Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX368161: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-279972' containing sample 'Staphylococcus aureus M1453'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.8M spots, 774.7M bases, 366.7Mb downloads

UUID: 801d4f81-8b1f-4b4f-8b65-320a9cc7732b

Design: Illumina sequencing of Staphylococcus aureus M1453 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA218439 • SRP032143 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1453

SAMN02350618 • SRS494202 • All experiments • All runs

Organism: Staphylococcus aureus M1453

Library:

Name: Pond-279972

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 402424.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4VJP3

material_type: DNA:DNA Somatic

product_order: PDO-2038

product_part_number: P-WG-0004

project: G47902

research_project: RP-433

root_sample_id: SM-4CWA3

sample_id: SM-4VJP3

work_request: 38135

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-14 15:58:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.8M spots, 774.7M bases, 366.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1017441	1,916,888	387.2M	183.1Mb	2013-10-25
SRR1017442	1,918,373	387.5M	183.6Mb	2013-10-25

ID:: 526792

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