Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX375579: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-281324' containing sample 'Staphylococcus aureus M1181'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.1M spots, 1G bases, 453.5Mb downloads

UUID: 075b3dca-a8c5-4365-9c60-76d11a6074ac

Design: Illumina sequencing of Staphylococcus aureus M1181 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA220040 • SRP032893 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1181

SAMN02360847 • SRS501286 • All experiments • All runs

Organism: Staphylococcus aureus M1181

Library:

Name: Pond-281324

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 407732.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WBHN

material_type: DNA:DNA Somatic

product_order: PDO-2122

product_part_number: P-WG-0004

project: G48534

research_project: RP-433

root_sample_id: SM-4CVV3

sample_id: SM-4WBHN

work_request: 38311

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-04 13:06:09.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.1M spots, 1G bases, 453.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1028111	2,521,902	509.4M	221.9Mb	2013-11-11
SRR1043854	2,604,217	526.1M	231.6Mb	2013-12-05

ID:: 537475

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