Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX363652: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-277989' containing sample 'Staphylococcus aureus M0939'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.2M spots, 857.6M bases, 389.7Mb downloads

UUID: e35bbb6e-81b9-4aa7-baa1-b5b482d38d2c

Design: Illumina sequencing of Staphylococcus aureus M0939 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216878 • SRP030925 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0939

SAMN02325829 • SRS490281 • All experiments • All runs

Organism: Staphylococcus aureus M0939

Library:

Name: Pond-277989

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 394135.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4T89A

material_type: DNA:DNA Somatic

product_order: PDO-1930

product_part_number: P-WG-0004

project: G46127

research_project: RP-433

root_sample_id: SM-4C9MZ

sample_id: SM-4T89A

work_request: 37963

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 16:23:41.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.2M spots, 857.6M bases, 389.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1010775	2,149,386	434.2M	197Mb	2013-10-09
SRR1010776	2,096,377	423.5M	192.6Mb	2013-10-09

ID:: 516089

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