Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX364343: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-275845' containing sample 'Staphylococcus aureus M0410'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.9M spots, 579.6M bases, 244.1Mb downloads

UUID: 936d3255-9d3d-4c77-8b1e-4c3d6bce3af6

Design: Illumina sequencing of Staphylococcus aureus M0410 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216441 • SRP031190 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0410

SAMN02325395 • SRS490761 • All experiments • All runs

Organism: Staphylococcus aureus M0410

Library:

Name: Pond-275845

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 386028.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4RJT6

material_type: DNA:DNA Somatic

product_order: PDO-1799

product_part_number: P-WG-0004

project: G44988

research_project: RP-433

root_sample_id: SM-4CYIN

sample_id: SM-4RJT6

work_request: 37548

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-10 22:09:59.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.9M spots, 579.6M bases, 244.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1011829	1,430,694	289M	122.2Mb	2013-10-16
SRR1011830	1,438,808	290.6M	121.9Mb	2013-10-16

ID:: 521161

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