Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

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SRX422918: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-293555' containing sample 'Staphylococcus aureus M13316'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5M spots, 1G bases, 526.7Mb downloads

UUID: 69bc0b64-536c-4bf5-8cb7-cf23b0741b62

Design: Illumina sequencing of Staphylococcus aureus M13316 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA224344 • SRP035103 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M13316

SAMN02383634 • SRS526959 • All experiments • All runs

Organism: Staphylococcus aureus M13316

Library:

Name: Pond-293555

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 433237.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:53J9O

material_type: DNA:DNA Somatic

product_order: PDO-2339

product_part_number: P-WG-0004

project: G50720

research_project: RP-509

root_sample_id: SM-4T4SW

sample_id: SM-53J9O

work_request: 38889

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-11 07:33:15.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5M spots, 1G bases, 526.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1103557	2,554,701	516M	266.6Mb	2014-01-07
SRR1103559	2,493,657	503.7M	260.1Mb	2014-01-07

ID:: 598392

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