Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX375603: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-281263' containing sample 'Staphylococcus aureus M1333'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5M spots, 1G bases, 484.9Mb downloads

UUID: dd61bfe6-7b8f-4515-8347-2ae338b515be

Design: Illumina sequencing of Staphylococcus aureus M1333 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA220161 • SRP032916 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1333

SAMN02360968 • SRS501308 • All experiments • All runs

Organism: Staphylococcus aureus M1333

Library:

Name: Pond-281263

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 407670.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WBFV

material_type: DNA:DNA Somatic

product_order: PDO-2122

product_part_number: P-WG-0004

project: G48473

research_project: RP-433

root_sample_id: SM-4CQPR

sample_id: SM-4WBFV

work_request: 38311

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-04 13:06:09.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5M spots, 1G bases, 484.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1028146	2,440,774	493M	236.6Mb	2013-11-11
SRR1043907	2,536,094	512.3M	248.3Mb	2013-12-05

ID:: 537499

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