Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX392426: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-286533' containing sample 'Staphylococcus aureus WMCA6025'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.8M spots, 974.7M bases, 457.6Mb downloads

UUID: 2145e9c5-fde2-45cb-b58d-9c11133d663c

Design: Illumina sequencing of Staphylococcus aureus WMCA6025 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Orange County

PRJNA223937 • SRP034425 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus WMCA6025

SAMN02381678 • SRS515530 • All experiments • All runs

Organism: Staphylococcus aureus WMCA6025

Library:

Name: Pond-286533

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 417963.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4YLYT

material_type: DNA:DNA Somatic

product_order: PDO-2265

product_part_number: P-WG-0004

project: G49900

research_project: RP-493

root_sample_id: SM-4T2HM

sample_id: SM-4YLYT

work_request: 38773

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-13 00:20:32.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.8M spots, 974.7M bases, 457.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1050498	2,410,086	486.8M	228.1Mb	2013-12-16
SRR1050499	2,415,301	487.9M	229.5Mb	2013-12-16

ID:: 563273

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