35:40.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 2 runs, 4.6M spots, 924.5M bases, 433Mb

Run	# of Spots	# of Bases	Size	Published
SRR1011753	2,327,753	470.2M	221.4Mb	2013-10-16
SRR1011754	2,249,010	454.3M	211.6Mb	2013-10-16

ID:: 521123

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioProject

Supplemental Content

Related information

Recent activity